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LOCUS XM_070218271 3035 bp mRNA linear INV 09-DEC-2024 (Ptpmeg2), transcript variant X2, mRNA. ACCESSION XM_070218271 VERSION XM_070218271.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3035 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3035 /gene="Ptpmeg2" /note="Protein tyrosine phosphatase Meg2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins" /db_xref="GeneID:108068039" CDS 165..2657 /gene="Ptpmeg2" /codon_start=1 /product="tyrosine-protein phosphatase non-receptor type 9 isoform X2" /protein_id="XP_070074372.1" /db_xref="GeneID:108068039" /translation="MQRTHWNKDKPEDKNNNSGSRSEQDSGCHQRLFLCFAKAVKQFI DLCNNLGANCSTTTATSPSASSSSASSTQNLIAVVPPLPAHPQQLQVQLPAAPGDGGD GGGGGGAVPVRRHISHTTAVKFLYARKFDIPRAVSLYEQHEQIRLKEYLYNIDPDVEP LRSELQTGKFTILPARTSSGAAIALFTANRHSPLCVSHTTTLQGIVYQLDSALQDSET QRAGLVFIYDMSGSKYSNFDYDLSQKILTLLKGGYPARLKKVLIVTAPLWFKAPFKIL RLFVREKLRERVFTVSVPQLALHVPRKALPIHLGGTLEVDHATWLLSCRQSMTNREDE LLANIVGVGVGGGGSGSATNGTTDPAATDTAATTTVGATIISAVHQLGDNNTTVVTVS NGVGPAGLAGGGAAGAAASAEPNENITINGLSPSHRSSSSSSNATATAANPLKLNTSG AADSSSSNTIAAGAAGGAAGAAAVASNTTTTTTTTNGGGNEFWSENPPSSASSGFSDD DSLAGQEGDPKPIDQIVQMVKQRGRHGLIKEYADIRNRAPEGTFLHARMRANLTKNRY TDVLCYDHSRVVLANEDGDEPSDYINANFVDGYKQKNAYISTQGPLPKTSQDFWRMIW EQHCLVIVMTTRVMERGRVKCGQYWEPTEESSLEFGDYHVRTISVECNEDYMVASLEL RNIKTDEIRNVSHWQFTSWPDYGVPSSAMAMLNFLQKVREKQAQLVHGLGDTWAGHAR GPPIVVHCSAGIGRTGTFITLDICISRLEDVGTADIRGTVEKIRSQRAYSIQMPDQYV FCHLALIEYAYSRGMLQTVDLAGFDEREQDSE" misc_feature <498..590 /gene="Ptpmeg2" /note="CRAL/TRIO, N-terminal domain; Region: CRAL_TRIO_N; smart01100" /db_xref="CDD:215024" misc_feature 666..1100 /gene="Ptpmeg2" /note="Sec14p-like lipid-binding domain; Region: SEC14; cd00170" /db_xref="CDD:469559" misc_feature 1758..2570 /gene="Ptpmeg2" /note="catalytic domain of tyrosine-protein phosphatase non-receptor type 9; Region: PTPc-N9; cd14543" /db_xref="CDD:350391" polyA_site 3035 /gene="Ptpmeg2" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgtcagtcgc cgcgcgttca tctcgtctca tccatccatc cgcctcgtgc gttcgcgtcg 61 cttcgctgtg atgtggaatt aaactattat tatttattta tttgtttttg tgtgtgcaat 121 atagagctcg ttctgctgtt cgtgtgtgag aaaaatgcat caaaatgcag cgaacgcatt 181 ggaataagga caagccggag gataagaaca acaacagtgg cagtaggagc gagcaggata 241 gcggctgtca tcagcgtctc ttcctgtgct ttgccaaggc tgtgaaacaa ttcattgatc 301 tctgcaacaa cctgggtgct aactgcagca cgacgacagc cacatccccg tcagcttcct 361 cctcctcggc gagcagtacg cagaacttga tagcagttgt gccgccgctg ccagcacatc 421 cacagcagct gcaggtgcaa ttaccggcgg cgccaggaga tggaggtgat ggagggggag 481 gtggaggggc ggtgcccgtg aggcgccaca tctcgcatac gacagccgtc aaatttctgt 541 acgcccgtaa attcgatata ccgcgagcgg tctcactgta cgagcagcat gaacagatcc 601 gcctgaagga gtatctctat aacatcgatc ccgatgtgga gcccttgcgt tccgagctgc 661 agaccggcaa gtttaccatc ctgcctgcac gcacctccag cggggccgcc atcgccctgt 721 tcaccgccaa tcggcacagt ccgctgtgcg tttcgcacac gaccacgctg cagggcatcg 781 tctatcagct ggacagtgcg ctccaggatt cggaaaccca gcgcgcggga ctcgtcttca 841 tctacgacat gagcggctcc aagtactcga actttgacta cgacctctcc cagaagattc 901 tcacgctgct caagggcggc tatccggcgc gtctaaagaa ggtccttatc gtgacggcgc 961 cgctttggtt caaggcaccc ttcaagatcc tccggctgtt tgtgcgcgag aagctgcgcg 1021 agcgagtgtt cactgtatcg gtgccccagt tggcgctgca cgtgccgcgc aaggcgctgc 1081 ccattcactt gggtggcacg ctggaggtcg atcacgccac atggttgctc agctgccgcc 1141 aatcgatgac gaatcgtgag gacgagctgc tggcgaatat cgtgggtgtg ggtgtgggtg 1201 gaggaggatc tggttctgct acaaatggca caacggatcc tgcagcaacg gataccgcgg 1261 caacaacaac ggtgggagcc acgataatca gtgccgtcca ccagctgggc gataacaata 1321 ccaccgtggt gacggtcagc aatggagtgg gtccagctgg attggcagga ggaggagcag 1381 caggagcagc agcatcagcg gagcccaacg aaaacatcac aatcaacgga ctgagtccca 1441 gccaccgcag tagcagcagc agcagcaacg ccacagccac agcggccaat cccctcaagc 1501 tcaacacgag tggtgcggcg gacagcagta gcagcaacac aatagcagca ggagcagcgg 1561 gaggagcagc tggagcagca gcagttgcta gcaataccac caccacaact acaaccacca 1621 acggaggagg caacgagttc tggtcggaga atccacccag cagcgcctcc tccggattca 1681 gtgacgacga cagtctggcc ggccaggagg gcgatcccaa gcccatcgat cagattgtcc 1741 agatggtcaa gcagcgcgga cgccatgggt tgatcaagga gtacgcggac atacggaata 1801 gggcgcccga gggcaccttc ctccatgcga ggatgcgcgc caatctgacc aagaatcgct 1861 acacagacgt cctctgctac gatcacagtc gagtggtgct ggccaacgag gacggcgacg 1921 agccgtcgga ttatataaat gcgaatttcg tcgatggcta caaacagaag aatgcctata 1981 tttcaactca aggtccatta ccaaagacat cccaggactt ttggcgcatg atctgggagc 2041 aacattgttt agttatagtg atgacgacgc gcgttatgga gcgcggacgc gttaaatgcg 2101 gccagtactg ggagccgact gaagaaagtt ccttagagtt tggcgactac catgtgcgaa 2161 caattagcgt tgagtgcaac gaggactata tggttgcctc gttggaattg agaaacatta 2221 agactgacga aattcgcaat gtctcacatt ggcagttcac cagctggccg gactatgggg 2281 tgcccagctc ggccatggcc atgctgaact ttctgcagaa ggtgcgcgag aagcaggcgc 2341 agctggtcca cggactgggc gacacctggg cgggccatgc ccgcggaccg cccattgtgg 2401 tgcactgcag tgcaggcatt ggacgtacag gcacattcat caccctggac atttgcatat 2461 cgcgcctgga ggatgtgggc acggcggata tacgcggcac tgtggagaag atccgatcgc 2521 agcgcgccta ctccatccag atgcccgatc agtatgtgtt ctgccatttg gccctcatcg 2581 agtatgccta ctcgcgcgga atgctgcaga ccgtcgatct ggccggcttc gatgagcgcg 2641 aacaggattc ggagtagatt agggggagaa accgataaat ggacgagaaa acaacttgta 2701 tacagaataa ttttatgttt tacctttgct aaaaattgga gttgtaacct ttttccaact 2761 agatgttcgt cctgatatga tatgatatga tataatatat gatatatgtg tatgatgatg 2821 caaggagaat ggagaatgga ttccggacga ggcgagacga gagagtagag taacaaattt 2881 acgttaatct attatttttt ttttaaatat tattacatac caagctatag ttgtatagca 2941 aaaacatcta tatatataaa cattatttaa attaaattta aactaaatga aaaacaaata 3001 gctaaaaata aagaagaaac ctaaaagaaa aacaa