PREDICTED: Drosophila takahashii L(3)mbt interactor in ovarian

LOCUS       XM_070218268            1525 bp    mRNA    linear   INV 09-DEC-2024
            somatic cells (Lint-O), transcript variant X2, mRNA.
ACCESSION   XM_070218268
VERSION     XM_070218268.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1525
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1525
                     /gene="Lint-O"
                     /note="L(3)mbt interactor in ovarian somatic cells;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon."
                     /db_xref="GeneID:108065683"
     CDS             161..1015
                     /gene="Lint-O"
                     /codon_start=1
                     /product="nucleolar protein 58 isoform X2"
                     /protein_id="XP_070074369.1"
                     /db_xref="GeneID:108065683"
                     /translation="MARKKYKCEKCRYCQVCNVRGRDLAICSSCVEAYHADCNDPTIK
                     QSKSVDTNPKWKCFRCEASGNSGNNTSPSSEEQAGGRKSNASREEQPAVPRKSNAGRK
                     KRVQSDPTGQEKPAKIEKLGKRSPPLKTDEKREKREEKKESKEEKKEELLEQPAEVKV
                     EKVEKQEEIEPVPENKNQPEPNQEAEPSRLSPPPPAAAGSPVDIKCQPVSTWSVEQVV
                     GFVAKHYPKEANVFRYQDIDGASLLLLTRQDVMNGFGLKLGPALRVFELVMSLQSRSD
                     DVRLAWFE"
     misc_feature    191..340
                     /gene="Lint-O"
                     /note="PHD finger superfamily; Region: PHD_SF; cd15489"
                     /db_xref="CDD:276966"
     misc_feature    order(230..241,251..253,323..325)
                     /gene="Lint-O"
                     /note="histone H3 binding site [polypeptide binding];
                     other site"
                     /db_xref="CDD:276966"
     misc_feature    785..988
                     /gene="Lint-O"
                     /note="SAM (Sterile alpha motif); Region: SAM_superfamily;
                     cl15755"
                     /db_xref="CDD:472832"
     polyA_site      1525
                     /gene="Lint-O"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cggtacttac gtcatatatg acagaataca aaaccagttg agtagtgatt tataggattt
       61 ttttaaaacg aagttttcgg ttttaaggtc ataactggca aaatataaca gttgaatagg
      121 gcactttccg tgtctcccag ttcacttcca gaaccaaagc atggcccgca agaagtacaa
      181 gtgcgaaaag tgccgctact gccaggtgtg caacgtgagg ggccgggatc tcgccatttg
      241 cagctcctgc gtggaggcct accatgcgga ctgcaatgat cccaccatca agcagagcaa
      301 atccgtcgac acaaatccca agtggaagtg cttccgatgc gaggcatccg gtaatagcgg
      361 taataacacc agcccgtcca gcgaggagca agcggggggc aggaaatcga atgcgagccg
      421 cgaggagcag ccggcggtgc ccaggaaatc caatgcgggc cgcaagaagc gcgtccaatc
      481 cgatcccacc ggtcaagaga agccggcgaa gattgagaag ctgggcaaac gcagtccgcc
      541 actgaaaact gacgagaaaa gagagaagag ggaggaaaag aaggaaagca aggaggagaa
      601 gaaggaggag ctgctggaac aaccagctga ggtcaaggtg gagaaagtcg agaagcagga
      661 ggagattgag cctgtgccgg agaataagaa tcagccggag cccaatcagg aagcggaacc
      721 ctcgcgcctt tcgccaccgc cacctgcagc tgccggcagt cccgtggaca ttaagtgcca
      781 gcccgtttcc acctggtccg tggaacaggt cgtcggcttt gtggccaagc actatccaaa
      841 ggaggcgaac gtgttccgct accaggacat cgacggcgcc tccctgctgc tgctcacccg
      901 ccaggatgtg atgaacggat tcggcctgaa gctgggaccg gcgctgcgcg tcttcgagct
      961 ggtgatgtcc ctgcagagtc gctccgatga cgtgagactc gcctggttcg agtagcgtcc
     1021 ccaccacctc tttagcatct aacaccactg taattttaat ttaatactct cgtttggagc
     1081 cctcgctcat ccggtcgcaa ccaataaagc ttatattaag tcttctcttc tgccggatga
     1141 cttcaatttc gttccagttt ttaagatgtt tttttctgta atcctacact cttgcaaatg
     1201 cacatacttt gtaaatgata tctgctagat ttgcaaaaaa taatacgact tttatttaaa
     1261 tacctcttaa tgagtggaaa gccaaaagtt tcgcagttta ttgacgggaa ttcgtcaaaa
     1321 aggtagataa acccaggcac gtgacaattt tgtgggcaat gggcctcatt aaaaaccatt
     1381 tgggacggta tcataaaaaa gatacgagca tttaagtatg tcgactcaga attcggcact
     1441 taagatagtt ttagtcttag aaattccgag aatatactta gcatttaaat atttttttca
     1501 ataaatcaag aagtaattca ctttt