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LOCUS XM_070218257 4601 bp mRNA linear INV 09-DEC-2024 transcript variant X14, mRNA. ACCESSION XM_070218257 VERSION XM_070218257.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4601 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4601 /gene="dnc" /note="phosphodiesterase dunce; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins" /db_xref="GeneID:108059389" CDS 959..2890 /gene="dnc" /codon_start=1 /product="3',5'-cyclic-AMP phosphodiesterase isoform X11" /protein_id="XP_070074358.1" /db_xref="GeneID:108059389" /translation="MSPKSMSRNSSIASERFKEQEASILVDRSHGEDLIVTPFAQILA SLRSVRNNLLSLTNVPASNKSRRPNQSSSASRSGNPSGAPLSQGEEAYTRLATDTIEE LDWCLDQLETIQTHRSVSDMASLKFKRMLNKELSHFSESSRSGNQISEYICSTFLDKQ QEFDLPSLRVEDNPELVAANAAASGQQSAGQYARSRSPRGPPMSQISGVKRPLSHTNS FTGERLPTFGVETPRENELGTLLGELDTWGIQIFSIGEFSVNRPLTSVAYTIFQSREL LTSLMIPPKTFLNFMTTLEDHYVKDNPFHNSLHAADVTQSTNVLLNTPALEGVFTPLE VGGALFAACIHDVDHPGLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLLQNQGCD IFCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAGSGVLLLDNYTD RIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESGMDISPMCDRHNA TIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSMIPPSPPPSGVDE NPQEDRIRFQVTLEESDQENLAELEEGDESGGESTTTGTTGTTAASALGGAGGGGGAG GGVAPRTGGCQNQPQHGGM" misc_feature 1064..1432 /gene="dnc" /note="Phosphodiesterase 4 upstream conserved regions (UCR); Region: PDE4_UCR; pfam18100" /db_xref="CDD:465648" misc_feature 1868..2590 /gene="dnc" /note="3'5'-cyclic nucleotide phosphodiesterase; Region: PDEase_I; pfam00233" /db_xref="CDD:459723" polyA_site 4601 /gene="dnc" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaaaattatt gttcatacgc aaagtgttgt gcggtcgcat cgcatcgcat atcgcatatc 61 gtgtgtgtgt gcgtgtgggt gcgtgtgtgt gtgcgcgcgc gccgcctaaa aataataata 121 aaaataaaaa acaaaacgaa aaaaacaaat cacaataata gtaaacaatg gatacgcgta 181 aaaatcgtaa atgctaaata ttcgtgctcc tcgcacgtgt gtgcaaaaca acaacaaaac 241 aacgcaaggg ggagagcaaa gagaagctgt aaattacata aaagaagcag cagaaataaa 301 gataacagag tggaatgata agcggcaagc agaaaaaagc cacaaaggga aaatacatca 361 aaaatattgc cagccgtaat tacagaaaat tgcggaaaat agaaatattg tatattccaa 421 aagtcgttta aaagttagtg cgaaataaac aaaacaaaaa tcaaacaaag ggcggcatcc 481 gaataaaagc aaaaagcgtg ctaacaaagc acaataaaac aaagcatatt aaagccaaga 541 aaatcgccaa agttgcaaca gaaaaaatac taccaaacat gctacaataa aaacccctca 601 gtgaaaatac aataaatcaa aatactccat ttaaaaccaa tattactaat taataactag 661 cgaacaatag aaacaaagac aatagcagag ccacaactaa aaatctaaaa acctaaatgt 721 agacaaatat acaatgagcg aaaacccaaa caaagaaagt ccagtagtga aaatagacca 781 gtaatcaaaa caagcttttg aaaacaagaa agataaccgt aattgcgatt tcgatgtaga 841 aaatggccag ggcgctcgat caccgctcga gggcggctct cccagcgccg gtttggttct 901 acagaatttg ccgcagcgtc gcgaatcgtt tctatatcgc tccgattccg actttgagat 961 gtcgcccaag tccatgtctc gaaactcaag catcgctagc gaaaggttta aagaacagga 1021 agcctctata ctcgttgacc gatcccatgg cgaggatctc attgtgacgc ctttcgccca 1081 aattttagcc agcttacgtt cagtgcgcaa caatttatta agtctgacaa atgttccagc 1141 atcaaacaaa tccaggcggc ccaaccaatc ctcgtcggcc tcccgatcgg gaaatccctc 1201 gggagccccg ctgtcccagg gcgaggaggc ctacacccgc ctggccaccg acaccatcga 1261 ggagctggac tggtgcctcg accagctgga gaccatccag acccatcgca gcgtctccga 1321 catggcttcg ctcaagttca aacgcatgct caacaaggag ctgtcacact tcagcgagtc 1381 cagcagatcg ggaaatcaga tttccgagta catttgttcc acatttttgg acaagcagca 1441 ggagttcgac ttgccgtcgc tgcgcgtgga ggataatccg gagctggtgg ccgccaatgc 1501 cgccgccagc ggccagcagt ccgctggcca gtacgcccgc tcccgctccc cccgcggccc 1561 gcccatgtcg cagatcagcg gcgtgaagcg gcccctttcg cacaccaaca gcttcaccgg 1621 cgaacggctg cccaccttcg gcgtggagac gcccagggag aacgagctgg gcaccctgct 1681 cggcgaactg gacacctggg gcatccagat attcagcatc ggcgagttca gcgtcaaccg 1741 accgctcacc agtgtggcat acaccatatt tcagagtaga gaattactga ccagtcttat 1801 gataccaccg aaaacttttc ttaactttat gactactctg gaggaccact acgtcaaaga 1861 caatccgttt cacaattcgc tgcatgccgc cgacgtgacc cagagcacca atgtgctact 1921 caatacaccg gcgctggagg gcgtattcac accgctcgag gtgggcgggg cactgttcgc 1981 cgcttgcatc cacgatgttg atcatcccgg cttaaccaat cagttcttgg ttaactcaag 2041 ttccgaacta gcattaatgt acaatgacga atctgttttg gaaaatcatc atttagctgt 2101 tgcctttaaa ttattgcaaa atcaaggatg tgatatattc tgtaatatgc aaaagaaaca 2161 acgccaaaca ttgaggaaaa tggttattga tattgtgctg tccacggaca tgtccaagca 2221 catgagtctg ctggccgacc tgaagacaat ggtggaaacc aagaaggtgg ccggctccgg 2281 agtcctgctg ctggacaact acaccgatcg catacaggtg ctcgagaatc tggtgcactg 2341 cgccgatctg agcaatccca ccaagccgct gccgctttac aagcgctggg tggccctgct 2401 catggaggag ttcttcctgc agggcgacaa ggagcgcgag tcgggcatgg acatcagtcc 2461 catgtgcgat cgccacaacg ccaccatcga gaagtcgcag gtgggcttca tcgactatat 2521 cgtccacccg ctgtgggaga cctgggcgga cctggtgcac ccggacgccc aggacatact 2581 cgacacgctt gaagagaaca gagactacta ccagagcatg ataccgccct cgccgccgcc 2641 gtcgggggtc gatgagaatc cgcaggagga caggatacgc tttcaagtaa ccctggagga 2701 gtccgaccag gagaacctcg ccgagctgga ggagggcgac gagagtggcg gcgagagcac 2761 caccaccgga acaaccggaa ccaccgccgc ctccgcgctg ggcggggctg ggggcggtgg 2821 cggtgctggc gggggcgtgg cacccaggac gggtggctgc caaaaccaac cgcagcacgg 2881 tggaatgtga cggagagtcg tgggaattta tcgcaaaata caggaaaagg ctcacaactt 2941 tttcctatta cgttagtgac tactattaac acacaaaaac caaacaaaaa ccaaaaacga 3001 aaaactcaaa aaaaaacaaa gaaaaactct tggaaaaatg caaaaaaaaa atacaaaaaa 3061 aaaccaaaaa gccaactaaa gaaatattaa acaaatgttt aaagcataca aagaatccaa 3121 aacagcaata gcaaaagtac cgtttaactt ataaagccta gagaaaaacg aaaaaggaaa 3181 ttagaaattt acttaatgga acaccgagat tgatgttgaa aatacactga aaaaaagaga 3241 tcacgaggag atgagctaac taagagaaat cttacatatt gttaaacgta cacacacaca 3301 ctaaatccaa gacaaagcaa agataatgag aaaccccatt gataagtaat actaagaaga 3361 taccaaaact accgccccct tcccccaatt atatagacga tttttgttgc atgtgtaggc 3421 aaatgatttt tgttaaattc atctgaagtg ggacatcaat cggagaaaaa ccccctgagc 3481 cccctaacca agtctcctct tttaaaccat tgactaaagt gaaatattta aaaacaagaa 3541 aaacaaccga acggaaggaa taattaatac gacttagctt aagagaagtt tttaagtttt 3601 gaatgttttg catgcccgaa cagattcatt ttactcgatt gataacgtta gatctaactt 3661 tagaccgatt aacgctaacg gcaacacaca tatggaattt tttatgattt agaccccagc 3721 gatagaagcg aaaacaaaaa gaaaaacaaa aactaaaacc aaccatgtta agtgtaagaa 3781 cccagtgaat taaaccaaaa ttgaaagcca cccgagttaa gaccatttaa ttcaaatcta 3841 aatccaaatc ccgaacccca aacaacaaag aagaacagtc tacagccaga ctgtagttgt 3901 atagtaatat atatgatata aatatttttt tttaatatta tttgtaaata atttaaatgt 3961 tggactcgaa tttaaatcaa gcggctagca aatgttgcag ccaaactaaa actaaaatga 4021 aaacaaagcc aaaaacacat aaataacata aataaggaag taagtggaga gaaaaaaagg 4081 aaggtggaaa agaaaggaaa aactattgta caattagcta aagaatttcc atttcaattt 4141 tcgattttcg atttgaattg caatttgatt tgcttccaga aaacaagaga aagagaaaga 4201 tgataaagat atagaaaagg aaaggagaag agatgagaag aaaagaaatt agagagagat 4261 aaaccgaaaa taatgtcaaa cgctgtcttc gcaaatattt ttcgctatat atttacttat 4321 atcattattt actagttact aagctactta ctgagccaca caatttaaaa acgaaagaga 4381 caagacaccc ggtcgagaaa gagagggagc atcgatgaat ttagtgaaca aacattaaac 4441 ttactggcag aaagcacaca atttacaaac cacaaagcaa accaccagaa aagactcttc 4501 aagcacaagc aatttttagt tttccaaatg aaaaatgaaa aaccaaagca aagcaaaacc 4561 aacacacaaa ggaaaagcaa aacaagaaaa aacaaaaaac a