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LOCUS XM_070218252 5262 bp mRNA linear INV 09-DEC-2024 transcript variant X6, mRNA. ACCESSION XM_070218252 VERSION XM_070218252.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5262 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5262 /gene="dnc" /note="phosphodiesterase dunce; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins" /db_xref="GeneID:108059389" CDS 396..3551 /gene="dnc" /codon_start=1 /product="3',5'-cyclic-AMP phosphodiesterase isoform X5" /protein_id="XP_070074353.1" /db_xref="GeneID:108059389" /translation="MSQESNSGAGGAPGGGGNGAPPPQYIITTPSEVDADEVRSMGDL ELGSPQSQQAQQMQMQSQKFSSSTTKVASSTTRSFSMSSSLQQQKQEKQENSLQQSQQ KIISSSTRSQSLQSSTIVGEATTISSGATQMLTAAQAATLAQQLKAQSSTSIITSSEQ RTSTSTSSSSSTRFVASGAPSSSSGGGGGVGNSGNNSKTRFQSFLQQPEGAHGFLTAH QKHVRQFVRSTSAHSEAAAGGSSGSGRPEKCIRSASTQIDDTTVGGGGGVVDSSSGSL ADSAATGGSMQLSMSKMGLQQSSSILISKSAETIEMKSSSSSAGMRTQLTLSGGFLAP PGSRKITILSPIHAPPGLHDMLKRAQGRSPLSPRISFPGSDSDLFGFDVENGQGARSP LEGGSPSAGLVLQNLPQRRESFLYRSDSDFEMSPKSMSRNSSIASESHGEDLIVTPFA QILASLRSVRNNLLSLTNVPASNKRPNQSSSASRSGNPSGAPLSQGEEAYTRLATDTI EELDWCLDQLETIQTHRSVSDMASLKFKRMLNKELSHFSESSRSGNQISEYICSTFLD KQQEFDLPSLRVEDNPELVAANAAASGQQSAGQYARSRSPRGPPMSQISGVKRPLSHT NSFTGERLPTFGVETPRENELGTLLGELDTWGIQIFSIGEFSVNRPLTSVAYTIFQSR ELLTSLMIPPKTFLNFMTTLEDHYVKDNPFHNSLHAADVTQSTNVLLNTPALEGVFTP LEVGGALFAACIHDVDHPGLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLLQNQG CDIFCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAGSGVLLLDNY TDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESGMDISPMCDRH NATIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSMIPPSPPPSGV DENPQEDRIRFQVTLEESDQENLAELEEGDESGGESTTTGTTGTTAASALGGAGGGGG AGGGVAPRTGGCQNQPQHGGM" misc_feature 1731..2093 /gene="dnc" /note="Phosphodiesterase 4 upstream conserved regions (UCR); Region: PDE4_UCR; pfam18100" /db_xref="CDD:465648" misc_feature 2529..3251 /gene="dnc" /note="3'5'-cyclic nucleotide phosphodiesterase; Region: PDEase_I; pfam00233" /db_xref="CDD:459723" polyA_site 5262 /gene="dnc" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgccagttgc aaatcagacc tctgagcagc agcaacagca cagcggcagc agcaacatca 61 cagcggcaac agcaacatca cagcagcaac atcagcacgt gtgccccaac agcagagata 121 aatacataaa acgccgagaa attcaagaga agcggaagaa aaaagctaag gccaaaaagc 181 aattaaaaca aattgtgccg taagtcaggt cggtgggctt acagcccagt tccccggaaa 241 aaaaccaaaa aaaaaaccga aacaaaaaaa accaaaaaaa cacaaaaaaa gaaaacaaaa 301 caaaacagga aaccaccgca ggatctacag ggaaaacagg acccaccgcc ctcaaaagaa 361 acgcgaaaag ccagagaaaa atacaaaagt aagccatgtc ccaggagagt aatagtggtg 421 caggaggagc accaggagga ggaggcaatg gtgcaccacc accgcagtac ataataacca 481 cgcccagcga agtggatgcg gatgaggtgc gctccatggg cgacttggag ctgggctccc 541 cgcaatccca gcaagcccag caaatgcaga tgcagagcca gaagttctcg agctccacca 601 ccaaggtggc ctcctccacc actcgctcct tttcgatgag cagcagcctg cagcagcaga 661 agcaggagaa gcaggagaac agcctgcagc aatcgcagca gaagatcatc tccagttcga 721 cgcgcagcca gagccttcag tccagcacga ttgtgggcga ggccaccacc atttcgagtg 781 gcgccaccca gatgctcaca gccgcccagg cggccacctt ggcccagcag ctgaaggccc 841 agagctccac gtcgataatc acgagcagcg agcagcggac cagcacgagc acgagcagca 901 gcagcagcac tcgattcgtg gccagtggag caccctctag ctcctccggt ggaggcggtg 961 gcgttggtaa ctccggcaac aacagcaaga cccgcttcca gagtttcctc cagcagccgg 1021 agggagccca tggcttcctt accgcccacc agaagcatgt gcgccagttt gtgcgctcca 1081 catcggccca ctcggaggcg gccgccggtg gttcctccgg cagcggcagg ccggaaaagt 1141 gcatccgcag cgcctccacg cagatcgatg ataccaccgt tggcggcggc ggaggagtgg 1201 tggattcgtc gtcgggcagc ttggcggaca gcgccgccac cggcggatcc atgcagctgt 1261 cgatgagcaa aatgggcctc cagcagtcct cctcgatcct catctccaag tcggccgaga 1321 ccatcgagat gaagagcagc tcctcgtcgg ccggcatgcg cacccagttg accttgagtg 1381 gcggctttct cgctccgccc ggcagccgga agatcaccat cttgagcccc atccacgcgc 1441 cgcccggcct ccacgacatg ctaaaaaggg cccagggacg ctcgcccctc tcgcccagga 1501 tcagcttccc cggcagcgat tcggacctct tcggtttcga tgtagaaaat ggccagggcg 1561 ctcgatcacc gctcgagggc ggctctccca gcgccggttt ggttctacag aatttgccgc 1621 agcgtcgcga atcgtttcta tatcgctccg attccgactt tgagatgtcg cccaagtcca 1681 tgtctcgaaa ctcaagcatc gctagcgaaa gccatggcga ggatctcatt gtgacgcctt 1741 tcgcccaaat tttagccagc ttacgttcag tgcgcaacaa tttattaagt ctgacaaatg 1801 ttccagcatc aaacaagcgg cccaaccaat cctcgtcggc ctcccgatcg ggaaatccct 1861 cgggagcccc gctgtcccag ggcgaggagg cctacacccg cctggccacc gacaccatcg 1921 aggagctgga ctggtgcctc gaccagctgg agaccatcca gacccatcgc agcgtctccg 1981 acatggcttc gctcaagttc aaacgcatgc tcaacaagga gctgtcacac ttcagcgagt 2041 ccagcagatc gggaaatcag atttccgagt acatttgttc cacatttttg gacaagcagc 2101 aggagttcga cttgccgtcg ctgcgcgtgg aggataatcc ggagctggtg gccgccaatg 2161 ccgccgccag cggccagcag tccgctggcc agtacgcccg ctcccgctcc ccccgcggcc 2221 cgcccatgtc gcagatcagc ggcgtgaagc ggcccctttc gcacaccaac agcttcaccg 2281 gcgaacggct gcccaccttc ggcgtggaga cgcccaggga gaacgagctg ggcaccctgc 2341 tcggcgaact ggacacctgg ggcatccaga tattcagcat cggcgagttc agcgtcaacc 2401 gaccgctcac cagtgtggca tacaccatat ttcagagtag agaattactg accagtctta 2461 tgataccacc gaaaactttt cttaacttta tgactactct ggaggaccac tacgtcaaag 2521 acaatccgtt tcacaattcg ctgcatgccg ccgacgtgac ccagagcacc aatgtgctac 2581 tcaatacacc ggcgctggag ggcgtattca caccgctcga ggtgggcggg gcactgttcg 2641 ccgcttgcat ccacgatgtt gatcatcccg gcttaaccaa tcagttcttg gttaactcaa 2701 gttccgaact agcattaatg tacaatgacg aatctgtttt ggaaaatcat catttagctg 2761 ttgcctttaa attattgcaa aatcaaggat gtgatatatt ctgtaatatg caaaagaaac 2821 aacgccaaac attgaggaaa atggttattg atattgtgct gtccacggac atgtccaagc 2881 acatgagtct gctggccgac ctgaagacaa tggtggaaac caagaaggtg gccggctccg 2941 gagtcctgct gctggacaac tacaccgatc gcatacaggt gctcgagaat ctggtgcact 3001 gcgccgatct gagcaatccc accaagccgc tgccgcttta caagcgctgg gtggccctgc 3061 tcatggagga gttcttcctg cagggcgaca aggagcgcga gtcgggcatg gacatcagtc 3121 ccatgtgcga tcgccacaac gccaccatcg agaagtcgca ggtgggcttc atcgactata 3181 tcgtccaccc gctgtgggag acctgggcgg acctggtgca cccggacgcc caggacatac 3241 tcgacacgct tgaagagaac agagactact accagagcat gataccgccc tcgccgccgc 3301 cgtcgggggt cgatgagaat ccgcaggagg acaggatacg ctttcaagta accctggagg 3361 agtccgacca ggagaacctc gccgagctgg aggagggcga cgagagtggc ggcgagagca 3421 ccaccaccgg aacaaccgga accaccgccg cctccgcgct gggcggggct gggggcggtg 3481 gcggtgctgg cgggggcgtg gcacccagga cgggtggctg ccaaaaccaa ccgcagcacg 3541 gtggaatgtg acggagagtc gtgggaattt atcgcaaaat acaggaaaag gctcacaact 3601 ttttcctatt acgttagtga ctactattaa cacacaaaaa ccaaacaaaa accaaaaacg 3661 aaaaactcaa aaaaaaacaa agaaaaactc ttggaaaaat gcaaaaaaaa aatacaaaaa 3721 aaaaccaaaa agccaactaa agaaatatta aacaaatgtt taaagcatac aaagaatcca 3781 aaacagcaat agcaaaagta ccgtttaact tataaagcct agagaaaaac gaaaaaggaa 3841 attagaaatt tacttaatgg aacaccgaga ttgatgttga aaatacactg aaaaaaagag 3901 atcacgagga gatgagctaa ctaagagaaa tcttacatat tgttaaacgt acacacacac 3961 actaaatcca agacaaagca aagataatga gaaaccccat tgataagtaa tactaagaag 4021 ataccaaaac taccgccccc ttcccccaat tatatagacg atttttgttg catgtgtagg 4081 caaatgattt ttgttaaatt catctgaagt gggacatcaa tcggagaaaa accccctgag 4141 ccccctaacc aagtctcctc ttttaaacca ttgactaaag tgaaatattt aaaaacaaga 4201 aaaacaaccg aacggaagga ataattaata cgacttagct taagagaagt ttttaagttt 4261 tgaatgtttt gcatgcccga acagattcat tttactcgat tgataacgtt agatctaact 4321 ttagaccgat taacgctaac ggcaacacac atatggaatt ttttatgatt tagaccccag 4381 cgatagaagc gaaaacaaaa agaaaaacaa aaactaaaac caaccatgtt aagtgtaaga 4441 acccagtgaa ttaaaccaaa attgaaagcc acccgagtta agaccattta attcaaatct 4501 aaatccaaat cccgaacccc aaacaacaaa gaagaacagt ctacagccag actgtagttg 4561 tatagtaata tatatgatat aaatattttt ttttaatatt atttgtaaat aatttaaatg 4621 ttggactcga atttaaatca agcggctagc aaatgttgca gccaaactaa aactaaaatg 4681 aaaacaaagc caaaaacaca taaataacat aaataaggaa gtaagtggag agaaaaaaag 4741 gaaggtggaa aagaaaggaa aaactattgt acaattagct aaagaatttc catttcaatt 4801 ttcgattttc gatttgaatt gcaatttgat ttgcttccag aaaacaagag aaagagaaag 4861 atgataaaga tatagaaaag gaaaggagaa gagatgagaa gaaaagaaat tagagagaga 4921 taaaccgaaa ataatgtcaa acgctgtctt cgcaaatatt tttcgctata tatttactta 4981 tatcattatt tactagttac taagctactt actgagccac acaatttaaa aacgaaagag 5041 acaagacacc cggtcgagaa agagagggag catcgatgaa tttagtgaac aaacattaaa 5101 cttactggca gaaagcacac aatttacaaa ccacaaagca aaccaccaga aaagactctt 5161 caagcacaag caatttttag ttttccaaat gaaaaatgaa aaaccaaagc aaagcaaaac 5221 caacacacaa aggaaaagca aaacaagaaa aaacaaaaaa ca