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LOCUS XM_070218273 2840 bp mRNA linear INV 09-DEC-2024 (Ptpmeg2), transcript variant X4, mRNA. ACCESSION XM_070218273 VERSION XM_070218273.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2840 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2840 /gene="Ptpmeg2" /note="Protein tyrosine phosphatase Meg2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:108068039" CDS 66..2462 /gene="Ptpmeg2" /codon_start=1 /product="tyrosine-protein phosphatase non-receptor type 9 isoform X4" /protein_id="XP_070074374.1" /db_xref="GeneID:108068039" /translation="MEEQEFAVKQFIDLCNNLGANCSTTTATSPSASSSSASSTQNLI AVVPPLPAHPQQLQVQLPAAPGDGGDGGGGGGAVPVRRHISHTTAVKFLYARKFDIPR AVSLYEQHEQIRLKEYLYNIDPDVEPLRSELQTGKFTILPARTSSGAAIALFTANRHS PLCVSHTTTLQGIVYQLDSALQDSETQRAGLVFIYDMSGSKYSNFDYDLSQKILTLLK GGYPARLKKVLIVTAPLWFKAPFKILRLFVREKLRERVFTVSVPQLALHVPRKALPIH LGGTLEVDHATWLLSCRQSMTNREDELLANIVGVGVGGGGSGSATNGTTDPAATDTAA TTTVGATIISAVHQLGDNNTTVVTVSNGVGPAGLAGGGAAGAAASAEPNENITINGLS PSHRSSSSSSNATATAANPLKLNTSGAADSSSSNTIAAGAAGGAAGAAAVASNTTTTT TTTNGGGNEFWSENPPSSASSGFSDDDSLAGQEGDPKPIDQIVQMVKQRGRHGLIKEY ADIRNRAPEGTFLHARMRANLTKNRYTDVLCYDHSRVVLANEDGDEPSDYINANFVDG YKQKNAYISTQGPLPKTSQDFWRMIWEQHCLVIVMTTRVMERGRVKCGQYWEPTEESS LEFGDYHVRTISVECNEDYMVASLELRNIKTDEIRNVSHWQFTSWPDYGVPSSAMAML NFLQKVREKQAQLVHGLGDTWAGHARGPPIVVHCSAGIGRTGTFITLDICISRLEDVG TADIRGTVEKIRSQRAYSIQMPDQYVFCHLALIEYAYSRGMLQTVDLAGFDEREQDSE " misc_feature <303..395 /gene="Ptpmeg2" /note="CRAL/TRIO, N-terminal domain; Region: CRAL_TRIO_N; smart01100" /db_xref="CDD:215024" misc_feature 471..905 /gene="Ptpmeg2" /note="Sec14p-like lipid-binding domain; Region: SEC14; cd00170" /db_xref="CDD:469559" misc_feature 1563..2375 /gene="Ptpmeg2" /note="catalytic domain of tyrosine-protein phosphatase non-receptor type 9; Region: PTPc-N9; cd14543" /db_xref="CDD:350391" polyA_site 2840 /gene="Ptpmeg2" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgcaaagttt ccgaaacaca aatcaatcga tgtttccatc gccgctcgcc cacttctagc 61 aaaaaatgga ggaacaagaa ttcgctgtga aacaattcat tgatctctgc aacaacctgg 121 gtgctaactg cagcacgacg acagccacat ccccgtcagc ttcctcctcc tcggcgagca 181 gtacgcagaa cttgatagca gttgtgccgc cgctgccagc acatccacag cagctgcagg 241 tgcaattacc ggcggcgcca ggagatggag gtgatggagg gggaggtgga ggggcggtgc 301 ccgtgaggcg ccacatctcg catacgacag ccgtcaaatt tctgtacgcc cgtaaattcg 361 atataccgcg agcggtctca ctgtacgagc agcatgaaca gatccgcctg aaggagtatc 421 tctataacat cgatcccgat gtggagccct tgcgttccga gctgcagacc ggcaagttta 481 ccatcctgcc tgcacgcacc tccagcgggg ccgccatcgc cctgttcacc gccaatcggc 541 acagtccgct gtgcgtttcg cacacgacca cgctgcaggg catcgtctat cagctggaca 601 gtgcgctcca ggattcggaa acccagcgcg cgggactcgt cttcatctac gacatgagcg 661 gctccaagta ctcgaacttt gactacgacc tctcccagaa gattctcacg ctgctcaagg 721 gcggctatcc ggcgcgtcta aagaaggtcc ttatcgtgac ggcgccgctt tggttcaagg 781 cacccttcaa gatcctccgg ctgtttgtgc gcgagaagct gcgcgagcga gtgttcactg 841 tatcggtgcc ccagttggcg ctgcacgtgc cgcgcaaggc gctgcccatt cacttgggtg 901 gcacgctgga ggtcgatcac gccacatggt tgctcagctg ccgccaatcg atgacgaatc 961 gtgaggacga gctgctggcg aatatcgtgg gtgtgggtgt gggtggagga ggatctggtt 1021 ctgctacaaa tggcacaacg gatcctgcag caacggatac cgcggcaaca acaacggtgg 1081 gagccacgat aatcagtgcc gtccaccagc tgggcgataa caataccacc gtggtgacgg 1141 tcagcaatgg agtgggtcca gctggattgg caggaggagg agcagcagga gcagcagcat 1201 cagcggagcc caacgaaaac atcacaatca acggactgag tcccagccac cgcagtagca 1261 gcagcagcag caacgccaca gccacagcgg ccaatcccct caagctcaac acgagtggtg 1321 cggcggacag cagtagcagc aacacaatag cagcaggagc agcgggagga gcagctggag 1381 cagcagcagt tgctagcaat accaccacca caactacaac caccaacgga ggaggcaacg 1441 agttctggtc ggagaatcca cccagcagcg cctcctccgg attcagtgac gacgacagtc 1501 tggccggcca ggagggcgat cccaagccca tcgatcagat tgtccagatg gtcaagcagc 1561 gcggacgcca tgggttgatc aaggagtacg cggacatacg gaatagggcg cccgagggca 1621 ccttcctcca tgcgaggatg cgcgccaatc tgaccaagaa tcgctacaca gacgtcctct 1681 gctacgatca cagtcgagtg gtgctggcca acgaggacgg cgacgagccg tcggattata 1741 taaatgcgaa tttcgtcgat ggctacaaac agaagaatgc ctatatttca actcaaggtc 1801 cattaccaaa gacatcccag gacttttggc gcatgatctg ggagcaacat tgtttagtta 1861 tagtgatgac gacgcgcgtt atggagcgcg gacgcgttaa atgcggccag tactgggagc 1921 cgactgaaga aagttcctta gagtttggcg actaccatgt gcgaacaatt agcgttgagt 1981 gcaacgagga ctatatggtt gcctcgttgg aattgagaaa cattaagact gacgaaattc 2041 gcaatgtctc acattggcag ttcaccagct ggccggacta tggggtgccc agctcggcca 2101 tggccatgct gaactttctg cagaaggtgc gcgagaagca ggcgcagctg gtccacggac 2161 tgggcgacac ctgggcgggc catgcccgcg gaccgcccat tgtggtgcac tgcagtgcag 2221 gcattggacg tacaggcaca ttcatcaccc tggacatttg catatcgcgc ctggaggatg 2281 tgggcacggc ggatatacgc ggcactgtgg agaagatccg atcgcagcgc gcctactcca 2341 tccagatgcc cgatcagtat gtgttctgcc atttggccct catcgagtat gcctactcgc 2401 gcggaatgct gcagaccgtc gatctggccg gcttcgatga gcgcgaacag gattcggagt 2461 agattagggg gagaaaccga taaatggacg agaaaacaac ttgtatacag aataatttta 2521 tgttttacct ttgctaaaaa ttggagttgt aacctttttc caactagatg ttcgtcctga 2581 tatgatatga tatgatataa tatatgatat atgtgtatga tgatgcaagg agaatggaga 2641 atggattccg gacgaggcga gacgagagag tagagtaaca aatttacgtt aatctattat 2701 ttttttttta aatattatta cataccaagc tatagttgta tagcaaaaac atctatatat 2761 ataaacatta tttaaattaa atttaaacta aatgaaaaac aaatagctaa aaataaagaa 2821 gaaacctaaa agaaaaacaa