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LOCUS XM_070218258 3713 bp mRNA linear INV 09-DEC-2024 transcript variant X15, mRNA. ACCESSION XM_070218258 VERSION XM_070218258.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3713 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3713 /gene="dnc" /note="phosphodiesterase dunce; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins" /db_xref="GeneID:108059389" CDS 98..2002 /gene="dnc" /codon_start=1 /product="3',5'-cyclic-AMP phosphodiesterase isoform X12" /protein_id="XP_070074359.1" /db_xref="GeneID:108059389" /translation="MVLFSLFLAMHQRVSETCTLHGEDLIVTPFAQILASLRSVRNNL LSLTNVPASNKSRRPNQSSSASRSGNPSGAPLSQGEEAYTRLATDTIEELDWCLDQLE TIQTHRSVSDMASLKFKRMLNKELSHFSESSRSGNQISEYICSTFLDKQQEFDLPSLR VEDNPELVAANAAASGQQSAGQYARSRSPRGPPMSQISGVKRPLSHTNSFTGERLPTF GVETPRENELGTLLGELDTWGIQIFSIGEFSVNRPLTSVAYTIFQSRELLTSLMIPPK TFLNFMTTLEDHYVKDNPFHNSLHAADVTQSTNVLLNTPALEGVFTPLEVGGALFAAC IHDVDHPGLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLLQNQGCDIFCNMQKKQ RQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAGSGVLLLDNYTDRIQVLENLV HCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESGMDISPMCDRHNATIEKSQVGF IDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSMIPPSPPPSGVDENPQEDRIRF QVTLEESDQENLAELEEGDESGGESTTTGTTGTTAASALGGAGGGGGAGGGVAPRTGG CQNQPQHGGM" misc_feature 176..544 /gene="dnc" /note="Phosphodiesterase 4 upstream conserved regions (UCR); Region: PDE4_UCR; pfam18100" /db_xref="CDD:465648" misc_feature 980..1702 /gene="dnc" /note="3'5'-cyclic nucleotide phosphodiesterase; Region: PDEase_I; pfam00233" /db_xref="CDD:459723" polyA_site 3713 /gene="dnc" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ccacacaagt taaatagttt caacaaaata taggaaaaaa gaaaaataaa ttaaataaat 61 tagcaaaatt ttcgtttaaa attcttcgtg tttatttatg gtcttgtttt cgctgttttt 121 ggcaatgcat caaagagtct ctgaaacttg tacgctccat ggcgaggatc tcattgtgac 181 gcctttcgcc caaattttag ccagcttacg ttcagtgcgc aacaatttat taagtctgac 241 aaatgttcca gcatcaaaca aatccaggcg gcccaaccaa tcctcgtcgg cctcccgatc 301 gggaaatccc tcgggagccc cgctgtccca gggcgaggag gcctacaccc gcctggccac 361 cgacaccatc gaggagctgg actggtgcct cgaccagctg gagaccatcc agacccatcg 421 cagcgtctcc gacatggctt cgctcaagtt caaacgcatg ctcaacaagg agctgtcaca 481 cttcagcgag tccagcagat cgggaaatca gatttccgag tacatttgtt ccacattttt 541 ggacaagcag caggagttcg acttgccgtc gctgcgcgtg gaggataatc cggagctggt 601 ggccgccaat gccgccgcca gcggccagca gtccgctggc cagtacgccc gctcccgctc 661 cccccgcggc ccgcccatgt cgcagatcag cggcgtgaag cggccccttt cgcacaccaa 721 cagcttcacc ggcgaacggc tgcccacctt cggcgtggag acgcccaggg agaacgagct 781 gggcaccctg ctcggcgaac tggacacctg gggcatccag atattcagca tcggcgagtt 841 cagcgtcaac cgaccgctca ccagtgtggc atacaccata tttcagagta gagaattact 901 gaccagtctt atgataccac cgaaaacttt tcttaacttt atgactactc tggaggacca 961 ctacgtcaaa gacaatccgt ttcacaattc gctgcatgcc gccgacgtga cccagagcac 1021 caatgtgcta ctcaatacac cggcgctgga gggcgtattc acaccgctcg aggtgggcgg 1081 ggcactgttc gccgcttgca tccacgatgt tgatcatccc ggcttaacca atcagttctt 1141 ggttaactca agttccgaac tagcattaat gtacaatgac gaatctgttt tggaaaatca 1201 tcatttagct gttgccttta aattattgca aaatcaagga tgtgatatat tctgtaatat 1261 gcaaaagaaa caacgccaaa cattgaggaa aatggttatt gatattgtgc tgtccacgga 1321 catgtccaag cacatgagtc tgctggccga cctgaagaca atggtggaaa ccaagaaggt 1381 ggccggctcc ggagtcctgc tgctggacaa ctacaccgat cgcatacagg tgctcgagaa 1441 tctggtgcac tgcgccgatc tgagcaatcc caccaagccg ctgccgcttt acaagcgctg 1501 ggtggccctg ctcatggagg agttcttcct gcagggcgac aaggagcgcg agtcgggcat 1561 ggacatcagt cccatgtgcg atcgccacaa cgccaccatc gagaagtcgc aggtgggctt 1621 catcgactat atcgtccacc cgctgtggga gacctgggcg gacctggtgc acccggacgc 1681 ccaggacata ctcgacacgc ttgaagagaa cagagactac taccagagca tgataccgcc 1741 ctcgccgccg ccgtcggggg tcgatgagaa tccgcaggag gacaggatac gctttcaagt 1801 aaccctggag gagtccgacc aggagaacct cgccgagctg gaggagggcg acgagagtgg 1861 cggcgagagc accaccaccg gaacaaccgg aaccaccgcc gcctccgcgc tgggcggggc 1921 tgggggcggt ggcggtgctg gcgggggcgt ggcacccagg acgggtggct gccaaaacca 1981 accgcagcac ggtggaatgt gacggagagt cgtgggaatt tatcgcaaaa tacaggaaaa 2041 ggctcacaac tttttcctat tacgttagtg actactatta acacacaaaa accaaacaaa 2101 aaccaaaaac gaaaaactca aaaaaaaaca aagaaaaact cttggaaaaa tgcaaaaaaa 2161 aaatacaaaa aaaaaccaaa aagccaacta aagaaatatt aaacaaatgt ttaaagcata 2221 caaagaatcc aaaacagcaa tagcaaaagt accgtttaac ttataaagcc tagagaaaaa 2281 cgaaaaagga aattagaaat ttacttaatg gaacaccgag attgatgttg aaaatacact 2341 gaaaaaaaga gatcacgagg agatgagcta actaagagaa atcttacata ttgttaaacg 2401 tacacacaca cactaaatcc aagacaaagc aaagataatg agaaacccca ttgataagta 2461 atactaagaa gataccaaaa ctaccgcccc cttcccccaa ttatatagac gatttttgtt 2521 gcatgtgtag gcaaatgatt tttgttaaat tcatctgaag tgggacatca atcggagaaa 2581 aaccccctga gccccctaac caagtctcct cttttaaacc attgactaaa gtgaaatatt 2641 taaaaacaag aaaaacaacc gaacggaagg aataattaat acgacttagc ttaagagaag 2701 tttttaagtt ttgaatgttt tgcatgcccg aacagattca ttttactcga ttgataacgt 2761 tagatctaac tttagaccga ttaacgctaa cggcaacaca catatggaat tttttatgat 2821 ttagacccca gcgatagaag cgaaaacaaa aagaaaaaca aaaactaaaa ccaaccatgt 2881 taagtgtaag aacccagtga attaaaccaa aattgaaagc cacccgagtt aagaccattt 2941 aattcaaatc taaatccaaa tcccgaaccc caaacaacaa agaagaacag tctacagcca 3001 gactgtagtt gtatagtaat atatatgata taaatatttt tttttaatat tatttgtaaa 3061 taatttaaat gttggactcg aatttaaatc aagcggctag caaatgttgc agccaaacta 3121 aaactaaaat gaaaacaaag ccaaaaacac ataaataaca taaataagga agtaagtgga 3181 gagaaaaaaa ggaaggtgga aaagaaagga aaaactattg tacaattagc taaagaattt 3241 ccatttcaat tttcgatttt cgatttgaat tgcaatttga tttgcttcca gaaaacaaga 3301 gaaagagaaa gatgataaag atatagaaaa ggaaaggaga agagatgaga agaaaagaaa 3361 ttagagagag ataaaccgaa aataatgtca aacgctgtct tcgcaaatat ttttcgctat 3421 atatttactt atatcattat ttactagtta ctaagctact tactgagcca cacaatttaa 3481 aaacgaaaga gacaagacac ccggtcgaga aagagaggga gcatcgatga atttagtgaa 3541 caaacattaa acttactggc agaaagcaca caatttacaa accacaaagc aaaccaccag 3601 aaaagactct tcaagcacaa gcaattttta gttttccaaa tgaaaaatga aaaaccaaag 3661 caaagcaaaa ccaacacaca aaggaaaagc aaaacaagaa aaaacaaaaa aca