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LOCUS XM_070218251 5271 bp mRNA linear INV 09-DEC-2024 transcript variant X5, mRNA. ACCESSION XM_070218251 VERSION XM_070218251.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5271 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5271 /gene="dnc" /note="phosphodiesterase dunce; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins" /db_xref="GeneID:108059389" CDS 399..3560 /gene="dnc" /codon_start=1 /product="3',5'-cyclic-AMP phosphodiesterase isoform X4" /protein_id="XP_070074352.1" /db_xref="GeneID:108059389" /translation="MSQESNSGAGGAPGGGGNGAPPPQYIITTPSEVDADEVRSMGDL ELGSPQSQQAQQMQMQSQKFSSSTTKVASSTTRSFSMSSSLQQQKQEKQENSLQQSQQ KIISSSTRSQSLQSSTIVGEATTISSGATQMLTAAQAATLAQQLKAQSSTSIITSSEQ RTSTSTSSSSSTRFVASGAPSSSSGGGGGVGNSGNNSKTRFQSFLQQPEGAHGFLTAH QKHVRQFVRSTSAHSEAAAGGSSGSGRPEKCIRSASTQIDDTTVGGGGGVVDSSSGSL ADSAATGGSMQLSMSKMGLQQSSSILISKSAETIEMKSSSSSAGMRTQLTLSGGFLAP PGSRKITILSPIHAPPGLHDMLKRAQGRSPLSPRISFPGSDSDLFGFDVENGQGARSP LEGGSPSAGLVLQNLPQRRESFLYRSDSDFEMSPKSMSRNSSIASESHGEDLIVTPFA QILASLRSVRNNLLSLTNVPASNKSRRPNQSSSASRSGNPSGAPLSQGEEAYTRLATD TIEELDWCLDQLETIQTHRSVSDMASLKFKRMLNKELSHFSESSRSGNQISEYICSTF LDKQQEFDLPSLRVEDNPELVAANAAASGQQSAGQYARSRSPRGPPMSQISGVKRPLS HTNSFTGERLPTFGVETPRENELGTLLGELDTWGIQIFSIGEFSVNRPLTSVAYTIFQ SRELLTSLMIPPKTFLNFMTTLEDHYVKDNPFHNSLHAADVTQSTNVLLNTPALEGVF TPLEVGGALFAACIHDVDHPGLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLLQN QGCDIFCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAGSGVLLLD NYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESGMDISPMCD RHNATIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSMIPPSPPPS GVDENPQEDRIRFQVTLEESDQENLAELEEGDESGGESTTTGTTGTTAASALGGAGGG GGAGGGVAPRTGGCQNQPQHGGM" misc_feature 1734..2102 /gene="dnc" /note="Phosphodiesterase 4 upstream conserved regions (UCR); Region: PDE4_UCR; pfam18100" /db_xref="CDD:465648" misc_feature 2538..3260 /gene="dnc" /note="3'5'-cyclic nucleotide phosphodiesterase; Region: PDEase_I; pfam00233" /db_xref="CDD:459723" polyA_site 5271 /gene="dnc" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agttgccagt tgcaaatcag acctctgagc agcagcaaca gcacagcggc agcagcaaca 61 tcacagcggc aacagcaaca tcacagcagc aacatcagca cgtgtgcccc aacagcagag 121 ataaatacat aaaacgccga gaaattcaag agaagcggaa gaaaaaagct aaggccaaaa 181 agcaattaaa acaaattgtg ccgtaagtca ggtcggtggg cttacagccc agttccccgg 241 aaaaaaacca aaaaaaaaac cgaaacaaaa aaaaccaaaa aaacacaaaa aaagaaaaca 301 aaacaaaaca ggaaaccacc gcaggatcta cagggaaaac aggacccacc gccctcaaaa 361 gaaacgcgaa aagccagaga aaaatacaaa agtaagccat gtcccaggag agtaatagtg 421 gtgcaggagg agcaccagga ggaggaggca atggtgcacc accaccgcag tacataataa 481 ccacgcccag cgaagtggat gcggatgagg tgcgctccat gggcgacttg gagctgggct 541 ccccgcaatc ccagcaagcc cagcaaatgc agatgcagag ccagaagttc tcgagctcca 601 ccaccaaggt ggcctcctcc accactcgct ccttttcgat gagcagcagc ctgcagcagc 661 agaagcagga gaagcaggag aacagcctgc agcaatcgca gcagaagatc atctccagtt 721 cgacgcgcag ccagagcctt cagtccagca cgattgtggg cgaggccacc accatttcga 781 gtggcgccac ccagatgctc acagccgccc aggcggccac cttggcccag cagctgaagg 841 cccagagctc cacgtcgata atcacgagca gcgagcagcg gaccagcacg agcacgagca 901 gcagcagcag cactcgattc gtggccagtg gagcaccctc tagctcctcc ggtggaggcg 961 gtggcgttgg taactccggc aacaacagca agacccgctt ccagagtttc ctccagcagc 1021 cggagggagc ccatggcttc cttaccgccc accagaagca tgtgcgccag tttgtgcgct 1081 ccacatcggc ccactcggag gcggccgccg gtggttcctc cggcagcggc aggccggaaa 1141 agtgcatccg cagcgcctcc acgcagatcg atgataccac cgttggcggc ggcggaggag 1201 tggtggattc gtcgtcgggc agcttggcgg acagcgccgc caccggcgga tccatgcagc 1261 tgtcgatgag caaaatgggc ctccagcagt cctcctcgat cctcatctcc aagtcggccg 1321 agaccatcga gatgaagagc agctcctcgt cggccggcat gcgcacccag ttgaccttga 1381 gtggcggctt tctcgctccg cccggcagcc ggaagatcac catcttgagc cccatccacg 1441 cgccgcccgg cctccacgac atgctaaaaa gggcccaggg acgctcgccc ctctcgccca 1501 ggatcagctt ccccggcagc gattcggacc tcttcggttt cgatgtagaa aatggccagg 1561 gcgctcgatc accgctcgag ggcggctctc ccagcgccgg tttggttcta cagaatttgc 1621 cgcagcgtcg cgaatcgttt ctatatcgct ccgattccga ctttgagatg tcgcccaagt 1681 ccatgtctcg aaactcaagc atcgctagcg aaagccatgg cgaggatctc attgtgacgc 1741 ctttcgccca aattttagcc agcttacgtt cagtgcgcaa caatttatta agtctgacaa 1801 atgttccagc atcaaacaaa tccaggcggc ccaaccaatc ctcgtcggcc tcccgatcgg 1861 gaaatccctc gggagccccg ctgtcccagg gcgaggaggc ctacacccgc ctggccaccg 1921 acaccatcga ggagctggac tggtgcctcg accagctgga gaccatccag acccatcgca 1981 gcgtctccga catggcttcg ctcaagttca aacgcatgct caacaaggag ctgtcacact 2041 tcagcgagtc cagcagatcg ggaaatcaga tttccgagta catttgttcc acatttttgg 2101 acaagcagca ggagttcgac ttgccgtcgc tgcgcgtgga ggataatccg gagctggtgg 2161 ccgccaatgc cgccgccagc ggccagcagt ccgctggcca gtacgcccgc tcccgctccc 2221 cccgcggccc gcccatgtcg cagatcagcg gcgtgaagcg gcccctttcg cacaccaaca 2281 gcttcaccgg cgaacggctg cccaccttcg gcgtggagac gcccagggag aacgagctgg 2341 gcaccctgct cggcgaactg gacacctggg gcatccagat attcagcatc ggcgagttca 2401 gcgtcaaccg accgctcacc agtgtggcat acaccatatt tcagagtaga gaattactga 2461 ccagtcttat gataccaccg aaaacttttc ttaactttat gactactctg gaggaccact 2521 acgtcaaaga caatccgttt cacaattcgc tgcatgccgc cgacgtgacc cagagcacca 2581 atgtgctact caatacaccg gcgctggagg gcgtattcac accgctcgag gtgggcgggg 2641 cactgttcgc cgcttgcatc cacgatgttg atcatcccgg cttaaccaat cagttcttgg 2701 ttaactcaag ttccgaacta gcattaatgt acaatgacga atctgttttg gaaaatcatc 2761 atttagctgt tgcctttaaa ttattgcaaa atcaaggatg tgatatattc tgtaatatgc 2821 aaaagaaaca acgccaaaca ttgaggaaaa tggttattga tattgtgctg tccacggaca 2881 tgtccaagca catgagtctg ctggccgacc tgaagacaat ggtggaaacc aagaaggtgg 2941 ccggctccgg agtcctgctg ctggacaact acaccgatcg catacaggtg ctcgagaatc 3001 tggtgcactg cgccgatctg agcaatccca ccaagccgct gccgctttac aagcgctggg 3061 tggccctgct catggaggag ttcttcctgc agggcgacaa ggagcgcgag tcgggcatgg 3121 acatcagtcc catgtgcgat cgccacaacg ccaccatcga gaagtcgcag gtgggcttca 3181 tcgactatat cgtccacccg ctgtgggaga cctgggcgga cctggtgcac ccggacgccc 3241 aggacatact cgacacgctt gaagagaaca gagactacta ccagagcatg ataccgccct 3301 cgccgccgcc gtcgggggtc gatgagaatc cgcaggagga caggatacgc tttcaagtaa 3361 ccctggagga gtccgaccag gagaacctcg ccgagctgga ggagggcgac gagagtggcg 3421 gcgagagcac caccaccgga acaaccggaa ccaccgccgc ctccgcgctg ggcggggctg 3481 ggggcggtgg cggtgctggc gggggcgtgg cacccaggac gggtggctgc caaaaccaac 3541 cgcagcacgg tggaatgtga cggagagtcg tgggaattta tcgcaaaata caggaaaagg 3601 ctcacaactt tttcctatta cgttagtgac tactattaac acacaaaaac caaacaaaaa 3661 ccaaaaacga aaaactcaaa aaaaaacaaa gaaaaactct tggaaaaatg caaaaaaaaa 3721 atacaaaaaa aaaccaaaaa gccaactaaa gaaatattaa acaaatgttt aaagcataca 3781 aagaatccaa aacagcaata gcaaaagtac cgtttaactt ataaagccta gagaaaaacg 3841 aaaaaggaaa ttagaaattt acttaatgga acaccgagat tgatgttgaa aatacactga 3901 aaaaaagaga tcacgaggag atgagctaac taagagaaat cttacatatt gttaaacgta 3961 cacacacaca ctaaatccaa gacaaagcaa agataatgag aaaccccatt gataagtaat 4021 actaagaaga taccaaaact accgccccct tcccccaatt atatagacga tttttgttgc 4081 atgtgtaggc aaatgatttt tgttaaattc atctgaagtg ggacatcaat cggagaaaaa 4141 ccccctgagc cccctaacca agtctcctct tttaaaccat tgactaaagt gaaatattta 4201 aaaacaagaa aaacaaccga acggaaggaa taattaatac gacttagctt aagagaagtt 4261 tttaagtttt gaatgttttg catgcccgaa cagattcatt ttactcgatt gataacgtta 4321 gatctaactt tagaccgatt aacgctaacg gcaacacaca tatggaattt tttatgattt 4381 agaccccagc gatagaagcg aaaacaaaaa gaaaaacaaa aactaaaacc aaccatgtta 4441 agtgtaagaa cccagtgaat taaaccaaaa ttgaaagcca cccgagttaa gaccatttaa 4501 ttcaaatcta aatccaaatc ccgaacccca aacaacaaag aagaacagtc tacagccaga 4561 ctgtagttgt atagtaatat atatgatata aatatttttt tttaatatta tttgtaaata 4621 atttaaatgt tggactcgaa tttaaatcaa gcggctagca aatgttgcag ccaaactaaa 4681 actaaaatga aaacaaagcc aaaaacacat aaataacata aataaggaag taagtggaga 4741 gaaaaaaagg aaggtggaaa agaaaggaaa aactattgta caattagcta aagaatttcc 4801 atttcaattt tcgattttcg atttgaattg caatttgatt tgcttccaga aaacaagaga 4861 aagagaaaga tgataaagat atagaaaagg aaaggagaag agatgagaag aaaagaaatt 4921 agagagagat aaaccgaaaa taatgtcaaa cgctgtcttc gcaaatattt ttcgctatat 4981 atttacttat atcattattt actagttact aagctactta ctgagccaca caatttaaaa 5041 acgaaagaga caagacaccc ggtcgagaaa gagagggagc atcgatgaat ttagtgaaca 5101 aacattaaac ttactggcag aaagcacaca atttacaaac cacaaagcaa accaccagaa 5161 aagactcttc aagcacaagc aatttttagt tttccaaatg aaaaatgaaa aaccaaagca 5221 aagcaaaacc aacacacaaa ggaaaagcaa aacaagaaaa aacaaaaaac a