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LOCUS XM_070218270 3053 bp mRNA linear INV 09-DEC-2024 (Ptpmeg2), transcript variant X1, mRNA. ACCESSION XM_070218270 VERSION XM_070218270.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3053 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3053 /gene="Ptpmeg2" /note="Protein tyrosine phosphatase Meg2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:108068039" CDS 165..2675 /gene="Ptpmeg2" /codon_start=1 /product="tyrosine-protein phosphatase non-receptor type 9 isoform X1" /protein_id="XP_070074371.1" /db_xref="GeneID:108068039" /translation="MQRTHWNKDKPEDKNNNSGSRSEQDSGCHQRLFLCFAKVCESVC AVKQFIDLCNNLGANCSTTTATSPSASSSSASSTQNLIAVVPPLPAHPQQLQVQLPAA PGDGGDGGGGGGAVPVRRHISHTTAVKFLYARKFDIPRAVSLYEQHEQIRLKEYLYNI DPDVEPLRSELQTGKFTILPARTSSGAAIALFTANRHSPLCVSHTTTLQGIVYQLDSA LQDSETQRAGLVFIYDMSGSKYSNFDYDLSQKILTLLKGGYPARLKKVLIVTAPLWFK APFKILRLFVREKLRERVFTVSVPQLALHVPRKALPIHLGGTLEVDHATWLLSCRQSM TNREDELLANIVGVGVGGGGSGSATNGTTDPAATDTAATTTVGATIISAVHQLGDNNT TVVTVSNGVGPAGLAGGGAAGAAASAEPNENITINGLSPSHRSSSSSSNATATAANPL KLNTSGAADSSSSNTIAAGAAGGAAGAAAVASNTTTTTTTTNGGGNEFWSENPPSSAS SGFSDDDSLAGQEGDPKPIDQIVQMVKQRGRHGLIKEYADIRNRAPEGTFLHARMRAN LTKNRYTDVLCYDHSRVVLANEDGDEPSDYINANFVDGYKQKNAYISTQGPLPKTSQD FWRMIWEQHCLVIVMTTRVMERGRVKCGQYWEPTEESSLEFGDYHVRTISVECNEDYM VASLELRNIKTDEIRNVSHWQFTSWPDYGVPSSAMAMLNFLQKVREKQAQLVHGLGDT WAGHARGPPIVVHCSAGIGRTGTFITLDICISRLEDVGTADIRGTVEKIRSQRAYSIQ MPDQYVFCHLALIEYAYSRGMLQTVDLAGFDEREQDSE" misc_feature <516..608 /gene="Ptpmeg2" /note="CRAL/TRIO, N-terminal domain; Region: CRAL_TRIO_N; smart01100" /db_xref="CDD:215024" misc_feature 684..1118 /gene="Ptpmeg2" /note="Sec14p-like lipid-binding domain; Region: SEC14; cd00170" /db_xref="CDD:469559" misc_feature 1776..2588 /gene="Ptpmeg2" /note="catalytic domain of tyrosine-protein phosphatase non-receptor type 9; Region: PTPc-N9; cd14543" /db_xref="CDD:350391" polyA_site 3053 /gene="Ptpmeg2" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgtcagtcgc cgcgcgttca tctcgtctca tccatccatc cgcctcgtgc gttcgcgtcg 61 cttcgctgtg atgtggaatt aaactattat tatttattta tttgtttttg tgtgtgcaat 121 atagagctcg ttctgctgtt cgtgtgtgag aaaaatgcat caaaatgcag cgaacgcatt 181 ggaataagga caagccggag gataagaaca acaacagtgg cagtaggagc gagcaggata 241 gcggctgtca tcagcgtctc ttcctgtgct ttgccaaggt gtgtgaaagt gtgtgtgctg 301 tgaaacaatt cattgatctc tgcaacaacc tgggtgctaa ctgcagcacg acgacagcca 361 catccccgtc agcttcctcc tcctcggcga gcagtacgca gaacttgata gcagttgtgc 421 cgccgctgcc agcacatcca cagcagctgc aggtgcaatt accggcggcg ccaggagatg 481 gaggtgatgg agggggaggt ggaggggcgg tgcccgtgag gcgccacatc tcgcatacga 541 cagccgtcaa atttctgtac gcccgtaaat tcgatatacc gcgagcggtc tcactgtacg 601 agcagcatga acagatccgc ctgaaggagt atctctataa catcgatccc gatgtggagc 661 ccttgcgttc cgagctgcag accggcaagt ttaccatcct gcctgcacgc acctccagcg 721 gggccgccat cgccctgttc accgccaatc ggcacagtcc gctgtgcgtt tcgcacacga 781 ccacgctgca gggcatcgtc tatcagctgg acagtgcgct ccaggattcg gaaacccagc 841 gcgcgggact cgtcttcatc tacgacatga gcggctccaa gtactcgaac tttgactacg 901 acctctccca gaagattctc acgctgctca agggcggcta tccggcgcgt ctaaagaagg 961 tccttatcgt gacggcgccg ctttggttca aggcaccctt caagatcctc cggctgtttg 1021 tgcgcgagaa gctgcgcgag cgagtgttca ctgtatcggt gccccagttg gcgctgcacg 1081 tgccgcgcaa ggcgctgccc attcacttgg gtggcacgct ggaggtcgat cacgccacat 1141 ggttgctcag ctgccgccaa tcgatgacga atcgtgagga cgagctgctg gcgaatatcg 1201 tgggtgtggg tgtgggtgga ggaggatctg gttctgctac aaatggcaca acggatcctg 1261 cagcaacgga taccgcggca acaacaacgg tgggagccac gataatcagt gccgtccacc 1321 agctgggcga taacaatacc accgtggtga cggtcagcaa tggagtgggt ccagctggat 1381 tggcaggagg aggagcagca ggagcagcag catcagcgga gcccaacgaa aacatcacaa 1441 tcaacggact gagtcccagc caccgcagta gcagcagcag cagcaacgcc acagccacag 1501 cggccaatcc cctcaagctc aacacgagtg gtgcggcgga cagcagtagc agcaacacaa 1561 tagcagcagg agcagcggga ggagcagctg gagcagcagc agttgctagc aataccacca 1621 ccacaactac aaccaccaac ggaggaggca acgagttctg gtcggagaat ccacccagca 1681 gcgcctcctc cggattcagt gacgacgaca gtctggccgg ccaggagggc gatcccaagc 1741 ccatcgatca gattgtccag atggtcaagc agcgcggacg ccatgggttg atcaaggagt 1801 acgcggacat acggaatagg gcgcccgagg gcaccttcct ccatgcgagg atgcgcgcca 1861 atctgaccaa gaatcgctac acagacgtcc tctgctacga tcacagtcga gtggtgctgg 1921 ccaacgagga cggcgacgag ccgtcggatt atataaatgc gaatttcgtc gatggctaca 1981 aacagaagaa tgcctatatt tcaactcaag gtccattacc aaagacatcc caggactttt 2041 ggcgcatgat ctgggagcaa cattgtttag ttatagtgat gacgacgcgc gttatggagc 2101 gcggacgcgt taaatgcggc cagtactggg agccgactga agaaagttcc ttagagtttg 2161 gcgactacca tgtgcgaaca attagcgttg agtgcaacga ggactatatg gttgcctcgt 2221 tggaattgag aaacattaag actgacgaaa ttcgcaatgt ctcacattgg cagttcacca 2281 gctggccgga ctatggggtg cccagctcgg ccatggccat gctgaacttt ctgcagaagg 2341 tgcgcgagaa gcaggcgcag ctggtccacg gactgggcga cacctgggcg ggccatgccc 2401 gcggaccgcc cattgtggtg cactgcagtg caggcattgg acgtacaggc acattcatca 2461 ccctggacat ttgcatatcg cgcctggagg atgtgggcac ggcggatata cgcggcactg 2521 tggagaagat ccgatcgcag cgcgcctact ccatccagat gcccgatcag tatgtgttct 2581 gccatttggc cctcatcgag tatgcctact cgcgcggaat gctgcagacc gtcgatctgg 2641 ccggcttcga tgagcgcgaa caggattcgg agtagattag ggggagaaac cgataaatgg 2701 acgagaaaac aacttgtata cagaataatt ttatgtttta cctttgctaa aaattggagt 2761 tgtaaccttt ttccaactag atgttcgtcc tgatatgata tgatatgata taatatatga 2821 tatatgtgta tgatgatgca aggagaatgg agaatggatt ccggacgagg cgagacgaga 2881 gagtagagta acaaatttac gttaatctat tatttttttt ttaaatatta ttacatacca 2941 agctatagtt gtatagcaaa aacatctata tatataaaca ttatttaaat taaatttaaa 3001 ctaaatgaaa aacaaatagc taaaaataaa gaagaaacct aaaagaaaaa caa