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LOCUS XM_070218253 5084 bp mRNA linear INV 09-DEC-2024 transcript variant X7, mRNA. ACCESSION XM_070218253 VERSION XM_070218253.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5084 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5084 /gene="dnc" /note="phosphodiesterase dunce; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins" /db_xref="GeneID:108059389" CDS 362..3373 /gene="dnc" /codon_start=1 /product="3',5'-cyclic-AMP phosphodiesterase, isoforms N/G isoform X6" /protein_id="XP_070074354.1" /db_xref="GeneID:108059389" /translation="MIATLFIIFAFIRAFPWSRKRGRPALALTLVPDDQDRDRDQKGE NNNRPRPSISLGQGEGMAPRTRRKSSKFHEVTFSGSVGGGESDGGGEVTNGGPSSLEI SPNKRHSLSTTSNSSSAPYRYLSGSSRSRGSRGDCHEYYQLQQQSTSSLSNGGGNRRA LSQRSDTMATEAEGEEFEVDPMDEDDEEDETYDRETEEFYSNIQDATGTGGSSQSRSK RSSLFSRSDSSATTTSSSGGGSGTFTGGKRRSAASILSSSMCSDLMTSDRRSSTATEY SVRSVTTGNAGGNTQRRSSGRIRRYVSRMTIAGARRRTTGSFDVENGQGARSPLEGGS PSAGLVLQNLPQRRESFLYRSDSDFEMSPKSMSRNSSIASERFKEQEASILVDRSHGE DLIVTPFAQILASLRSVRNNLLSLTNVPASNKSRRPNQSSSASRSGNPSGAPLSQGEE AYTRLATDTIEELDWCLDQLETIQTHRSVSDMASLKFKRMLNKELSHFSESSRSGNQI SEYICSTFLDKQQEFDLPSLRVEDNPELVAANAAASGQQSAGQYARSRSPRGPPMSQI SGVKRPLSHTNSFTGERLPTFGVETPRENELGTLLGELDTWGIQIFSIGEFSVNRPLT SVAYTIFQSRELLTSLMIPPKTFLNFMTTLEDHYVKDNPFHNSLHAADVTQSTNVLLN TPALEGVFTPLEVGGALFAACIHDVDHPGLTNQFLVNSSSELALMYNDESVLENHHLA VAFKLLQNQGCDIFCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVA GSGVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESG MDISPMCDRHNATIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSM IPPSPPPSGVDENPQEDRIRFQVTLEESDQENLAELEEGDESGGESTTTGTTGTTAAS ALGGAGGGGGAGGGVAPRTGGCQNQPQHGGM" misc_feature 1547..1915 /gene="dnc" /note="Phosphodiesterase 4 upstream conserved regions (UCR); Region: PDE4_UCR; pfam18100" /db_xref="CDD:465648" misc_feature 2351..3073 /gene="dnc" /note="3'5'-cyclic nucleotide phosphodiesterase; Region: PDEase_I; pfam00233" /db_xref="CDD:459723" polyA_site 5084 /gene="dnc" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgcgcacaca caatttgcgt tcgaaaatat tccgcaaaaa cgcaaatcgc gaaattcgtg 61 aacaattcgc aaaacgaaaa cgcctaaaaa tcggcccaaa atcgcgcatt attctggcaa 121 aaggcaaaca aaataaaacg gcaaaatcga acaaaccaca ccgaaatacc gaaattgaac 181 taattaaaat gacgagcctg tagtagtagt agtgcaaaac aataaaatcg acattaagtg 241 aaaaacgaaa atagaaagaa aaaccttaaa acgacgaagg ataaaaaaaa tgccaaagga 301 tgtgcttgca attttctagg ggcagcgagt aaagagaaaa ggagattaag ggtgtgccaa 361 gatgatagcc acgctgttca tcatctttgc attcatacgg gcctttccct ggagcagaaa 421 gcgaggtcgc cccgccttgg ccttgacctt ggtaccagac gatcaagatc gcgatcggga 481 tcaaaagggt gagaacaaca atcggccgag accctcgatt tcgctgggac agggcgaggg 541 aatggcgccg cgcactcgtc gcaaatcctc caaattccac gaggtcacct tcagcggcag 601 cgtgggcggc ggcgaaagcg atggcggtgg cgaggtcacc aacggcggtc cttccagcct 661 cgaaataagt cccaacaaac ggcactcgct gagcaccacc agcaactcca gttcggcacc 721 ctatcgctat ctcagcggga gcagcagatc ccggggctcc cgaggcgatt gccacgagta 781 ctaccaactg caacagcaat cgacatcctc gctatcgaat ggcggaggga atcggcgggc 841 actcagccag cgcagcgata cgatggccac cgaggcggag ggcgaggagt tcgaggtgga 901 tcccatggac gaggacgacg aggaggacga gacttatgac agggagacgg aagagttcta 961 cagcaatatc caggatgcca cgggcaccgg tggctcgtcg cagagtcgca gcaagagatc 1021 ctcgctcttc tccagatcgg atagctccgc cactaccaca tcctcgagcg gcggcggcag 1081 tggaaccttc accggcggca agcggagatc cgccgcctcc attctgtcct catcgatgtg 1141 ctccgacctg atgaccagcg atcggcggag ctccacggcc accgagtaca gtgtgaggtc 1201 ggtgaccacc ggcaatgctg gcggaaatac gcagcgcagg tcgagcggac ggattcggag 1261 atatgtgtca cggatgacga tcgccggagc gagaagacgc acaacgggca gtttcgatgt 1321 agaaaatggc cagggcgctc gatcaccgct cgagggcggc tctcccagcg ccggtttggt 1381 tctacagaat ttgccgcagc gtcgcgaatc gtttctatat cgctccgatt ccgactttga 1441 gatgtcgccc aagtccatgt ctcgaaactc aagcatcgct agcgaaaggt ttaaagaaca 1501 ggaagcctct atactcgttg accgatccca tggcgaggat ctcattgtga cgcctttcgc 1561 ccaaatttta gccagcttac gttcagtgcg caacaattta ttaagtctga caaatgttcc 1621 agcatcaaac aaatccaggc ggcccaacca atcctcgtcg gcctcccgat cgggaaatcc 1681 ctcgggagcc ccgctgtccc agggcgagga ggcctacacc cgcctggcca ccgacaccat 1741 cgaggagctg gactggtgcc tcgaccagct ggagaccatc cagacccatc gcagcgtctc 1801 cgacatggct tcgctcaagt tcaaacgcat gctcaacaag gagctgtcac acttcagcga 1861 gtccagcaga tcgggaaatc agatttccga gtacatttgt tccacatttt tggacaagca 1921 gcaggagttc gacttgccgt cgctgcgcgt ggaggataat ccggagctgg tggccgccaa 1981 tgccgccgcc agcggccagc agtccgctgg ccagtacgcc cgctcccgct ccccccgcgg 2041 cccgcccatg tcgcagatca gcggcgtgaa gcggcccctt tcgcacacca acagcttcac 2101 cggcgaacgg ctgcccacct tcggcgtgga gacgcccagg gagaacgagc tgggcaccct 2161 gctcggcgaa ctggacacct ggggcatcca gatattcagc atcggcgagt tcagcgtcaa 2221 ccgaccgctc accagtgtgg catacaccat atttcagagt agagaattac tgaccagtct 2281 tatgatacca ccgaaaactt ttcttaactt tatgactact ctggaggacc actacgtcaa 2341 agacaatccg tttcacaatt cgctgcatgc cgccgacgtg acccagagca ccaatgtgct 2401 actcaataca ccggcgctgg agggcgtatt cacaccgctc gaggtgggcg gggcactgtt 2461 cgccgcttgc atccacgatg ttgatcatcc cggcttaacc aatcagttct tggttaactc 2521 aagttccgaa ctagcattaa tgtacaatga cgaatctgtt ttggaaaatc atcatttagc 2581 tgttgccttt aaattattgc aaaatcaagg atgtgatata ttctgtaata tgcaaaagaa 2641 acaacgccaa acattgagga aaatggttat tgatattgtg ctgtccacgg acatgtccaa 2701 gcacatgagt ctgctggccg acctgaagac aatggtggaa accaagaagg tggccggctc 2761 cggagtcctg ctgctggaca actacaccga tcgcatacag gtgctcgaga atctggtgca 2821 ctgcgccgat ctgagcaatc ccaccaagcc gctgccgctt tacaagcgct gggtggccct 2881 gctcatggag gagttcttcc tgcagggcga caaggagcgc gagtcgggca tggacatcag 2941 tcccatgtgc gatcgccaca acgccaccat cgagaagtcg caggtgggct tcatcgacta 3001 tatcgtccac ccgctgtggg agacctgggc ggacctggtg cacccggacg cccaggacat 3061 actcgacacg cttgaagaga acagagacta ctaccagagc atgataccgc cctcgccgcc 3121 gccgtcgggg gtcgatgaga atccgcagga ggacaggata cgctttcaag taaccctgga 3181 ggagtccgac caggagaacc tcgccgagct ggaggagggc gacgagagtg gcggcgagag 3241 caccaccacc ggaacaaccg gaaccaccgc cgcctccgcg ctgggcgggg ctgggggcgg 3301 tggcggtgct ggcgggggcg tggcacccag gacgggtggc tgccaaaacc aaccgcagca 3361 cggtggaatg tgacggagag tcgtgggaat ttatcgcaaa atacaggaaa aggctcacaa 3421 ctttttccta ttacgttagt gactactatt aacacacaaa aaccaaacaa aaaccaaaaa 3481 cgaaaaactc aaaaaaaaac aaagaaaaac tcttggaaaa atgcaaaaaa aaaatacaaa 3541 aaaaaaccaa aaagccaact aaagaaatat taaacaaatg tttaaagcat acaaagaatc 3601 caaaacagca atagcaaaag taccgtttaa cttataaagc ctagagaaaa acgaaaaagg 3661 aaattagaaa tttacttaat ggaacaccga gattgatgtt gaaaatacac tgaaaaaaag 3721 agatcacgag gagatgagct aactaagaga aatcttacat attgttaaac gtacacacac 3781 acactaaatc caagacaaag caaagataat gagaaacccc attgataagt aatactaaga 3841 agataccaaa actaccgccc ccttccccca attatataga cgatttttgt tgcatgtgta 3901 ggcaaatgat ttttgttaaa ttcatctgaa gtgggacatc aatcggagaa aaaccccctg 3961 agccccctaa ccaagtctcc tcttttaaac cattgactaa agtgaaatat ttaaaaacaa 4021 gaaaaacaac cgaacggaag gaataattaa tacgacttag cttaagagaa gtttttaagt 4081 tttgaatgtt ttgcatgccc gaacagattc attttactcg attgataacg ttagatctaa 4141 ctttagaccg attaacgcta acggcaacac acatatggaa ttttttatga tttagacccc 4201 agcgatagaa gcgaaaacaa aaagaaaaac aaaaactaaa accaaccatg ttaagtgtaa 4261 gaacccagtg aattaaacca aaattgaaag ccacccgagt taagaccatt taattcaaat 4321 ctaaatccaa atcccgaacc ccaaacaaca aagaagaaca gtctacagcc agactgtagt 4381 tgtatagtaa tatatatgat ataaatattt ttttttaata ttatttgtaa ataatttaaa 4441 tgttggactc gaatttaaat caagcggcta gcaaatgttg cagccaaact aaaactaaaa 4501 tgaaaacaaa gccaaaaaca cataaataac ataaataagg aagtaagtgg agagaaaaaa 4561 aggaaggtgg aaaagaaagg aaaaactatt gtacaattag ctaaagaatt tccatttcaa 4621 ttttcgattt tcgatttgaa ttgcaatttg atttgcttcc agaaaacaag agaaagagaa 4681 agatgataaa gatatagaaa aggaaaggag aagagatgag aagaaaagaa attagagaga 4741 gataaaccga aaataatgtc aaacgctgtc ttcgcaaata tttttcgcta tatatttact 4801 tatatcatta tttactagtt actaagctac ttactgagcc acacaattta aaaacgaaag 4861 agacaagaca cccggtcgag aaagagaggg agcatcgatg aatttagtga acaaacatta 4921 aacttactgg cagaaagcac acaatttaca aaccacaaag caaaccacca gaaaagactc 4981 ttcaagcaca agcaattttt agttttccaa atgaaaaatg aaaaaccaaa gcaaagcaaa 5041 accaacacac aaaggaaaag caaaacaaga aaaaacaaaa aaca