Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_070218261 2734 bp mRNA linear INV 09-DEC-2024 (su(w[a])), transcript variant X2, mRNA. ACCESSION XM_070218261 VERSION XM_070218261.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2734 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2734 /gene="su(w[a])" /note="suppressor of white-apricot; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108063852" CDS 298..2643 /gene="su(w[a])" /codon_start=1 /product="protein suppressor of white apricot isoform X2" /protein_id="XP_070074362.1" /db_xref="GeneID:108063852" /translation="MMVPPLGMQLPETMKQHAIIEKTARFIATQGAQMEILIKAKQAN NNQFDFLTQGGHLQPYYRHLLAAIKAAKFPPAPEATLDQQQQQTGQDQESNPSTNDVH GEDGAGGGRRNSNQVVITVPTIKYKPSANCAYTQLISKIKGVPLQAVLLEDESSNPGN SQHSGTDSPTPSCRSEGHNSQGGGEFTPVLLQYNGSTFTHETETPQDDNENNSREPPQ VELLKNTSALALAQNYSSESDDEEEEEPEKEPEKKPEPVLTFPVPEESLRHIIDKTAT YVIKNGRQFEETLRTKSVERFSFLLPANEFYAYYLYKVTGDVDAASKEEKTRKAAAVA AALMSKKGLSFGGAAAAALGTGNNLDKAPVSFSIRARDEHGPLQPTLPQETSDEEASS MAGGGGEQVRPGMPDSVQRAIKQVETQLLARTAGQKSSAAPSSCSSPQKEQRQAEERV KDKLAQIAREKLNGMISREKQLQLERKRKAMAFLNQIKGEGATVGSAVTGTAPNPPEA AAGASQSAGGESDNESNDESVRSIPITFFGPDDDDEVGDDDQKEPEVRLERRAKEDEE DDDEEDEDDDGDLEKYNLLNDDSTNTFTSKPAPSLVAPPPPAAASAVPAPAVLLSDDD DVQLVATSSSSRSSRSRPRKMPRRSMSRSRNGRSRSRSASSASSRESSHRRRQKSSKP SKEPSSSIAARKSQSQSTQRRKGSPKKRRRSRSRSRSRSHRRSRSRSSISRTNRRSRS RSYSGGSREAEQRHRQQQQRRRTPTKKSHKRHKRRRRSSSP" misc_feature 349..501 /gene="su(w[a])" /note="Surp module; Region: Surp; pfam01805" /db_xref="CDD:460339" misc_feature 1099..1239 /gene="su(w[a])" /note="Suppressor-of-White-APricot splicing regulator; Region: SWAP; smart00648" /db_xref="CDD:197818" polyA_site 2734 /gene="su(w[a])" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 catcggtacg gtcacgctgc acctctagca tttttatttc gcacgcaaaa taaaaataat 61 ggaaagaaat tgaccaaatc cggccgtaaa atgcgatcct ccagatccta gatccccgaa 121 atcttggtac aaaaggagga cctcaagcgg ctgcagcagg agacctccgg cggcaactac 181 agccaggtgg gcttccagta cgatggccag tccgcggcct cagcctccac ggcgccctcg 241 cagctctcgc cgacctccga ggagaacgag ctgcccttcg tcctgcccta cacgctgatg 301 atggtgcctc cgttgggcat gcagctgccg gaaacgatga agcagcacgc cattattgag 361 aagacagctc gcttcatcgc cacccagggt gcccagatgg agatcctgat caaggcgaag 421 caggcgaaca acaaccaatt cgatttcctc acccagggtg gccacttgca gccgtactac 481 cgtcaccttt tggccgccat caaggcagcg aaattcccgc ccgctccgga ggccacgttg 541 gatcagcagc agcagcagac tggccaggac caggaatcga atccatcaac gaacgatgta 601 catggcgagg acggagcggg cggaggaagg aggaacagca accaagtggt catcacggtg 661 cccactatta agtacaaacc ctcggcgaac tgcgcctaca cccagctaat tagcaagatc 721 aagggcgttc ccctgcaggc tgttttgctg gaggacgagt cgagtaatcc cgggaattcg 781 cagcactcgg gcacggattc acccacgccc agctgccgat ccgaaggtca caacagccag 841 ggcggcgggg aattcacgcc cgtgctgctg cagtacaacg ggagtacctt cacccatgag 901 acggagacgc cgcaggatga caacgagaac aacagtcgcg agccgccgca ggtggagctg 961 cttaagaaca cgagtgccct ggccctggcc caaaactata gttccgaaag cgatgatgaa 1021 gaggaggagg agccggaaaa ggaacccgaa aagaaacccg agcccgtctt gacctttccc 1081 gttccggagg agagtctgcg gcacataatc gacaagacgg ccacgtatgt gatcaagaac 1141 ggacggcaat tcgaggagac gctgcgcacg aagagcgtgg agcggtttag tttcctgctg 1201 ccggcgaatg agttctatgc ctactacttg tacaaggtga ccggcgatgt ggatgcggca 1261 tccaaggagg agaagactcg caaagcggcc gccgtggcag ctgccctgat gtccaagaag 1321 ggactcagct ttggcggagc ggcagctgct gctctaggaa ctggcaacaa tctggataag 1381 gctcctgtaa gtttctccat tcgcgctcgg gatgagcatg gtccattgca acccactctt 1441 ccgcaggaga ccagcgacga ggaggccagt tcgatggccg gtggcggcgg ggagcaagtg 1501 cgtccgggca tgccggatag tgtgcagcgg gccatcaagc aggtggagac gcaattgttg 1561 gccaggaccg ccggtcagaa gtcgtcagcc gccccatcct cgtgttcctc gccgcaaaaa 1621 gagcagcgac aagctgagga gcgcgtaaag gacaaactgg cgcaaatcgc ccgcgagaag 1681 ctgaacggaa tgatttcccg cgagaaacaa ttgcaattgg agcgaaaacg caaggccatg 1741 gcctttctca atcagatcaa aggtgagggt gccactgtgg gttcagcggt gaccggtact 1801 gctcctaatc ctccagaggc tgcggcaggt gcttcgcaat cggcaggcgg tgaaagtgac 1861 aatgagtcca acgacgaatc ggttcgatcc atacccatca cattctttgg acccgacgac 1921 gatgacgagg tgggagatga tgatcagaag gagcctgagg tgagactcga aaggagagcg 1981 aaggaggatg aggaggacga cgacgaagag gacgaggatg acgatggcga tctggagaag 2041 tacaatctgc taaacgatga tagcacaaac accttcacca gcaaacccgc accttcgctc 2101 gtggctcctc ctcctcctgc cgctgcttcc gccgtccccg cccctgccgt tcttctctcc 2161 gacgacgacg acgtccagct ggtggccacg tcctcctcct cgcgatcctc ccggtcgcgt 2221 ccccgtaaaa tgccccgccg gagcatgagt cgcagccgga atggtcgcag cagaagtcgc 2281 agtgccagca gtgcttccag tcgagaatcc tcccaccgac ggcgccagaa aagcagcaaa 2341 ccttccaagg agccatcatc ctcgatcgcg gcccgaaaat cccagtcgca gtcaacgcag 2401 cgaagaaaag gaagcccaaa gaagaggagg cgcagcagga gtagaagccg atcaaggagc 2461 caccgacgga gtagaagcag aagcagcata tcacgcacca ataggcggag cagatcgcgt 2521 agctactccg gcggaagtcg ggaggcggaa cagcgacacc ggcagcagca gcagaggcgc 2581 cgcacgccca ccaagaagtc gcacaagcgg cacaagcgac gcaggcgcag cagctccccc 2641 tgatgatcca gatccaaatc cacctccaca tttcaaagtt ttttgtagtt cacaagttgt 2701 atcaaataaa ccaccaacat atttttgtaa acaa