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LOCUS XM_070218254 5045 bp mRNA linear INV 09-DEC-2024 transcript variant X9, mRNA. ACCESSION XM_070218254 VERSION XM_070218254.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5045 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5045 /gene="dnc" /note="phosphodiesterase dunce; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins" /db_xref="GeneID:108059389" CDS 362..3334 /gene="dnc" /codon_start=1 /product="3',5'-cyclic-AMP phosphodiesterase, isoforms N/G isoform X7" /protein_id="XP_070074355.1" /db_xref="GeneID:108059389" /translation="MIATLFIIFAFIRAFPWSRKRGRPALALTLVPDDQDRDRDQKGE NNNRPRPSISLGQGEGMAPRTRRKSSKFHEVTFSGSVGGGESDGGGEVTNGGPSSLEI SPNKRHSLSTTSNSSSAPYRYLSGSSRSRGSRGDCHEYYQLQQQSTSSLSNGGGNRRA LSQRSDTMATEAEGEEFEVDPMDEDDEEDETYDRETEEFYSNIQDATGTGGSSQSRSK RSSLFSRSDSSATTTSSSGGGSGTFTGGKRRSAASILSSSMCSDLMTSDRRSSTATEY SVRSVTTGNAGGNTQRRSSGRIRRYVSRMTIAGARRRTTGSFDVENGQGARSPLEGGS PSAGLVLQNLPQRRESFLYRSDSDFEMSPKSMSRNSSIASESHGEDLIVTPFAQILAS LRSVRNNLLSLTNVPASNKSRRPNQSSSASRSGNPSGAPLSQGEEAYTRLATDTIEEL DWCLDQLETIQTHRSVSDMASLKFKRMLNKELSHFSESSRSGNQISEYICSTFLDKQQ EFDLPSLRVEDNPELVAANAAASGQQSAGQYARSRSPRGPPMSQISGVKRPLSHTNSF TGERLPTFGVETPRENELGTLLGELDTWGIQIFSIGEFSVNRPLTSVAYTIFQSRELL TSLMIPPKTFLNFMTTLEDHYVKDNPFHNSLHAADVTQSTNVLLNTPALEGVFTPLEV GGALFAACIHDVDHPGLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLLQNQGCDI FCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAGSGVLLLDNYTDR IQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESGMDISPMCDRHNAT IEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSMIPPSPPPSGVDEN PQEDRIRFQVTLEESDQENLAELEEGDESGGESTTTGTTGTTAASALGGAGGGGGAGG GVAPRTGGCQNQPQHGGM" misc_feature 1508..1876 /gene="dnc" /note="Phosphodiesterase 4 upstream conserved regions (UCR); Region: PDE4_UCR; pfam18100" /db_xref="CDD:465648" misc_feature 2312..3034 /gene="dnc" /note="3'5'-cyclic nucleotide phosphodiesterase; Region: PDEase_I; pfam00233" /db_xref="CDD:459723" polyA_site 5045 /gene="dnc" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgcgcacaca caatttgcgt tcgaaaatat tccgcaaaaa cgcaaatcgc gaaattcgtg 61 aacaattcgc aaaacgaaaa cgcctaaaaa tcggcccaaa atcgcgcatt attctggcaa 121 aaggcaaaca aaataaaacg gcaaaatcga acaaaccaca ccgaaatacc gaaattgaac 181 taattaaaat gacgagcctg tagtagtagt agtgcaaaac aataaaatcg acattaagtg 241 aaaaacgaaa atagaaagaa aaaccttaaa acgacgaagg ataaaaaaaa tgccaaagga 301 tgtgcttgca attttctagg ggcagcgagt aaagagaaaa ggagattaag ggtgtgccaa 361 gatgatagcc acgctgttca tcatctttgc attcatacgg gcctttccct ggagcagaaa 421 gcgaggtcgc cccgccttgg ccttgacctt ggtaccagac gatcaagatc gcgatcggga 481 tcaaaagggt gagaacaaca atcggccgag accctcgatt tcgctgggac agggcgaggg 541 aatggcgccg cgcactcgtc gcaaatcctc caaattccac gaggtcacct tcagcggcag 601 cgtgggcggc ggcgaaagcg atggcggtgg cgaggtcacc aacggcggtc cttccagcct 661 cgaaataagt cccaacaaac ggcactcgct gagcaccacc agcaactcca gttcggcacc 721 ctatcgctat ctcagcggga gcagcagatc ccggggctcc cgaggcgatt gccacgagta 781 ctaccaactg caacagcaat cgacatcctc gctatcgaat ggcggaggga atcggcgggc 841 actcagccag cgcagcgata cgatggccac cgaggcggag ggcgaggagt tcgaggtgga 901 tcccatggac gaggacgacg aggaggacga gacttatgac agggagacgg aagagttcta 961 cagcaatatc caggatgcca cgggcaccgg tggctcgtcg cagagtcgca gcaagagatc 1021 ctcgctcttc tccagatcgg atagctccgc cactaccaca tcctcgagcg gcggcggcag 1081 tggaaccttc accggcggca agcggagatc cgccgcctcc attctgtcct catcgatgtg 1141 ctccgacctg atgaccagcg atcggcggag ctccacggcc accgagtaca gtgtgaggtc 1201 ggtgaccacc ggcaatgctg gcggaaatac gcagcgcagg tcgagcggac ggattcggag 1261 atatgtgtca cggatgacga tcgccggagc gagaagacgc acaacgggca gtttcgatgt 1321 agaaaatggc cagggcgctc gatcaccgct cgagggcggc tctcccagcg ccggtttggt 1381 tctacagaat ttgccgcagc gtcgcgaatc gtttctatat cgctccgatt ccgactttga 1441 gatgtcgccc aagtccatgt ctcgaaactc aagcatcgct agcgaaagcc atggcgagga 1501 tctcattgtg acgcctttcg cccaaatttt agccagctta cgttcagtgc gcaacaattt 1561 attaagtctg acaaatgttc cagcatcaaa caaatccagg cggcccaacc aatcctcgtc 1621 ggcctcccga tcgggaaatc cctcgggagc cccgctgtcc cagggcgagg aggcctacac 1681 ccgcctggcc accgacacca tcgaggagct ggactggtgc ctcgaccagc tggagaccat 1741 ccagacccat cgcagcgtct ccgacatggc ttcgctcaag ttcaaacgca tgctcaacaa 1801 ggagctgtca cacttcagcg agtccagcag atcgggaaat cagatttccg agtacatttg 1861 ttccacattt ttggacaagc agcaggagtt cgacttgccg tcgctgcgcg tggaggataa 1921 tccggagctg gtggccgcca atgccgccgc cagcggccag cagtccgctg gccagtacgc 1981 ccgctcccgc tccccccgcg gcccgcccat gtcgcagatc agcggcgtga agcggcccct 2041 ttcgcacacc aacagcttca ccggcgaacg gctgcccacc ttcggcgtgg agacgcccag 2101 ggagaacgag ctgggcaccc tgctcggcga actggacacc tggggcatcc agatattcag 2161 catcggcgag ttcagcgtca accgaccgct caccagtgtg gcatacacca tatttcagag 2221 tagagaatta ctgaccagtc ttatgatacc accgaaaact tttcttaact ttatgactac 2281 tctggaggac cactacgtca aagacaatcc gtttcacaat tcgctgcatg ccgccgacgt 2341 gacccagagc accaatgtgc tactcaatac accggcgctg gagggcgtat tcacaccgct 2401 cgaggtgggc ggggcactgt tcgccgcttg catccacgat gttgatcatc ccggcttaac 2461 caatcagttc ttggttaact caagttccga actagcatta atgtacaatg acgaatctgt 2521 tttggaaaat catcatttag ctgttgcctt taaattattg caaaatcaag gatgtgatat 2581 attctgtaat atgcaaaaga aacaacgcca aacattgagg aaaatggtta ttgatattgt 2641 gctgtccacg gacatgtcca agcacatgag tctgctggcc gacctgaaga caatggtgga 2701 aaccaagaag gtggccggct ccggagtcct gctgctggac aactacaccg atcgcataca 2761 ggtgctcgag aatctggtgc actgcgccga tctgagcaat cccaccaagc cgctgccgct 2821 ttacaagcgc tgggtggccc tgctcatgga ggagttcttc ctgcagggcg acaaggagcg 2881 cgagtcgggc atggacatca gtcccatgtg cgatcgccac aacgccacca tcgagaagtc 2941 gcaggtgggc ttcatcgact atatcgtcca cccgctgtgg gagacctggg cggacctggt 3001 gcacccggac gcccaggaca tactcgacac gcttgaagag aacagagact actaccagag 3061 catgataccg ccctcgccgc cgccgtcggg ggtcgatgag aatccgcagg aggacaggat 3121 acgctttcaa gtaaccctgg aggagtccga ccaggagaac ctcgccgagc tggaggaggg 3181 cgacgagagt ggcggcgaga gcaccaccac cggaacaacc ggaaccaccg ccgcctccgc 3241 gctgggcggg gctgggggcg gtggcggtgc tggcgggggc gtggcaccca ggacgggtgg 3301 ctgccaaaac caaccgcagc acggtggaat gtgacggaga gtcgtgggaa tttatcgcaa 3361 aatacaggaa aaggctcaca actttttcct attacgttag tgactactat taacacacaa 3421 aaaccaaaca aaaaccaaaa acgaaaaact caaaaaaaaa caaagaaaaa ctcttggaaa 3481 aatgcaaaaa aaaaatacaa aaaaaaacca aaaagccaac taaagaaata ttaaacaaat 3541 gtttaaagca tacaaagaat ccaaaacagc aatagcaaaa gtaccgttta acttataaag 3601 cctagagaaa aacgaaaaag gaaattagaa atttacttaa tggaacaccg agattgatgt 3661 tgaaaataca ctgaaaaaaa gagatcacga ggagatgagc taactaagag aaatcttaca 3721 tattgttaaa cgtacacaca cacactaaat ccaagacaaa gcaaagataa tgagaaaccc 3781 cattgataag taatactaag aagataccaa aactaccgcc cccttccccc aattatatag 3841 acgatttttg ttgcatgtgt aggcaaatga tttttgttaa attcatctga agtgggacat 3901 caatcggaga aaaaccccct gagcccccta accaagtctc ctcttttaaa ccattgacta 3961 aagtgaaata tttaaaaaca agaaaaacaa ccgaacggaa ggaataatta atacgactta 4021 gcttaagaga agtttttaag ttttgaatgt tttgcatgcc cgaacagatt cattttactc 4081 gattgataac gttagatcta actttagacc gattaacgct aacggcaaca cacatatgga 4141 attttttatg atttagaccc cagcgataga agcgaaaaca aaaagaaaaa caaaaactaa 4201 aaccaaccat gttaagtgta agaacccagt gaattaaacc aaaattgaaa gccacccgag 4261 ttaagaccat ttaattcaaa tctaaatcca aatcccgaac cccaaacaac aaagaagaac 4321 agtctacagc cagactgtag ttgtatagta atatatatga tataaatatt tttttttaat 4381 attatttgta aataatttaa atgttggact cgaatttaaa tcaagcggct agcaaatgtt 4441 gcagccaaac taaaactaaa atgaaaacaa agccaaaaac acataaataa cataaataag 4501 gaagtaagtg gagagaaaaa aaggaaggtg gaaaagaaag gaaaaactat tgtacaatta 4561 gctaaagaat ttccatttca attttcgatt ttcgatttga attgcaattt gatttgcttc 4621 cagaaaacaa gagaaagaga aagatgataa agatatagaa aaggaaagga gaagagatga 4681 gaagaaaaga aattagagag agataaaccg aaaataatgt caaacgctgt cttcgcaaat 4741 atttttcgct atatatttac ttatatcatt atttactagt tactaagcta cttactgagc 4801 cacacaattt aaaaacgaaa gagacaagac acccggtcga gaaagagagg gagcatcgat 4861 gaatttagtg aacaaacatt aaacttactg gcagaaagca cacaatttac aaaccacaaa 4921 gcaaaccacc agaaaagact cttcaagcac aagcaatttt tagttttcca aatgaaaaat 4981 gaaaaaccaa agcaaagcaa aaccaacaca caaaggaaaa gcaaaacaag aaaaaacaaa 5041 aaaca