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LOCUS XM_070218266 4769 bp mRNA linear INV 09-DEC-2024 variant X7, mRNA. ACCESSION XM_070218266 VERSION XM_070218266.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4769 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4769 /gene="Cht6" /note="Chitinase 6; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108068041" CDS 216..4373 /gene="Cht6" /codon_start=1 /product="oviduct-specific glycoprotein isoform X3" /protein_id="XP_070074367.1" /db_xref="GeneID:108068041" /translation="MLPFRRGAAWQTLFLLCALAYCINEASSEGRVVCYYTNWSVYRP GTAKFNPQNINPYLCTHLVYAFGGFTKDNQMKPFDKYQDIEQGGYAKFTGLKTYNKQL KTMIAIGGWNEASSRFSPLVASNERRQQFIKNILKFLRQNHFDGIDLDWEYPAHREGG KSRDRDNYAQFVQELRAEFEREAEKTGRTRLLLTMAVPAGIEYIDKGYDVPKLNKYLD WFNVLTYDFHSSHEPSVNHHAPLYSLEEDSEYNYDAELNIDYSIKYYLKAGADRDKLV LGIPTYGRSYTLINEESTELGAPSEGPGEQGDATREKGYLAYYEICQTLKDDPEWTVV QPNANVMGPYAYRRNQWVGYDDEAIVRKKAEYVVAQGLGGIMFWAIDNDDFRGTCNGK PYPLIEAAKEAMVEALGLGINEVAKPSGPQKPSRSRSRDNASTRNRLNGKTEATPSSR RPSATRRPAISSTSTTHAPPPSTTFKLTEAEGSSLYIGGRASTTPPPPTTPDPGSDFK CEEEGFFQHPRDCKKYYWCLDSGPSGLGIVAHMFTCPSGLYFNPAADSCDFARNVPCK TKKSTTAAPAVSSTTPLTTTVRSNRVTAAPTARPVYPRTTSSTSTTSTTTTTTTTTPS SVDEDLEYEEDTDELSPSKSSDAEEDPQVIKELIDLIRKVGGVEQLEKHLLRNKDGSI TLKENSASGAATTPSTISKSLYDRVLSRPGTLSSFTRNRFKISEATETSTEASSSLSS SSSGSSSGSSSGQYSKYSSVLRGNSRQGPQNEGIEKLAEFDGFLKERKQYVTINRHRS ASQGDEEQEEDQQEEEENLAEVQTTTTRRPLSSVTPSYTSLRRTRPTTVAPPAEQQPQ QQEEKEAVEQQTQTQVKSYATLSRTRGRTTAPPEVTEAAPSSTTNRYKYFERTRPTKS ASATEDANDEPTEDQEEEEYEDEQKDIVTLRQPTTGSVSRRPVLSVRRRIINSPTSAA VEATTTQQPAEPPTTSKYNRLRSRPSAAAATTTAAAATTTFPAATSVAGGRTSSNIYL NKLKAKSGAAAAASGEAATLTPATSNISSSSSNIASNDITQKQQQHKFQPASFALRRQ FQTRRLTTFAPAANGDESATDVPRTQNPLFKRRLTLISTTPPSARTTNPPNSALETTT TLYLNDDDEDQVAKSSIHTSRFNQIPEQVRPREEFELPLPAQPLKSPSSTASTTANAP LPVISQGIRRQLIPRPRRPQSTTATPLTTPTLGSSQGSTTPAGHSAPPLSRRQQSRRR PHKYIEVYSRPPAKSAVLTATASSQLAAEDGGYQVAQRRRSGSIAPAKSGQDTKVIVH GRGIIECRAQGNFPHPLNCRKFISCARFEETGGIVGWEYTCPKGLTYDGVGGMCTWSP SDQPCRD" misc_feature 309..1427 /gene="Cht6" /note="This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active...; Region: GH18_chitolectin_chitotriosidase; cd02872" /db_xref="CDD:119351" misc_feature order(318..320,330..332,546..551,663..665,669..674, 810..815,882..884,888..893,906..908,1059..1061,1065..1067, 1149..1151,1347..1349) /gene="Cht6" /note="active site" /db_xref="CDD:119351" misc_feature 1740..1910 /gene="Cht6" /note="Chitin binding Peritrophin-A domain; Region: CBM_14; pfam01607" /db_xref="CDD:426342" misc_feature 4197..4364 /gene="Cht6" /note="Chitin binding Peritrophin-A domain; Region: CBM_14; pfam01607" /db_xref="CDD:426342" ORIGIN 1 agtgcagcgg cgactctcga acgcattatt ttttcctcct cgtcgttgtc gtcgcgttta 61 actgaaataa taacaacaac aacaacgaga gcagcagcaa catcagcagc agcaacagca 121 acagcaacag cgacagcagc aacaccattg ccagcagcaa catctagccc aaaggagcct 181 tgtattgcca cctcgaccag caaaaagccg ccaaaatgct tccgttccgg cgtggagcgg 241 cctggcaaac gctcttcctg ctctgcgctc tcgcctattg cataaatgaa gccagcagcg 301 agggtcgcgt ggtctgctac tacacaaact ggagtgtcta tcggccgggc accgccaagt 361 tcaatccgca gaacatcaat ccatacctgt gtacacattt ggtgtacgca ttcggtggat 421 tcacgaagga caaccagatg aagccctttg acaagtacca ggacatcgag cagggtggct 481 atgccaagtt cactggactc aaaacgtaca acaaacagct gaagaccatg attgccatcg 541 gcggttggaa cgaggcgagt tccagatttt cgcccctggt ggcgagcaac gagcgccgcc 601 agcagttcat caagaacatc ctgaagttcc tgcgccagaa ccacttcgat ggcatcgatc 661 tcgactggga gtatccggct catcgcgagg gcggcaagtc ccgcgatcgc gacaactatg 721 cccagtttgt ccaggagctg cgggccgagt tcgaaaggga ggcggagaaa acgggacgca 781 cccgactcct gctcaccatg gccgtgcccg ccggcatcga gtacatcgac aagggctacg 841 atgtgcccaa gctgaacaag tatctggatt ggttcaatgt gctcacctac gacttccact 901 cctcccacga gccgtcggtc aaccaccacg ctccgctcta ttcgctggag gaggattccg 961 agtacaacta cgatgccgag ctgaatattg actactccat taaatactac ctgaaagcgg 1021 gtgccgatcg ggacaagctg gtcctgggca ttcccaccta tggacgatcc tacactttga 1081 tcaacgagga gagcaccgaa ctgggggcac cttccgaggg tccgggagag cagggtgatg 1141 ccacgcgcga aaagggatac ctggcctact atgaaatctg tcagaccctc aaggacgatc 1201 ccgagtggac ggtggtgcag ccgaatgcca atgtgatggg tccctacgcc tacaggcgca 1261 accagtgggt gggctacgat gacgaggcca ttgtgcgcaa gaaggccgag tatgtggtgg 1321 cccagggact gggcggcatt atgttctggg ccatcgacaa cgacgatttc cgcggcacct 1381 gcaacggcaa gccctatccg ctcatcgagg cggccaagga ggccatggtg gaggcactgg 1441 gactgggcat caacgaggtg gccaagccaa gtggtcccca gaaaccgtcg cgatctcgca 1501 gtcgcgacaa tgccagcacc aggaatcgtc tgaatggcaa gaccgaagcc acgcccagtt 1561 caaggaggcc cagtgccacc agaaggccag ccataagctc caccagcacc acccacgcac 1621 cgccaccgag caccaccttc aagctaacgg aggccgaggg ctcttcgctg tatattggag 1681 gcagggcctc caccacaccg ccaccgccca cgactcccga tccgggctcg gacttcaagt 1741 gcgaggagga gggcttcttc cagcatccca gggactgcaa gaaatactac tggtgcctgg 1801 acagtggacc ctctggcctg ggcattgtgg ctcacatgtt cacctgtccg tcgggactct 1861 acttcaatcc ggccgccgat tcctgcgact ttgcacgcaa tgtgccctgc aagaccaaaa 1921 aatccaccac agcggcaccg gcagtgagct ccaccacacc gctgaccacc acagtgcgtt 1981 cgaatcgggt gactgcggcg cccacagctc gtcccgttta tccacgaacc accagcagca 2041 ctagcaccac cagcactaca accaccacca caacaaccac cccgtcgtct gttgatgaag 2101 atttggagta cgaggaggac accgatgagc tgtcgcccag caagtcgagc gatgccgagg 2161 aggatccgca ggtgatcaag gagctgatcg atctgattcg caaggtgggc ggtgtggagc 2221 agctggagaa gcatctgctg cgcaacaagg atggctccat tacgttgaag gagaattccg 2281 cgagtggtgc ggccaccaca ccttctacta ttagtaaatc tctgtacgat cgtgtgttga 2341 gtcgacctgg cactttgagt tccttcaccc gcaatcgctt caagatcagc gaagccaccg 2401 agacgagcac ggaggccagc tcttctttga gtagctcttc gagtggctca tcgagtggct 2461 catcgagtgg ccaatactcc aaatactcct ccgtcctgag gggcaacagc cgccagggtc 2521 cacagaacga gggcattgaa aagttggccg agttcgatgg cttcctgaag gagcgcaagc 2581 aatatgtgac catcaatcgc catcgatcgg cgagtcaggg cgatgaggag caggaggagg 2641 atcagcagga ggaggaggag aacctggccg aggttcaaac aacaaccacc cgtcgtccgc 2701 tgagctcagt caccccctct tacacgagtc tcagacgcac caggcccacc acagtggcac 2761 cgccggcaga acaacaacca cagcagcagg aggagaagga ggcggtggag caacagaccc 2821 agactcaggt caaatcctat gccaccttga gtcgcacgcg tggacgcacc actgcaccac 2881 cagaggtcac ggaagcggcg cccagttcga caaccaatcg ttacaaatac tttgagcgta 2941 cgcgacccac caagagtgcc agtgccactg aggatgccaa cgatgagccg acggaggacc 3001 aggaagagga ggagtacgag gacgagcaaa aggacattgt tacgctgcgt caaccgacga 3061 ctggcagcgt ttcgcggcga ccggtgttga gtgtccgccg gcggattatc aactcaccga 3121 cgtcggcggc ggttgaggcc accaccacgc agcagccagc agaaccgcca acgacctcca 3181 aatacaaccg actgcgcagc agaccctcgg cagcagcagc aactacgaca gcagcagcag 3241 caaccacaac cttcccagca gcaacatctg ttgctggcgg cagaaccagc agcaacatct 3301 acctgaacaa gctgaaagct aagagcggag cagctgcggc agcatccggc gaggcagcaa 3361 cactgacgcc agcaactagc aacatcagca gcagcagcag caacatcgcc agcaatgaca 3421 tcacacaaaa gcaacagcaa cacaagttcc agcccgccag cttcgcgctg cgccgccaat 3481 ttcaaacgcg tcgactgaca accttcgcac cggcggccaa cggcgatgag agtgccaccg 3541 atgtgccgcg aacgcagaac ccgctcttca agcgtcgcct caccctgata tccaccacac 3601 cgccatccgc tcgcaccacc aacccaccaa actcggccct ggaaaccacc accacgctgt 3661 atctgaacga cgacgacgag gatcaggtgg ccaagtcgag cattcacacc agccgcttca 3721 accagatccc ggagcaagtg cgtccgcgcg aggaattcga actgccattg ccggcgcagc 3781 cactgaagag ccccagctcc acggccagca ccaccgccaa tgcaccactg ccagtgatta 3841 gccagggaat aagacgccag ttgataccgc gcccccgtcg accgcagtcg accacggcca 3901 cgcccctgac cacgcccacg ctgggctcat cccaggggtc gaccacgccg gccggacact 3961 cggctccacc gctctcccgt cgccagcaga gtcgtcgtcg tccgcacaag tacatcgagg 4021 tctacagccg cccgccggcc aaaagtgccg tgctcacggc caccgcgagc agtcagctgg 4081 cggcggagga cgggggctac caggtggccc agaggcggcg cagcggaagc atcgcaccgg 4141 ccaagagtgg ccaggacacc aaggtcattg tccacgggcg gggaatcatc gagtgccggg 4201 cgcagggcaa ctttccgcac ccgctgaact gcaggaagtt catatcgtgc gccaggttcg 4261 aggagaccgg cggcatcgtc ggctgggagt acacctgtcc caagggactc acctacgacg 4321 gcgtcggcgg gatgtgcacc tggtcgccct cggatcagcc ctgccgggac tagactgata 4381 taaaaaaaat aacaaaaaaa ccactgcccc taaataagcc tagaaaagcc ctaaaaaacc 4441 cttaatcatt tacccaaatc atatacccta aatcatattc gattgaaaaa gaggaaaatc 4501 aaattttaaa cccatttgta catgtttttt cccaatttgt gatttgttct gaagcagccg 4561 agattgaaaa cgagagaagc gagaggagaa ggaagaaagt ggaaattcta cgttaattat 4621 tcttatttaa gcttagtgat atctcaaccc aatttttttt gcgcctgcca actcagtagt 4681 aagcaagaaa tattgtctgt agttcaccat cccatatata tatagcgcca tatatatgtg 4741 gttgtgcgtg tgtacgctat ataccataa