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LOCUS XM_070218263 8499 bp mRNA linear INV 09-DEC-2024 variant X4, mRNA. ACCESSION XM_070218263 VERSION XM_070218263.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8499 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8499 /gene="Cht6" /note="Chitinase 6; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108068041" CDS 140..7834 /gene="Cht6" /codon_start=1 /product="mucin-2 isoform X1" /protein_id="XP_070074364.1" /db_xref="GeneID:108068041" /translation="MLPFRRGAAWQTLFLLCALAYCINEASSEGRVVCYYTNWSVYRP GTAKFNPQNINPYLCTHLVYAFGGFTKDNQMKPFDKYQDIEQGGYAKFTGLKTYNKQL KTMIAIGGWNEASSRFSPLVASNERRQQFIKNILKFLRQNHFDGIDLDWEYPAHREGG KSRDRDNYAQFVQELRAEFEREAEKTGRTRLLLTMAVPAGIEYIDKGYDVPKLNKYLD WFNVLTYDFHSSHEPSVNHHAPLYSLEEDSEYNYDAELNIDYSIKYYLKAGADRDKLV LGIPTYGRSYTLINEESTELGAPSEGPGEQGDATREKGYLAYYEICQTLKDDPEWTVV QPNANVMGPYAYRRNQWVGYDDEAIVRKKAEYVVAQGLGGIMFWAIDNDDFRGTCNGK PYPLIEAAKEAMVEALGLGINEVAKPSGPQKPSRSRSRDNASTRNRLNGKTEATPSSR RPSATRRPAISSTSTTHAPPPSTTFKLTEAEGSSLYIGGRASTTPPPPTTPDPGSDFK CEEEGFFQHPRDCKKYYWCLDSGPSGLGIVAHMFTCPSGLYFNPAADSCDFARNVPCK TKKSTTAAPAVSSTTPLTTTVRSNRVTAAPTARPVYPRTTSSTSTTSTTTTTTTTTPS SVDEDLEYEEDTDELSPSKSSDAEEDPQVIKELIDLIRKVGGVEQLEKHLLRNKDGSI TLKENSASGAATTPSTISKSLYDRVLSRPGTLSSFTRNRFKISEATETSTEASSSLSS SSSGSSSGSSSGQYSKYSSVLRGNSRQGPQNEGIEKLAEFDGFLKERKQYVTINRHRS ASQGDEEQEEDQQEEEENLAEVQTTTTRRPLSSVTPSYTSLRRTRPTTVAPPAEQQPQ QQEEKEAVEQQTQTQVKSYATLSRTRGRTTAPPEVTEAAPSSTTNRYKYFERTRPTKS ASATEDANDEPTEDQEEEEYEDEQKDIVTVQSKQSTNTRKYASIGRRTTTTTTATPET TTTTTAGTETAKASTTTTTNKNNNHYNSSNNNYNNVKLNNLIPTEENNTATPSTTAQS ETTTTTTTNETTEPNESTSTTTITNNLHTITTTTTTPTPTPIVASTVPTTTTTTSNGI SSDSLLATELSEASPTLPPSNPDIETTTPTTTTSTTTTESELATTTTPRTTTTTGNIE LNDVNNNDVDEDSEVTKTKTQYKYATTNRRRITTTTTTTTNNNAEAANDASPTNGLSS LNSIRTNPGRRKPQSEQQTTQTTTTEPTISSPRPFGYPRRRTRPTSTVSTSTTTIPQT DNTDNNNNTDNNDNETGAVAQVVKKTRLSPGDRPKNRYQLSRTRGSTTNTTPTTQQPP TTTTTARRLAFGGRQRGQVTKLTLVDEQTEEHKEEDDDGEEEEKEAEEDSSTTTTTTT TSRPTPKRIRVLKFRRPLNSNSNSTTVDSTTNSATDTNNPDTTTPTTTTLSQSSNTTT TTNTTGNKRFRKIVRKLRPVVDSSSTASSVDNSEETTRKPFVPSHTRFTDLQDNNNDL VNLRQRIKEQQSRGEPQDGVISNRFKTLGQKDDQDVSDLQRLRDKVKAEQARGEGEQG VINDRLKKLLAEKGTSTNSRQREESSATEDESSASVSSARPFFKRKLVARRPYTPTSG SGGTTKAPLAFSTTRPTAKFVRKKNGRFDPFNSSVRNRGEGFVRSDPRGSRLPGADRF KSQSEDGEEVEERHVQNQFATTLRRPFVPKTRSEVTKPQQVGDEEGSEEEDDEEEEED SEEEGGDEEEDEEEDEAAEKNQPEEEEKKSQNNPYKPKDNRVLPGSRPTFGATGSGPT GSAGNVPFNPRQRPSSSSSIAPPANRFGTTKRPRVVNRPPGVASPNLTLKPVASDYER TTPLTLLKPAPFIPSNNRSYERKYTGPSTEASETASENSLIEELNIDALNARNKKIFD KHSKKHPALKPKVVKVEEVETGTEAVAVEEETTEEQQQEQGFVTTTPSTPLAPPPPST QSDTPATTTTDTTPPETETETETETEIETVTETETATNANEATSINSQDQSSSSNSSS TTQAPPPATTLLHVFTLLEGEGESENEGETTTTTRRPTQKARLHPTVQTEVVPKHKLI EINRIVEINSKQAKAAQRKSKANQDFGTLRVESLPHVEQLGEISVVKYVHLVDGSDIQ INDGHSTVADYTPTEPNFSASSAPVRNSLPETETTDTETDRSGKSLVPEVLTGALETS TISLEGLFDSARKGKQLSSNSIISETEESTTISSSSAAATETTGETTTPAPTYVRPIV PLLRPESNESSPLVISIANLDQVILSKVQKSLAEKSRTPADSSDSNSAFSLRQPLVVQ APEAANTNTLNTEDQTVNGAVQTTTTRPSDDQVAEETTIFSIETATEPQISTQITQDS ETLTARPIGAVIMGQLGLNTQTTTTADNGNQENTQTTSTISSADNNNNNSHQENTQTT ISGAISSEAISNKNNNHLTLDTQTTVTKNSPENTQTTTTTTTIGAISGAIGGSINPST QVTTTTNSNSTTTSSSSTTTTVGSKVSEAVSFSSESHVVHRKKMGRKGRGRRLRNRKT TTTTTTTETPTTVEASLDDTTTVVPE" misc_feature 233..1351 /gene="Cht6" /note="This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active...; Region: GH18_chitolectin_chitotriosidase; cd02872" /db_xref="CDD:119351" misc_feature order(242..244,254..256,470..475,587..589,593..598, 734..739,806..808,812..817,830..832,983..985,989..991, 1073..1075,1271..1273) /gene="Cht6" /note="active site" /db_xref="CDD:119351" misc_feature 1664..1834 /gene="Cht6" /note="Chitin binding Peritrophin-A domain; Region: CBM_14; pfam01607" /db_xref="CDD:426342" misc_feature 6953..>7579 /gene="Cht6" /note="MSCRAMM family adhesin clumping factor ClfA; Region: MSCRAMM_ClfA; NF033609" /db_xref="CDD:468110" polyA_site 8499 /gene="Cht6" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agcggcgact ctcgaacgca gcaacatcag cagcagcaac agcaacagca acagcgacag 61 cagcaacacc attgccagca gcaacatcta gcccaaagga gccttgtatt gccacctcga 121 ccagcaaaaa gccgccaaaa tgcttccgtt ccggcgtgga gcggcctggc aaacgctctt 181 cctgctctgc gctctcgcct attgcataaa tgaagccagc agcgagggtc gcgtggtctg 241 ctactacaca aactggagtg tctatcggcc gggcaccgcc aagttcaatc cgcagaacat 301 caatccatac ctgtgtacac atttggtgta cgcattcggt ggattcacga aggacaacca 361 gatgaagccc tttgacaagt accaggacat cgagcagggt ggctatgcca agttcactgg 421 actcaaaacg tacaacaaac agctgaagac catgattgcc atcggcggtt ggaacgaggc 481 gagttccaga ttttcgcccc tggtggcgag caacgagcgc cgccagcagt tcatcaagaa 541 catcctgaag ttcctgcgcc agaaccactt cgatggcatc gatctcgact gggagtatcc 601 ggctcatcgc gagggcggca agtcccgcga tcgcgacaac tatgcccagt ttgtccagga 661 gctgcgggcc gagttcgaaa gggaggcgga gaaaacggga cgcacccgac tcctgctcac 721 catggccgtg cccgccggca tcgagtacat cgacaagggc tacgatgtgc ccaagctgaa 781 caagtatctg gattggttca atgtgctcac ctacgacttc cactcctccc acgagccgtc 841 ggtcaaccac cacgctccgc tctattcgct ggaggaggat tccgagtaca actacgatgc 901 cgagctgaat attgactact ccattaaata ctacctgaaa gcgggtgccg atcgggacaa 961 gctggtcctg ggcattccca cctatggacg atcctacact ttgatcaacg aggagagcac 1021 cgaactgggg gcaccttccg agggtccggg agagcagggt gatgccacgc gcgaaaaggg 1081 atacctggcc tactatgaaa tctgtcagac cctcaaggac gatcccgagt ggacggtggt 1141 gcagccgaat gccaatgtga tgggtcccta cgcctacagg cgcaaccagt gggtgggcta 1201 cgatgacgag gccattgtgc gcaagaaggc cgagtatgtg gtggcccagg gactgggcgg 1261 cattatgttc tgggccatcg acaacgacga tttccgcggc acctgcaacg gcaagcccta 1321 tccgctcatc gaggcggcca aggaggccat ggtggaggca ctgggactgg gcatcaacga 1381 ggtggccaag ccaagtggtc cccagaaacc gtcgcgatct cgcagtcgcg acaatgccag 1441 caccaggaat cgtctgaatg gcaagaccga agccacgccc agttcaagga ggcccagtgc 1501 caccagaagg ccagccataa gctccaccag caccacccac gcaccgccac cgagcaccac 1561 cttcaagcta acggaggccg agggctcttc gctgtatatt ggaggcaggg cctccaccac 1621 accgccaccg cccacgactc ccgatccggg ctcggacttc aagtgcgagg aggagggctt 1681 cttccagcat cccagggact gcaagaaata ctactggtgc ctggacagtg gaccctctgg 1741 cctgggcatt gtggctcaca tgttcacctg tccgtcggga ctctacttca atccggccgc 1801 cgattcctgc gactttgcac gcaatgtgcc ctgcaagacc aaaaaatcca ccacagcggc 1861 accggcagtg agctccacca caccgctgac caccacagtg cgttcgaatc gggtgactgc 1921 ggcgcccaca gctcgtcccg tttatccacg aaccaccagc agcactagca ccaccagcac 1981 tacaaccacc accacaacaa ccaccccgtc gtctgttgat gaagatttgg agtacgagga 2041 ggacaccgat gagctgtcgc ccagcaagtc gagcgatgcc gaggaggatc cgcaggtgat 2101 caaggagctg atcgatctga ttcgcaaggt gggcggtgtg gagcagctgg agaagcatct 2161 gctgcgcaac aaggatggct ccattacgtt gaaggagaat tccgcgagtg gtgcggccac 2221 cacaccttct actattagta aatctctgta cgatcgtgtg ttgagtcgac ctggcacttt 2281 gagttccttc acccgcaatc gcttcaagat cagcgaagcc accgagacga gcacggaggc 2341 cagctcttct ttgagtagct cttcgagtgg ctcatcgagt ggctcatcga gtggccaata 2401 ctccaaatac tcctccgtcc tgaggggcaa cagccgccag ggtccacaga acgagggcat 2461 tgaaaagttg gccgagttcg atggcttcct gaaggagcgc aagcaatatg tgaccatcaa 2521 tcgccatcga tcggcgagtc agggcgatga ggagcaggag gaggatcagc aggaggagga 2581 ggagaacctg gccgaggttc aaacaacaac cacccgtcgt ccgctgagct cagtcacccc 2641 ctcttacacg agtctcagac gcaccaggcc caccacagtg gcaccgccgg cagaacaaca 2701 accacagcag caggaggaga aggaggcggt ggagcaacag acccagactc aggtcaaatc 2761 ctatgccacc ttgagtcgca cgcgtggacg caccactgca ccaccagagg tcacggaagc 2821 ggcgcccagt tcgacaacca atcgttacaa atactttgag cgtacgcgac ccaccaagag 2881 tgccagtgcc actgaggatg ccaacgatga gccgacggag gaccaggaag aggaggagta 2941 cgaggacgag caaaaggaca ttgttacggt acagagcaaa caaagcacaa acacacgtaa 3001 atatgcgagc atcggccgca gaacaacaac caccacaaca gcaacaccag aaactacaac 3061 aacaacaacc gccggcactg agactgccaa ggccagcacc accaccacca ccaacaagaa 3121 caacaaccac tacaacagca gcaataacaa ctacaacaat gtgaaactga ataacctaat 3181 accaacagaa gagaacaaca cagcaacacc cagcaccacc gcccaatccg aaaccaccac 3241 caccactaca actaacgaaa ccactgaacc aaatgaaagc acctcaacca caaccataac 3301 taataacctg cataccatca ccaccaccac caccacaccc acacccacac caattgtagc 3361 ctccactgtc ccaacaacaa caacaaccac ctccaatggc attagctcag actctctgct 3421 agccaccgag ctgagcgaag cctcgcccac cctccctcct tccaatcccg acatagaaac 3481 aaccacaccg acaacaacca cctcaaccac aacaacggaa tccgaactgg ccactacaac 3541 cacaccgaga acaacaacca caacaggcaa catcgaactg aatgacgtga acaacaacga 3601 cgtggacgag gacagcgagg taacgaaaac caagacccaa tacaagtatg cgaccaccaa 3661 ccgtcgacgt ataaccacaa caacaacaac caccaccaac aacaatgcag aagcagcgaa 3721 cgatgctagt ccaacaaacg gtttgagtag tttaaatagc attagaacca acccgggcag 3781 aaggaaaccc caatcagaac aacagaccac ccaaacaaca accaccgaac caaccatttc 3841 tagtccccga ccctttggtt atccccgacg tcgcacacga cccaccagca cagtcagcac 3901 tagcacaacc acaattcccc aaaccgataa taccgataat aataacaata ccgataataa 3961 cgataacgaa accggagcag ttgcgcaagt agtgaagaag acacgactat ctccagggga 4021 taggcccaag aatcgttatc aattgagccg caccagaggc agcaccacca acaccacccc 4081 aacaacacaa caacccccaa caacaaccac cacagccaga agactggcct ttgggggccg 4141 tcagcgtggc caggtaacta aactaaccct agtcgatgag cagactgaag aacacaaaga 4201 ggaagatgat gatggagaag aagaggagaa ggaggcggaa gaagactcca gcacaacaac 4261 aaccaccaca accaccagca gaccaacacc aaagcgcata cgtgtgctga aattccgcag 4321 acccttgaat agcaatagca atagtaccac tgtagatagc accactaata gcgccactga 4381 cactaataac ccagacacca ccacaccaac aacaaccaca ttgagccaaa gcagcaacac 4441 caccaccacc acaaacacca ctggcaacaa gcgtttccgc aaaattgtcc gcaaactgag 4501 gcctgtggtg gactcttcga gtaccgcgtc tagtgtggac aattccgagg aaaccacccg 4561 taaacctttc gttcccagcc acaccagatt cacggatttg caggacaaca acaacgatct 4621 ggtgaatctt cgccagcgga tcaaggagca gcaatcacgg ggcgagccgc aggatggtgt 4681 gatcagcaat cgattcaaga ccctcggtca aaaggacgat caggatgttt cggatttgca 4741 gaggttgcgc gacaaggtga aggccgaaca ggcgagagga gagggtgagc agggtgtgat 4801 caacgatcgc ctgaagaagt tgctggccga aaagggcaca agtacgaatt ctcgccagag 4861 agaagaatcc tcggccacag aagacgagtc ttccgcgtcg gtttcctcgg ccagaccctt 4921 cttcaaacgc aaactggtgg cccgtcgacc ctatacacca acctcgggca gtggtggcac 4981 caccaaggca ccactcgcct tcagcaccac ccgacccacc gcgaagtttg tgcgcaagaa 5041 gaacggccgc ttcgatccct tcaactcgag tgttcgcaat cgcggcgagg gcttcgtgag 5101 aagcgatccc cgtggctcca gattgccggg agccgatcgc ttcaagagtc agtcggaaga 5161 cggtgaggag gtggaagaaa ggcatgtgca gaatcagttt gccaccacct tgcgacgacc 5221 ttttgtgccg aagacgcgat cggaggtgac taaaccacag caggttggag atgaagaggg 5281 cagtgaggaa gaagacgacg aggaagagga ggaggattcc gaggaagagg gcggcgacga 5341 agaggaggat gaggaagaag atgaggcggc tgagaagaat cagccggaag aggaggagaa 5401 aaagtcccag aacaacccgt acaagcccaa ggataaccgc gtgctgccgg gcagtcgacc 5461 cacctttgga gccaccggaa gtggacccac tggctccgca ggcaacgtgc ccttcaatcc 5521 ccgccagcgt ccatcatctt caagcagcat tgcaccaccg gccaaccgct ttggcaccac 5581 caagcgacca cgcgtcgtca accgaccacc cggagtggcc tcacctaact tgaccttgaa 5641 accggtggcc agtgattacg agcgcaccac accgctgacc cttttgaagc cggcaccctt 5701 tatacccagc aataatagga gctacgagcg aaaatacacg ggtccctcca cagaggcctc 5761 tgagacggcc agcgagaatt cgctgatcga agagctgaat atcgatgcgc tgaatgcgag 5821 gaacaagaag atcttcgaca agcacagcaa gaagcatccg gcactgaagc ccaaggtggt 5881 gaaggttgag gaggtggaaa ccggaacgga ggcggtggcg gtggaggagg aaaccaccga 5941 ggagcagcag caggaacagg gctttgtgac caccacaccc agtacaccac tagcaccacc 6001 accacccagc acacagtcag acacaccagc caccaccacc acagacacca cgccaccaga 6061 aacagaaact gaaactgaaa cagaaactga aatagaaact gtaaccgaaa ctgaaacagc 6121 gaccaatgct aatgaagcca cttccatcaa ttcacaggat caatcgagca gcagcaacag 6181 cagcagcacc actcaggcac caccgcctgc caccaccctg ctgcatgtgt tcaccctgct 6241 cgagggtgag ggtgagtccg agaatgaggg tgaaaccacc accacgacga gaaggccgac 6301 gcagaaggcc cgtcttcatc ccactgtgca aacggaggtg gtgcccaagc acaagttgat 6361 cgagatcaat cgcattgtcg agatcaattc gaagcaggcc aaggctgctc agcggaaatc 6421 gaaggctaat caggactttg gaacgctgcg cgtggaatcg ctgccccatg tggagcagct 6481 gggcgagatc agtgtggtga agtacgtcca tctggtggat ggaagtgata ttcaaatcaa 6541 tgatggccac agcacagtgg ctgattatac gcccacggag cccaacttct cagcttcgtc 6601 ggcacctgtg aggaattccc tgccagaaac ggaaacaacc gataccgaaa ccgatcgtag 6661 tggcaaatcc ttggttccag aagtgctgac cggcgccctg gagacctcga ccatctcgct 6721 ggagggacta ttcgattccg ccaggaaggg caagcaactg agcagcaata gcattatcag 6781 tgaaacagaa gagagcacca ccattagcag cagcagtgct gcggccaccg aaaccaccgg 6841 ggagacaacc acaccggcac ccacttacgt aagacccatt gtacccctcc tacgacccga 6901 gtccaatgag tcctcgcccc tggtcatttc gatagccaat ctcgatcagg tgattctgag 6961 caaggtgcaa aagtcgctgg ccgagaagag ccgaacccct gccgattctt ctgactcaaa 7021 ttcggccttc tcgctgcgcc agccgctggt ggtgcaggct ccagaagccg caaacacgaa 7081 cacactcaac actgaagatc aaacggtcaa tggtgctgtg caaacaacaa ccactaggcc 7141 atcagacgat caggtggctg aagagaccac aatctttagc attgagaccg ccactgagcc 7201 acagattagt acacaaataa cacaagacag tgaaacacta acagccaggc caattggtgc 7261 tgtgattatg ggtcagcttg gtctaaacac acaaacaaca accaccgctg acaacggcaa 7321 tcaggaaaat actcaaacaa cgagcacaat tagcagtgct gacaacaaca acaacaacag 7381 ccaccaagaa aatactcaaa caacaatcag tggcgctatt agttccgaag ctattagtaa 7441 caagaacaac aaccacctga cactcgatac acaaacaaca gtcaccaaaa acagtccaga 7501 aaatacgcaa acaacaacaa ccacaaccac aattggcgca attagtgggg ctattggtgg 7561 cagcataaat ccgagcacac aagtaacaac aaccaccaat agcaatagca ccaccactag 7621 cagcagcagc accacaacca cagtgggcag caaagttagc gaggcagtta gctttagttc 7681 ggagtcgcat gtggtgcatc gcaaaaagat ggggcgcaag gggcgtggcc gacgcctgcg 7741 caaccgcaaa acaacgacaa caacaacaac cacagagacg ccgaccacgg tggaggcgtc 7801 gcttgacgac accaccacgg tggttccgga ataggtcaca aaaagaacca caaaacaacc 7861 agagaaaatc agcgtagtta gttatttcta gtcttagccc ttatcttatc cacagaagag 7921 agtcttctgc gaaattaacc cttttgttgc caaaacctta gataattggc tgcgttgctt 7981 tggcttaaca acaacaacca tggcaagaaa atcaaaaatc aaattaagta aacaaccatt 8041 tcggctgctt ttaaactctt tccaaatttc ccagtgctgc tgcttttaat ttgaatactc 8101 tactatatat atctattttt ttttttgcta tgtaaattat ttaaacaatt cgtattcttc 8161 gagctgccat acctaaacaa caacaacacc cacacaacat atacatccac tcacacacat 8221 tcgttcacac atgcagatgc gaaaagtctt tccttggttc aaatatagaa tagaaatcta 8281 gaaatctaga caaacaacga ccctcagtgg atgcaaaatc ttgatcaact tgaagtaact 8341 cttaatggct tttaccaggc gcagttctct ctcacaattc tatctctttg ctaatcaatt 8401 tttttcactc tttccccctc tatccgaaat actttaagtc tagctttagt tgtaaaatat 8461 ttatgcacaa caataaaata atgaacaaaa agaaacaaa