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LOCUS XM_070218260 3810 bp mRNA linear INV 09-DEC-2024 transcript variant X17, mRNA. ACCESSION XM_070218260 VERSION XM_070218260.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3810 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3810 /gene="dnc" /note="phosphodiesterase dunce; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins" /db_xref="GeneID:108059389" CDS 531..2099 /gene="dnc" /codon_start=1 /product="3',5'-cyclic-AMP phosphodiesterase isoform X14" /protein_id="XP_070074361.1" /db_xref="GeneID:108059389" /translation="MASLKFKRMLNKELSHFSESSRSGNQISEYICSTFLDKQQEFDL PSLRVEDNPELVAANAAASGQQSAGQYARSRSPRGPPMSQISGVKRPLSHTNSFTGER LPTFGVETPRENELGTLLGELDTWGIQIFSIGEFSVNRPLTSVAYTIFQSRELLTSLM IPPKTFLNFMTTLEDHYVKDNPFHNSLHAADVTQSTNVLLNTPALEGVFTPLEVGGAL FAACIHDVDHPGLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLLQNQGCDIFCNM QKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAGSGVLLLDNYTDRIQVL ENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESGMDISPMCDRHNATIEKS QVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSMIPPSPPPSGVDENPQED RIRFQVTLEESDQENLAELEEGDESGGESTTTGTTGTTAASALGGAGGGGGAGGGVAP RTGGCQNQPQHGGM" misc_feature <531..641 /gene="dnc" /note="Phosphodiesterase 4 upstream conserved regions (UCR); Region: PDE4_UCR; pfam18100" /db_xref="CDD:465648" misc_feature 1077..1799 /gene="dnc" /note="3'5'-cyclic nucleotide phosphodiesterase; Region: PDEase_I; pfam00233" /db_xref="CDD:459723" polyA_site 3810 /gene="dnc" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 acacaagtta aatagtttca acaaaatata ggaaaaaaga aaaataaatt aaataaatta 61 gcaaaatttt cgtttaaaat tcttcgtgtt tatttatggt cttgttttcg ctgtttttgg 121 caatgcatca aagagtctct gaaacttgta cgctgtaaga ggatttggtt ggccgacttt 181 tatagatttc caaacacact ttgcgattat aatggcaaat tacaggccaa tggggagaac 241 atcaatggtt aatcaaaagc catggcgagg atctcattgt gacgcctttc gcccaaattt 301 tagccagctt acgttcagtg cgcaacaatt tattaagtct gacaaatgtt ccagcatcaa 361 acaagcggcc caaccaatcc tcgtcggcct cccgatcggg aaatccctcg ggagccccgc 421 tgtcccaggg cgaggaggcc tacacccgcc tggccaccga caccatcgag gagctggact 481 ggtgcctcga ccagctggag accatccaga cccatcgcag cgtctccgac atggcttcgc 541 tcaagttcaa acgcatgctc aacaaggagc tgtcacactt cagcgagtcc agcagatcgg 601 gaaatcagat ttccgagtac atttgttcca catttttgga caagcagcag gagttcgact 661 tgccgtcgct gcgcgtggag gataatccgg agctggtggc cgccaatgcc gccgccagcg 721 gccagcagtc cgctggccag tacgcccgct cccgctcccc ccgcggcccg cccatgtcgc 781 agatcagcgg cgtgaagcgg cccctttcgc acaccaacag cttcaccggc gaacggctgc 841 ccaccttcgg cgtggagacg cccagggaga acgagctggg caccctgctc ggcgaactgg 901 acacctgggg catccagata ttcagcatcg gcgagttcag cgtcaaccga ccgctcacca 961 gtgtggcata caccatattt cagagtagag aattactgac cagtcttatg ataccaccga 1021 aaacttttct taactttatg actactctgg aggaccacta cgtcaaagac aatccgtttc 1081 acaattcgct gcatgccgcc gacgtgaccc agagcaccaa tgtgctactc aatacaccgg 1141 cgctggaggg cgtattcaca ccgctcgagg tgggcggggc actgttcgcc gcttgcatcc 1201 acgatgttga tcatcccggc ttaaccaatc agttcttggt taactcaagt tccgaactag 1261 cattaatgta caatgacgaa tctgttttgg aaaatcatca tttagctgtt gcctttaaat 1321 tattgcaaaa tcaaggatgt gatatattct gtaatatgca aaagaaacaa cgccaaacat 1381 tgaggaaaat ggttattgat attgtgctgt ccacggacat gtccaagcac atgagtctgc 1441 tggccgacct gaagacaatg gtggaaacca agaaggtggc cggctccgga gtcctgctgc 1501 tggacaacta caccgatcgc atacaggtgc tcgagaatct ggtgcactgc gccgatctga 1561 gcaatcccac caagccgctg ccgctttaca agcgctgggt ggccctgctc atggaggagt 1621 tcttcctgca gggcgacaag gagcgcgagt cgggcatgga catcagtccc atgtgcgatc 1681 gccacaacgc caccatcgag aagtcgcagg tgggcttcat cgactatatc gtccacccgc 1741 tgtgggagac ctgggcggac ctggtgcacc cggacgccca ggacatactc gacacgcttg 1801 aagagaacag agactactac cagagcatga taccgccctc gccgccgccg tcgggggtcg 1861 atgagaatcc gcaggaggac aggatacgct ttcaagtaac cctggaggag tccgaccagg 1921 agaacctcgc cgagctggag gagggcgacg agagtggcgg cgagagcacc accaccggaa 1981 caaccggaac caccgccgcc tccgcgctgg gcggggctgg gggcggtggc ggtgctggcg 2041 ggggcgtggc acccaggacg ggtggctgcc aaaaccaacc gcagcacggt ggaatgtgac 2101 ggagagtcgt gggaatttat cgcaaaatac aggaaaaggc tcacaacttt ttcctattac 2161 gttagtgact actattaaca cacaaaaacc aaacaaaaac caaaaacgaa aaactcaaaa 2221 aaaaacaaag aaaaactctt ggaaaaatgc aaaaaaaaaa tacaaaaaaa aaccaaaaag 2281 ccaactaaag aaatattaaa caaatgttta aagcatacaa agaatccaaa acagcaatag 2341 caaaagtacc gtttaactta taaagcctag agaaaaacga aaaaggaaat tagaaattta 2401 cttaatggaa caccgagatt gatgttgaaa atacactgaa aaaaagagat cacgaggaga 2461 tgagctaact aagagaaatc ttacatattg ttaaacgtac acacacacac taaatccaag 2521 acaaagcaaa gataatgaga aaccccattg ataagtaata ctaagaagat accaaaacta 2581 ccgccccctt cccccaatta tatagacgat ttttgttgca tgtgtaggca aatgattttt 2641 gttaaattca tctgaagtgg gacatcaatc ggagaaaaac cccctgagcc ccctaaccaa 2701 gtctcctctt ttaaaccatt gactaaagtg aaatatttaa aaacaagaaa aacaaccgaa 2761 cggaaggaat aattaatacg acttagctta agagaagttt ttaagttttg aatgttttgc 2821 atgcccgaac agattcattt tactcgattg ataacgttag atctaacttt agaccgatta 2881 acgctaacgg caacacacat atggaatttt ttatgattta gaccccagcg atagaagcga 2941 aaacaaaaag aaaaacaaaa actaaaacca accatgttaa gtgtaagaac ccagtgaatt 3001 aaaccaaaat tgaaagccac ccgagttaag accatttaat tcaaatctaa atccaaatcc 3061 cgaaccccaa acaacaaaga agaacagtct acagccagac tgtagttgta tagtaatata 3121 tatgatataa atattttttt ttaatattat ttgtaaataa tttaaatgtt ggactcgaat 3181 ttaaatcaag cggctagcaa atgttgcagc caaactaaaa ctaaaatgaa aacaaagcca 3241 aaaacacata aataacataa ataaggaagt aagtggagag aaaaaaagga aggtggaaaa 3301 gaaaggaaaa actattgtac aattagctaa agaatttcca tttcaatttt cgattttcga 3361 tttgaattgc aatttgattt gcttccagaa aacaagagaa agagaaagat gataaagata 3421 tagaaaagga aaggagaaga gatgagaaga aaagaaatta gagagagata aaccgaaaat 3481 aatgtcaaac gctgtcttcg caaatatttt tcgctatata tttacttata tcattattta 3541 ctagttacta agctacttac tgagccacac aatttaaaaa cgaaagagac aagacacccg 3601 gtcgagaaag agagggagca tcgatgaatt tagtgaacaa acattaaact tactggcaga 3661 aagcacacaa tttacaaacc acaaagcaaa ccaccagaaa agactcttca agcacaagca 3721 atttttagtt ttccaaatga aaaatgaaaa accaaagcaa agcaaaacca acacacaaag 3781 gaaaagcaaa acaagaaaaa acaaaaaaca