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LOCUS XM_070218264 8496 bp mRNA linear INV 09-DEC-2024 variant X5, mRNA. ACCESSION XM_070218264 VERSION XM_070218264.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8496 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8496 /gene="Cht6" /note="Chitinase 6; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108068041" CDS 137..7831 /gene="Cht6" /codon_start=1 /product="mucin-2 isoform X1" /protein_id="XP_070074365.1" /db_xref="GeneID:108068041" /translation="MLPFRRGAAWQTLFLLCALAYCINEASSEGRVVCYYTNWSVYRP GTAKFNPQNINPYLCTHLVYAFGGFTKDNQMKPFDKYQDIEQGGYAKFTGLKTYNKQL KTMIAIGGWNEASSRFSPLVASNERRQQFIKNILKFLRQNHFDGIDLDWEYPAHREGG KSRDRDNYAQFVQELRAEFEREAEKTGRTRLLLTMAVPAGIEYIDKGYDVPKLNKYLD WFNVLTYDFHSSHEPSVNHHAPLYSLEEDSEYNYDAELNIDYSIKYYLKAGADRDKLV LGIPTYGRSYTLINEESTELGAPSEGPGEQGDATREKGYLAYYEICQTLKDDPEWTVV QPNANVMGPYAYRRNQWVGYDDEAIVRKKAEYVVAQGLGGIMFWAIDNDDFRGTCNGK PYPLIEAAKEAMVEALGLGINEVAKPSGPQKPSRSRSRDNASTRNRLNGKTEATPSSR RPSATRRPAISSTSTTHAPPPSTTFKLTEAEGSSLYIGGRASTTPPPPTTPDPGSDFK CEEEGFFQHPRDCKKYYWCLDSGPSGLGIVAHMFTCPSGLYFNPAADSCDFARNVPCK TKKSTTAAPAVSSTTPLTTTVRSNRVTAAPTARPVYPRTTSSTSTTSTTTTTTTTTPS SVDEDLEYEEDTDELSPSKSSDAEEDPQVIKELIDLIRKVGGVEQLEKHLLRNKDGSI TLKENSASGAATTPSTISKSLYDRVLSRPGTLSSFTRNRFKISEATETSTEASSSLSS SSSGSSSGSSSGQYSKYSSVLRGNSRQGPQNEGIEKLAEFDGFLKERKQYVTINRHRS ASQGDEEQEEDQQEEEENLAEVQTTTTRRPLSSVTPSYTSLRRTRPTTVAPPAEQQPQ QQEEKEAVEQQTQTQVKSYATLSRTRGRTTAPPEVTEAAPSSTTNRYKYFERTRPTKS ASATEDANDEPTEDQEEEEYEDEQKDIVTVQSKQSTNTRKYASIGRRTTTTTTATPET TTTTTAGTETAKASTTTTTNKNNNHYNSSNNNYNNVKLNNLIPTEENNTATPSTTAQS ETTTTTTTNETTEPNESTSTTTITNNLHTITTTTTTPTPTPIVASTVPTTTTTTSNGI SSDSLLATELSEASPTLPPSNPDIETTTPTTTTSTTTTESELATTTTPRTTTTTGNIE LNDVNNNDVDEDSEVTKTKTQYKYATTNRRRITTTTTTTTNNNAEAANDASPTNGLSS LNSIRTNPGRRKPQSEQQTTQTTTTEPTISSPRPFGYPRRRTRPTSTVSTSTTTIPQT DNTDNNNNTDNNDNETGAVAQVVKKTRLSPGDRPKNRYQLSRTRGSTTNTTPTTQQPP TTTTTARRLAFGGRQRGQVTKLTLVDEQTEEHKEEDDDGEEEEKEAEEDSSTTTTTTT TSRPTPKRIRVLKFRRPLNSNSNSTTVDSTTNSATDTNNPDTTTPTTTTLSQSSNTTT TTNTTGNKRFRKIVRKLRPVVDSSSTASSVDNSEETTRKPFVPSHTRFTDLQDNNNDL VNLRQRIKEQQSRGEPQDGVISNRFKTLGQKDDQDVSDLQRLRDKVKAEQARGEGEQG VINDRLKKLLAEKGTSTNSRQREESSATEDESSASVSSARPFFKRKLVARRPYTPTSG SGGTTKAPLAFSTTRPTAKFVRKKNGRFDPFNSSVRNRGEGFVRSDPRGSRLPGADRF KSQSEDGEEVEERHVQNQFATTLRRPFVPKTRSEVTKPQQVGDEEGSEEEDDEEEEED SEEEGGDEEEDEEEDEAAEKNQPEEEEKKSQNNPYKPKDNRVLPGSRPTFGATGSGPT GSAGNVPFNPRQRPSSSSSIAPPANRFGTTKRPRVVNRPPGVASPNLTLKPVASDYER TTPLTLLKPAPFIPSNNRSYERKYTGPSTEASETASENSLIEELNIDALNARNKKIFD KHSKKHPALKPKVVKVEEVETGTEAVAVEEETTEEQQQEQGFVTTTPSTPLAPPPPST QSDTPATTTTDTTPPETETETETETEIETVTETETATNANEATSINSQDQSSSSNSSS TTQAPPPATTLLHVFTLLEGEGESENEGETTTTTRRPTQKARLHPTVQTEVVPKHKLI EINRIVEINSKQAKAAQRKSKANQDFGTLRVESLPHVEQLGEISVVKYVHLVDGSDIQ INDGHSTVADYTPTEPNFSASSAPVRNSLPETETTDTETDRSGKSLVPEVLTGALETS TISLEGLFDSARKGKQLSSNSIISETEESTTISSSSAAATETTGETTTPAPTYVRPIV PLLRPESNESSPLVISIANLDQVILSKVQKSLAEKSRTPADSSDSNSAFSLRQPLVVQ APEAANTNTLNTEDQTVNGAVQTTTTRPSDDQVAEETTIFSIETATEPQISTQITQDS ETLTARPIGAVIMGQLGLNTQTTTTADNGNQENTQTTSTISSADNNNNNSHQENTQTT ISGAISSEAISNKNNNHLTLDTQTTVTKNSPENTQTTTTTTTIGAISGAIGGSINPST QVTTTTNSNSTTTSSSSTTTTVGSKVSEAVSFSSESHVVHRKKMGRKGRGRRLRNRKT TTTTTTTETPTTVEASLDDTTTVVPE" misc_feature 230..1348 /gene="Cht6" /note="This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active...; Region: GH18_chitolectin_chitotriosidase; cd02872" /db_xref="CDD:119351" misc_feature order(239..241,251..253,467..472,584..586,590..595, 731..736,803..805,809..814,827..829,980..982,986..988, 1070..1072,1268..1270) /gene="Cht6" /note="active site" /db_xref="CDD:119351" misc_feature 1661..1831 /gene="Cht6" /note="Chitin binding Peritrophin-A domain; Region: CBM_14; pfam01607" /db_xref="CDD:426342" misc_feature 6950..>7576 /gene="Cht6" /note="MSCRAMM family adhesin clumping factor ClfA; Region: MSCRAMM_ClfA; NF033609" /db_xref="CDD:468110" polyA_site 8496 /gene="Cht6" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttgttggcct tagcgcagca acatcagcag cagcaacagc aacagcaaca gcgacagcag 61 caacaccatt gccagcagca acatctagcc caaaggagcc ttgtattgcc acctcgacca 121 gcaaaaagcc gccaaaatgc ttccgttccg gcgtggagcg gcctggcaaa cgctcttcct 181 gctctgcgct ctcgcctatt gcataaatga agccagcagc gagggtcgcg tggtctgcta 241 ctacacaaac tggagtgtct atcggccggg caccgccaag ttcaatccgc agaacatcaa 301 tccatacctg tgtacacatt tggtgtacgc attcggtgga ttcacgaagg acaaccagat 361 gaagcccttt gacaagtacc aggacatcga gcagggtggc tatgccaagt tcactggact 421 caaaacgtac aacaaacagc tgaagaccat gattgccatc ggcggttgga acgaggcgag 481 ttccagattt tcgcccctgg tggcgagcaa cgagcgccgc cagcagttca tcaagaacat 541 cctgaagttc ctgcgccaga accacttcga tggcatcgat ctcgactggg agtatccggc 601 tcatcgcgag ggcggcaagt cccgcgatcg cgacaactat gcccagtttg tccaggagct 661 gcgggccgag ttcgaaaggg aggcggagaa aacgggacgc acccgactcc tgctcaccat 721 ggccgtgccc gccggcatcg agtacatcga caagggctac gatgtgccca agctgaacaa 781 gtatctggat tggttcaatg tgctcaccta cgacttccac tcctcccacg agccgtcggt 841 caaccaccac gctccgctct attcgctgga ggaggattcc gagtacaact acgatgccga 901 gctgaatatt gactactcca ttaaatacta cctgaaagcg ggtgccgatc gggacaagct 961 ggtcctgggc attcccacct atggacgatc ctacactttg atcaacgagg agagcaccga 1021 actgggggca ccttccgagg gtccgggaga gcagggtgat gccacgcgcg aaaagggata 1081 cctggcctac tatgaaatct gtcagaccct caaggacgat cccgagtgga cggtggtgca 1141 gccgaatgcc aatgtgatgg gtccctacgc ctacaggcgc aaccagtggg tgggctacga 1201 tgacgaggcc attgtgcgca agaaggccga gtatgtggtg gcccagggac tgggcggcat 1261 tatgttctgg gccatcgaca acgacgattt ccgcggcacc tgcaacggca agccctatcc 1321 gctcatcgag gcggccaagg aggccatggt ggaggcactg ggactgggca tcaacgaggt 1381 ggccaagcca agtggtcccc agaaaccgtc gcgatctcgc agtcgcgaca atgccagcac 1441 caggaatcgt ctgaatggca agaccgaagc cacgcccagt tcaaggaggc ccagtgccac 1501 cagaaggcca gccataagct ccaccagcac cacccacgca ccgccaccga gcaccacctt 1561 caagctaacg gaggccgagg gctcttcgct gtatattgga ggcagggcct ccaccacacc 1621 gccaccgccc acgactcccg atccgggctc ggacttcaag tgcgaggagg agggcttctt 1681 ccagcatccc agggactgca agaaatacta ctggtgcctg gacagtggac cctctggcct 1741 gggcattgtg gctcacatgt tcacctgtcc gtcgggactc tacttcaatc cggccgccga 1801 ttcctgcgac tttgcacgca atgtgccctg caagaccaaa aaatccacca cagcggcacc 1861 ggcagtgagc tccaccacac cgctgaccac cacagtgcgt tcgaatcggg tgactgcggc 1921 gcccacagct cgtcccgttt atccacgaac caccagcagc actagcacca ccagcactac 1981 aaccaccacc acaacaacca ccccgtcgtc tgttgatgaa gatttggagt acgaggagga 2041 caccgatgag ctgtcgccca gcaagtcgag cgatgccgag gaggatccgc aggtgatcaa 2101 ggagctgatc gatctgattc gcaaggtggg cggtgtggag cagctggaga agcatctgct 2161 gcgcaacaag gatggctcca ttacgttgaa ggagaattcc gcgagtggtg cggccaccac 2221 accttctact attagtaaat ctctgtacga tcgtgtgttg agtcgacctg gcactttgag 2281 ttccttcacc cgcaatcgct tcaagatcag cgaagccacc gagacgagca cggaggccag 2341 ctcttctttg agtagctctt cgagtggctc atcgagtggc tcatcgagtg gccaatactc 2401 caaatactcc tccgtcctga ggggcaacag ccgccagggt ccacagaacg agggcattga 2461 aaagttggcc gagttcgatg gcttcctgaa ggagcgcaag caatatgtga ccatcaatcg 2521 ccatcgatcg gcgagtcagg gcgatgagga gcaggaggag gatcagcagg aggaggagga 2581 gaacctggcc gaggttcaaa caacaaccac ccgtcgtccg ctgagctcag tcaccccctc 2641 ttacacgagt ctcagacgca ccaggcccac cacagtggca ccgccggcag aacaacaacc 2701 acagcagcag gaggagaagg aggcggtgga gcaacagacc cagactcagg tcaaatccta 2761 tgccaccttg agtcgcacgc gtggacgcac cactgcacca ccagaggtca cggaagcggc 2821 gcccagttcg acaaccaatc gttacaaata ctttgagcgt acgcgaccca ccaagagtgc 2881 cagtgccact gaggatgcca acgatgagcc gacggaggac caggaagagg aggagtacga 2941 ggacgagcaa aaggacattg ttacggtaca gagcaaacaa agcacaaaca cacgtaaata 3001 tgcgagcatc ggccgcagaa caacaaccac cacaacagca acaccagaaa ctacaacaac 3061 aacaaccgcc ggcactgaga ctgccaaggc cagcaccacc accaccacca acaagaacaa 3121 caaccactac aacagcagca ataacaacta caacaatgtg aaactgaata acctaatacc 3181 aacagaagag aacaacacag caacacccag caccaccgcc caatccgaaa ccaccaccac 3241 cactacaact aacgaaacca ctgaaccaaa tgaaagcacc tcaaccacaa ccataactaa 3301 taacctgcat accatcacca ccaccaccac cacacccaca cccacaccaa ttgtagcctc 3361 cactgtccca acaacaacaa caaccacctc caatggcatt agctcagact ctctgctagc 3421 caccgagctg agcgaagcct cgcccaccct ccctccttcc aatcccgaca tagaaacaac 3481 cacaccgaca acaaccacct caaccacaac aacggaatcc gaactggcca ctacaaccac 3541 accgagaaca acaaccacaa caggcaacat cgaactgaat gacgtgaaca acaacgacgt 3601 ggacgaggac agcgaggtaa cgaaaaccaa gacccaatac aagtatgcga ccaccaaccg 3661 tcgacgtata accacaacaa caacaaccac caccaacaac aatgcagaag cagcgaacga 3721 tgctagtcca acaaacggtt tgagtagttt aaatagcatt agaaccaacc cgggcagaag 3781 gaaaccccaa tcagaacaac agaccaccca aacaacaacc accgaaccaa ccatttctag 3841 tccccgaccc tttggttatc cccgacgtcg cacacgaccc accagcacag tcagcactag 3901 cacaaccaca attccccaaa ccgataatac cgataataat aacaataccg ataataacga 3961 taacgaaacc ggagcagttg cgcaagtagt gaagaagaca cgactatctc caggggatag 4021 gcccaagaat cgttatcaat tgagccgcac cagaggcagc accaccaaca ccaccccaac 4081 aacacaacaa cccccaacaa caaccaccac agccagaaga ctggcctttg ggggccgtca 4141 gcgtggccag gtaactaaac taaccctagt cgatgagcag actgaagaac acaaagagga 4201 agatgatgat ggagaagaag aggagaagga ggcggaagaa gactccagca caacaacaac 4261 caccacaacc accagcagac caacaccaaa gcgcatacgt gtgctgaaat tccgcagacc 4321 cttgaatagc aatagcaata gtaccactgt agatagcacc actaatagcg ccactgacac 4381 taataaccca gacaccacca caccaacaac aaccacattg agccaaagca gcaacaccac 4441 caccaccaca aacaccactg gcaacaagcg tttccgcaaa attgtccgca aactgaggcc 4501 tgtggtggac tcttcgagta ccgcgtctag tgtggacaat tccgaggaaa ccacccgtaa 4561 acctttcgtt cccagccaca ccagattcac ggatttgcag gacaacaaca acgatctggt 4621 gaatcttcgc cagcggatca aggagcagca atcacggggc gagccgcagg atggtgtgat 4681 cagcaatcga ttcaagaccc tcggtcaaaa ggacgatcag gatgtttcgg atttgcagag 4741 gttgcgcgac aaggtgaagg ccgaacaggc gagaggagag ggtgagcagg gtgtgatcaa 4801 cgatcgcctg aagaagttgc tggccgaaaa gggcacaagt acgaattctc gccagagaga 4861 agaatcctcg gccacagaag acgagtcttc cgcgtcggtt tcctcggcca gacccttctt 4921 caaacgcaaa ctggtggccc gtcgacccta tacaccaacc tcgggcagtg gtggcaccac 4981 caaggcacca ctcgccttca gcaccacccg acccaccgcg aagtttgtgc gcaagaagaa 5041 cggccgcttc gatcccttca actcgagtgt tcgcaatcgc ggcgagggct tcgtgagaag 5101 cgatccccgt ggctccagat tgccgggagc cgatcgcttc aagagtcagt cggaagacgg 5161 tgaggaggtg gaagaaaggc atgtgcagaa tcagtttgcc accaccttgc gacgaccttt 5221 tgtgccgaag acgcgatcgg aggtgactaa accacagcag gttggagatg aagagggcag 5281 tgaggaagaa gacgacgagg aagaggagga ggattccgag gaagagggcg gcgacgaaga 5341 ggaggatgag gaagaagatg aggcggctga gaagaatcag ccggaagagg aggagaaaaa 5401 gtcccagaac aacccgtaca agcccaagga taaccgcgtg ctgccgggca gtcgacccac 5461 ctttggagcc accggaagtg gacccactgg ctccgcaggc aacgtgccct tcaatccccg 5521 ccagcgtcca tcatcttcaa gcagcattgc accaccggcc aaccgctttg gcaccaccaa 5581 gcgaccacgc gtcgtcaacc gaccacccgg agtggcctca cctaacttga ccttgaaacc 5641 ggtggccagt gattacgagc gcaccacacc gctgaccctt ttgaagccgg caccctttat 5701 acccagcaat aataggagct acgagcgaaa atacacgggt ccctccacag aggcctctga 5761 gacggccagc gagaattcgc tgatcgaaga gctgaatatc gatgcgctga atgcgaggaa 5821 caagaagatc ttcgacaagc acagcaagaa gcatccggca ctgaagccca aggtggtgaa 5881 ggttgaggag gtggaaaccg gaacggaggc ggtggcggtg gaggaggaaa ccaccgagga 5941 gcagcagcag gaacagggct ttgtgaccac cacacccagt acaccactag caccaccacc 6001 acccagcaca cagtcagaca caccagccac caccaccaca gacaccacgc caccagaaac 6061 agaaactgaa actgaaacag aaactgaaat agaaactgta accgaaactg aaacagcgac 6121 caatgctaat gaagccactt ccatcaattc acaggatcaa tcgagcagca gcaacagcag 6181 cagcaccact caggcaccac cgcctgccac caccctgctg catgtgttca ccctgctcga 6241 gggtgagggt gagtccgaga atgagggtga aaccaccacc acgacgagaa ggccgacgca 6301 gaaggcccgt cttcatccca ctgtgcaaac ggaggtggtg cccaagcaca agttgatcga 6361 gatcaatcgc attgtcgaga tcaattcgaa gcaggccaag gctgctcagc ggaaatcgaa 6421 ggctaatcag gactttggaa cgctgcgcgt ggaatcgctg ccccatgtgg agcagctggg 6481 cgagatcagt gtggtgaagt acgtccatct ggtggatgga agtgatattc aaatcaatga 6541 tggccacagc acagtggctg attatacgcc cacggagccc aacttctcag cttcgtcggc 6601 acctgtgagg aattccctgc cagaaacgga aacaaccgat accgaaaccg atcgtagtgg 6661 caaatccttg gttccagaag tgctgaccgg cgccctggag acctcgacca tctcgctgga 6721 gggactattc gattccgcca ggaagggcaa gcaactgagc agcaatagca ttatcagtga 6781 aacagaagag agcaccacca ttagcagcag cagtgctgcg gccaccgaaa ccaccgggga 6841 gacaaccaca ccggcaccca cttacgtaag acccattgta cccctcctac gacccgagtc 6901 caatgagtcc tcgcccctgg tcatttcgat agccaatctc gatcaggtga ttctgagcaa 6961 ggtgcaaaag tcgctggccg agaagagccg aacccctgcc gattcttctg actcaaattc 7021 ggccttctcg ctgcgccagc cgctggtggt gcaggctcca gaagccgcaa acacgaacac 7081 actcaacact gaagatcaaa cggtcaatgg tgctgtgcaa acaacaacca ctaggccatc 7141 agacgatcag gtggctgaag agaccacaat ctttagcatt gagaccgcca ctgagccaca 7201 gattagtaca caaataacac aagacagtga aacactaaca gccaggccaa ttggtgctgt 7261 gattatgggt cagcttggtc taaacacaca aacaacaacc accgctgaca acggcaatca 7321 ggaaaatact caaacaacga gcacaattag cagtgctgac aacaacaaca acaacagcca 7381 ccaagaaaat actcaaacaa caatcagtgg cgctattagt tccgaagcta ttagtaacaa 7441 gaacaacaac cacctgacac tcgatacaca aacaacagtc accaaaaaca gtccagaaaa 7501 tacgcaaaca acaacaacca caaccacaat tggcgcaatt agtggggcta ttggtggcag 7561 cataaatccg agcacacaag taacaacaac caccaatagc aatagcacca ccactagcag 7621 cagcagcacc acaaccacag tgggcagcaa agttagcgag gcagttagct ttagttcgga 7681 gtcgcatgtg gtgcatcgca aaaagatggg gcgcaagggg cgtggccgac gcctgcgcaa 7741 ccgcaaaaca acgacaacaa caacaaccac agagacgccg accacggtgg aggcgtcgct 7801 tgacgacacc accacggtgg ttccggaata ggtcacaaaa agaaccacaa aacaaccaga 7861 gaaaatcagc gtagttagtt atttctagtc ttagccctta tcttatccac agaagagagt 7921 cttctgcgaa attaaccctt ttgttgccaa aaccttagat aattggctgc gttgctttgg 7981 cttaacaaca acaaccatgg caagaaaatc aaaaatcaaa ttaagtaaac aaccatttcg 8041 gctgctttta aactctttcc aaatttccca gtgctgctgc ttttaatttg aatactctac 8101 tatatatatc tatttttttt tttgctatgt aaattattta aacaattcgt attcttcgag 8161 ctgccatacc taaacaacaa caacacccac acaacatata catccactca cacacattcg 8221 ttcacacatg cagatgcgaa aagtctttcc ttggttcaaa tatagaatag aaatctagaa 8281 atctagacaa acaacgaccc tcagtggatg caaaatcttg atcaacttga agtaactctt 8341 aatggctttt accaggcgca gttctctctc acaattctat ctctttgcta atcaattttt 8401 ttcactcttt ccccctctat ccgaaatact ttaagtctag ctttagttgt aaaatattta 8461 tgcacaacaa taaaataatg aacaaaaaga aacaaa