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LOCUS XM_070218256 4659 bp mRNA linear INV 09-DEC-2024 transcript variant X13, mRNA. ACCESSION XM_070218256 VERSION XM_070218256.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4659 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4659 /gene="dnc" /note="phosphodiesterase dunce; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins" /db_xref="GeneID:108059389" CDS 1017..2948 /gene="dnc" /codon_start=1 /product="3',5'-cyclic-AMP phosphodiesterase isoform X11" /protein_id="XP_070074357.1" /db_xref="GeneID:108059389" /translation="MSPKSMSRNSSIASERFKEQEASILVDRSHGEDLIVTPFAQILA SLRSVRNNLLSLTNVPASNKSRRPNQSSSASRSGNPSGAPLSQGEEAYTRLATDTIEE LDWCLDQLETIQTHRSVSDMASLKFKRMLNKELSHFSESSRSGNQISEYICSTFLDKQ QEFDLPSLRVEDNPELVAANAAASGQQSAGQYARSRSPRGPPMSQISGVKRPLSHTNS FTGERLPTFGVETPRENELGTLLGELDTWGIQIFSIGEFSVNRPLTSVAYTIFQSREL LTSLMIPPKTFLNFMTTLEDHYVKDNPFHNSLHAADVTQSTNVLLNTPALEGVFTPLE VGGALFAACIHDVDHPGLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLLQNQGCD IFCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAGSGVLLLDNYTD RIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESGMDISPMCDRHNA TIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSMIPPSPPPSGVDE NPQEDRIRFQVTLEESDQENLAELEEGDESGGESTTTGTTGTTAASALGGAGGGGGAG GGVAPRTGGCQNQPQHGGM" misc_feature 1122..1490 /gene="dnc" /note="Phosphodiesterase 4 upstream conserved regions (UCR); Region: PDE4_UCR; pfam18100" /db_xref="CDD:465648" misc_feature 1926..2648 /gene="dnc" /note="3'5'-cyclic nucleotide phosphodiesterase; Region: PDEase_I; pfam00233" /db_xref="CDD:459723" polyA_site 4659 /gene="dnc" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaaaattatt gttcatacgc aaagtgttgt gcggtcgcat cgcatcgcat atcgcatatc 61 gtgtgtgtgt gcgtgtgggt gcgtgtgtgt gtgcgcgcgc gccgcctaaa aataataata 121 aaaataaaaa acaaaacgaa aaaaacaaat cacaataata gtaaacaatg gatacgcgta 181 aaaatcgtaa atgctaaata ttcggtaaat aaaacagcat tgcccgtgta ttttttgttc 241 ttgtttaacc ttttttttca agtgctcctc gcacgtgtgt gcaaaacaac aacaaaacaa 301 cgcaaggggg agagcaaaga gaagctgtaa attacataaa agaagcagca gaaataaaga 361 taacagagtg gaatgataag cggcaagcag aaaaaagcca caaagggaaa atacatcaaa 421 aatattgcca gccgtaatta cagaaaattg cggaaaatag aaatattgta tattccaaaa 481 gtcgtttaaa agttagtgcg aaataaacaa aacaaaaatc aaacaaaggg cggcatccga 541 ataaaagcaa aaagcgtgct aacaaagcac aataaaacaa agcatattaa agccaagaaa 601 atcgccaaag ttgcaacaga aaaaatacta ccaaacatgc tacaataaaa acccctcagt 661 gaaaatacaa taaatcaaaa tactccattt aaaaccaata ttactaatta ataactagcg 721 aacaatagaa acaaagacaa tagcagagcc acaactaaaa atctaaaaac ctaaatgtag 781 acaaatatac aatgagcgaa aacccaaaca aagaaagtcc agtagtgaaa atagaccagt 841 aatcaaaaca agcttttgaa aacaagaaag ataaccgtaa ttgcgatttc gatgtagaaa 901 atggccaggg cgctcgatca ccgctcgagg gcggctctcc cagcgccggt ttggttctac 961 agaatttgcc gcagcgtcgc gaatcgtttc tatatcgctc cgattccgac tttgagatgt 1021 cgcccaagtc catgtctcga aactcaagca tcgctagcga aaggtttaaa gaacaggaag 1081 cctctatact cgttgaccga tcccatggcg aggatctcat tgtgacgcct ttcgcccaaa 1141 ttttagccag cttacgttca gtgcgcaaca atttattaag tctgacaaat gttccagcat 1201 caaacaaatc caggcggccc aaccaatcct cgtcggcctc ccgatcggga aatccctcgg 1261 gagccccgct gtcccagggc gaggaggcct acacccgcct ggccaccgac accatcgagg 1321 agctggactg gtgcctcgac cagctggaga ccatccagac ccatcgcagc gtctccgaca 1381 tggcttcgct caagttcaaa cgcatgctca acaaggagct gtcacacttc agcgagtcca 1441 gcagatcggg aaatcagatt tccgagtaca tttgttccac atttttggac aagcagcagg 1501 agttcgactt gccgtcgctg cgcgtggagg ataatccgga gctggtggcc gccaatgccg 1561 ccgccagcgg ccagcagtcc gctggccagt acgcccgctc ccgctccccc cgcggcccgc 1621 ccatgtcgca gatcagcggc gtgaagcggc ccctttcgca caccaacagc ttcaccggcg 1681 aacggctgcc caccttcggc gtggagacgc ccagggagaa cgagctgggc accctgctcg 1741 gcgaactgga cacctggggc atccagatat tcagcatcgg cgagttcagc gtcaaccgac 1801 cgctcaccag tgtggcatac accatatttc agagtagaga attactgacc agtcttatga 1861 taccaccgaa aacttttctt aactttatga ctactctgga ggaccactac gtcaaagaca 1921 atccgtttca caattcgctg catgccgccg acgtgaccca gagcaccaat gtgctactca 1981 atacaccggc gctggagggc gtattcacac cgctcgaggt gggcggggca ctgttcgccg 2041 cttgcatcca cgatgttgat catcccggct taaccaatca gttcttggtt aactcaagtt 2101 ccgaactagc attaatgtac aatgacgaat ctgttttgga aaatcatcat ttagctgttg 2161 cctttaaatt attgcaaaat caaggatgtg atatattctg taatatgcaa aagaaacaac 2221 gccaaacatt gaggaaaatg gttattgata ttgtgctgtc cacggacatg tccaagcaca 2281 tgagtctgct ggccgacctg aagacaatgg tggaaaccaa gaaggtggcc ggctccggag 2341 tcctgctgct ggacaactac accgatcgca tacaggtgct cgagaatctg gtgcactgcg 2401 ccgatctgag caatcccacc aagccgctgc cgctttacaa gcgctgggtg gccctgctca 2461 tggaggagtt cttcctgcag ggcgacaagg agcgcgagtc gggcatggac atcagtccca 2521 tgtgcgatcg ccacaacgcc accatcgaga agtcgcaggt gggcttcatc gactatatcg 2581 tccacccgct gtgggagacc tgggcggacc tggtgcaccc ggacgcccag gacatactcg 2641 acacgcttga agagaacaga gactactacc agagcatgat accgccctcg ccgccgccgt 2701 cgggggtcga tgagaatccg caggaggaca ggatacgctt tcaagtaacc ctggaggagt 2761 ccgaccagga gaacctcgcc gagctggagg agggcgacga gagtggcggc gagagcacca 2821 ccaccggaac aaccggaacc accgccgcct ccgcgctggg cggggctggg ggcggtggcg 2881 gtgctggcgg gggcgtggca cccaggacgg gtggctgcca aaaccaaccg cagcacggtg 2941 gaatgtgacg gagagtcgtg ggaatttatc gcaaaataca ggaaaaggct cacaactttt 3001 tcctattacg ttagtgacta ctattaacac acaaaaacca aacaaaaacc aaaaacgaaa 3061 aactcaaaaa aaaacaaaga aaaactcttg gaaaaatgca aaaaaaaaat acaaaaaaaa 3121 accaaaaagc caactaaaga aatattaaac aaatgtttaa agcatacaaa gaatccaaaa 3181 cagcaatagc aaaagtaccg tttaacttat aaagcctaga gaaaaacgaa aaaggaaatt 3241 agaaatttac ttaatggaac accgagattg atgttgaaaa tacactgaaa aaaagagatc 3301 acgaggagat gagctaacta agagaaatct tacatattgt taaacgtaca cacacacact 3361 aaatccaaga caaagcaaag ataatgagaa accccattga taagtaatac taagaagata 3421 ccaaaactac cgcccccttc ccccaattat atagacgatt tttgttgcat gtgtaggcaa 3481 atgatttttg ttaaattcat ctgaagtggg acatcaatcg gagaaaaacc ccctgagccc 3541 cctaaccaag tctcctcttt taaaccattg actaaagtga aatatttaaa aacaagaaaa 3601 acaaccgaac ggaaggaata attaatacga cttagcttaa gagaagtttt taagttttga 3661 atgttttgca tgcccgaaca gattcatttt actcgattga taacgttaga tctaacttta 3721 gaccgattaa cgctaacggc aacacacata tggaattttt tatgatttag accccagcga 3781 tagaagcgaa aacaaaaaga aaaacaaaaa ctaaaaccaa ccatgttaag tgtaagaacc 3841 cagtgaatta aaccaaaatt gaaagccacc cgagttaaga ccatttaatt caaatctaaa 3901 tccaaatccc gaaccccaaa caacaaagaa gaacagtcta cagccagact gtagttgtat 3961 agtaatatat atgatataaa tatttttttt taatattatt tgtaaataat ttaaatgttg 4021 gactcgaatt taaatcaagc ggctagcaaa tgttgcagcc aaactaaaac taaaatgaaa 4081 acaaagccaa aaacacataa ataacataaa taaggaagta agtggagaga aaaaaaggaa 4141 ggtggaaaag aaaggaaaaa ctattgtaca attagctaaa gaatttccat ttcaattttc 4201 gattttcgat ttgaattgca atttgatttg cttccagaaa acaagagaaa gagaaagatg 4261 ataaagatat agaaaaggaa aggagaagag atgagaagaa aagaaattag agagagataa 4321 accgaaaata atgtcaaacg ctgtcttcgc aaatattttt cgctatatat ttacttatat 4381 cattatttac tagttactaa gctacttact gagccacaca atttaaaaac gaaagagaca 4441 agacacccgg tcgagaaaga gagggagcat cgatgaattt agtgaacaaa cattaaactt 4501 actggcagaa agcacacaat ttacaaacca caaagcaaac caccagaaaa gactcttcaa 4561 gcacaagcaa tttttagttt tccaaatgaa aaatgaaaaa ccaaagcaaa gcaaaaccaa 4621 cacacaaagg aaaagcaaaa caagaaaaaa caaaaaaca