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LOCUS XM_070218259 3707 bp mRNA linear INV 09-DEC-2024 transcript variant X16, mRNA. ACCESSION XM_070218259 VERSION XM_070218259.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3707 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3707 /gene="dnc" /note="phosphodiesterase dunce; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins" /db_xref="GeneID:108059389" CDS 98..1996 /gene="dnc" /codon_start=1 /product="3',5'-cyclic-AMP phosphodiesterase isoform X13" /protein_id="XP_070074360.1" /db_xref="GeneID:108059389" /translation="MVLFSLFLAMHQRVSETCTLHGEDLIVTPFAQILASLRSVRNNL LSLTNVPASNKRPNQSSSASRSGNPSGAPLSQGEEAYTRLATDTIEELDWCLDQLETI QTHRSVSDMASLKFKRMLNKELSHFSESSRSGNQISEYICSTFLDKQQEFDLPSLRVE DNPELVAANAAASGQQSAGQYARSRSPRGPPMSQISGVKRPLSHTNSFTGERLPTFGV ETPRENELGTLLGELDTWGIQIFSIGEFSVNRPLTSVAYTIFQSRELLTSLMIPPKTF LNFMTTLEDHYVKDNPFHNSLHAADVTQSTNVLLNTPALEGVFTPLEVGGALFAACIH DVDHPGLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLLQNQGCDIFCNMQKKQRQ TLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAGSGVLLLDNYTDRIQVLENLVHC ADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESGMDISPMCDRHNATIEKSQVGFID YIVHPLWETWADLVHPDAQDILDTLEENRDYYQSMIPPSPPPSGVDENPQEDRIRFQV TLEESDQENLAELEEGDESGGESTTTGTTGTTAASALGGAGGGGGAGGGVAPRTGGCQ NQPQHGGM" misc_feature 176..538 /gene="dnc" /note="Phosphodiesterase 4 upstream conserved regions (UCR); Region: PDE4_UCR; pfam18100" /db_xref="CDD:465648" misc_feature 974..1696 /gene="dnc" /note="3'5'-cyclic nucleotide phosphodiesterase; Region: PDEase_I; pfam00233" /db_xref="CDD:459723" polyA_site 3707 /gene="dnc" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ccacacaagt taaatagttt caacaaaata taggaaaaaa gaaaaataaa ttaaataaat 61 tagcaaaatt ttcgtttaaa attcttcgtg tttatttatg gtcttgtttt cgctgttttt 121 ggcaatgcat caaagagtct ctgaaacttg tacgctccat ggcgaggatc tcattgtgac 181 gcctttcgcc caaattttag ccagcttacg ttcagtgcgc aacaatttat taagtctgac 241 aaatgttcca gcatcaaaca agcggcccaa ccaatcctcg tcggcctccc gatcgggaaa 301 tccctcggga gccccgctgt cccagggcga ggaggcctac acccgcctgg ccaccgacac 361 catcgaggag ctggactggt gcctcgacca gctggagacc atccagaccc atcgcagcgt 421 ctccgacatg gcttcgctca agttcaaacg catgctcaac aaggagctgt cacacttcag 481 cgagtccagc agatcgggaa atcagatttc cgagtacatt tgttccacat ttttggacaa 541 gcagcaggag ttcgacttgc cgtcgctgcg cgtggaggat aatccggagc tggtggccgc 601 caatgccgcc gccagcggcc agcagtccgc tggccagtac gcccgctccc gctccccccg 661 cggcccgccc atgtcgcaga tcagcggcgt gaagcggccc ctttcgcaca ccaacagctt 721 caccggcgaa cggctgccca ccttcggcgt ggagacgccc agggagaacg agctgggcac 781 cctgctcggc gaactggaca cctggggcat ccagatattc agcatcggcg agttcagcgt 841 caaccgaccg ctcaccagtg tggcatacac catatttcag agtagagaat tactgaccag 901 tcttatgata ccaccgaaaa cttttcttaa ctttatgact actctggagg accactacgt 961 caaagacaat ccgtttcaca attcgctgca tgccgccgac gtgacccaga gcaccaatgt 1021 gctactcaat acaccggcgc tggagggcgt attcacaccg ctcgaggtgg gcggggcact 1081 gttcgccgct tgcatccacg atgttgatca tcccggctta accaatcagt tcttggttaa 1141 ctcaagttcc gaactagcat taatgtacaa tgacgaatct gttttggaaa atcatcattt 1201 agctgttgcc tttaaattat tgcaaaatca aggatgtgat atattctgta atatgcaaaa 1261 gaaacaacgc caaacattga ggaaaatggt tattgatatt gtgctgtcca cggacatgtc 1321 caagcacatg agtctgctgg ccgacctgaa gacaatggtg gaaaccaaga aggtggccgg 1381 ctccggagtc ctgctgctgg acaactacac cgatcgcata caggtgctcg agaatctggt 1441 gcactgcgcc gatctgagca atcccaccaa gccgctgccg ctttacaagc gctgggtggc 1501 cctgctcatg gaggagttct tcctgcaggg cgacaaggag cgcgagtcgg gcatggacat 1561 cagtcccatg tgcgatcgcc acaacgccac catcgagaag tcgcaggtgg gcttcatcga 1621 ctatatcgtc cacccgctgt gggagacctg ggcggacctg gtgcacccgg acgcccagga 1681 catactcgac acgcttgaag agaacagaga ctactaccag agcatgatac cgccctcgcc 1741 gccgccgtcg ggggtcgatg agaatccgca ggaggacagg atacgctttc aagtaaccct 1801 ggaggagtcc gaccaggaga acctcgccga gctggaggag ggcgacgaga gtggcggcga 1861 gagcaccacc accggaacaa ccggaaccac cgccgcctcc gcgctgggcg gggctggggg 1921 cggtggcggt gctggcgggg gcgtggcacc caggacgggt ggctgccaaa accaaccgca 1981 gcacggtgga atgtgacgga gagtcgtggg aatttatcgc aaaatacagg aaaaggctca 2041 caactttttc ctattacgtt agtgactact attaacacac aaaaaccaaa caaaaaccaa 2101 aaacgaaaaa ctcaaaaaaa aacaaagaaa aactcttgga aaaatgcaaa aaaaaaatac 2161 aaaaaaaaac caaaaagcca actaaagaaa tattaaacaa atgtttaaag catacaaaga 2221 atccaaaaca gcaatagcaa aagtaccgtt taacttataa agcctagaga aaaacgaaaa 2281 aggaaattag aaatttactt aatggaacac cgagattgat gttgaaaata cactgaaaaa 2341 aagagatcac gaggagatga gctaactaag agaaatctta catattgtta aacgtacaca 2401 cacacactaa atccaagaca aagcaaagat aatgagaaac cccattgata agtaatacta 2461 agaagatacc aaaactaccg cccccttccc ccaattatat agacgatttt tgttgcatgt 2521 gtaggcaaat gatttttgtt aaattcatct gaagtgggac atcaatcgga gaaaaacccc 2581 ctgagccccc taaccaagtc tcctctttta aaccattgac taaagtgaaa tatttaaaaa 2641 caagaaaaac aaccgaacgg aaggaataat taatacgact tagcttaaga gaagttttta 2701 agttttgaat gttttgcatg cccgaacaga ttcattttac tcgattgata acgttagatc 2761 taactttaga ccgattaacg ctaacggcaa cacacatatg gaatttttta tgatttagac 2821 cccagcgata gaagcgaaaa caaaaagaaa aacaaaaact aaaaccaacc atgttaagtg 2881 taagaaccca gtgaattaaa ccaaaattga aagccacccg agttaagacc atttaattca 2941 aatctaaatc caaatcccga accccaaaca acaaagaaga acagtctaca gccagactgt 3001 agttgtatag taatatatat gatataaata ttttttttta atattatttg taaataattt 3061 aaatgttgga ctcgaattta aatcaagcgg ctagcaaatg ttgcagccaa actaaaacta 3121 aaatgaaaac aaagccaaaa acacataaat aacataaata aggaagtaag tggagagaaa 3181 aaaaggaagg tggaaaagaa aggaaaaact attgtacaat tagctaaaga atttccattt 3241 caattttcga ttttcgattt gaattgcaat ttgatttgct tccagaaaac aagagaaaga 3301 gaaagatgat aaagatatag aaaaggaaag gagaagagat gagaagaaaa gaaattagag 3361 agagataaac cgaaaataat gtcaaacgct gtcttcgcaa atatttttcg ctatatattt 3421 acttatatca ttatttacta gttactaagc tacttactga gccacacaat ttaaaaacga 3481 aagagacaag acacccggtc gagaaagaga gggagcatcg atgaatttag tgaacaaaca 3541 ttaaacttac tggcagaaag cacacaattt acaaaccaca aagcaaacca ccagaaaaga 3601 ctcttcaagc acaagcaatt tttagttttc caaatgaaaa atgaaaaacc aaagcaaagc 3661 aaaaccaaca cacaaaggaa aagcaaaaca agaaaaaaca aaaaaca