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LOCUS XM_070218249 6019 bp mRNA linear INV 09-DEC-2024 transcript variant X1, mRNA. ACCESSION XM_070218249 VERSION XM_070218249.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6019 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6019 /gene="dnc" /note="phosphodiesterase dunce; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 Proteins" /db_xref="GeneID:108059389" CDS 661..4308 /gene="dnc" /codon_start=1 /product="3',5'-cyclic-AMP phosphodiesterase isoform X1" /protein_id="XP_070074350.1" /db_xref="GeneID:108059389" /translation="MMRLARFTQSFSFNKNAAKHRGSGSSNGNGTGNGNGNGQGLGGT NGLAASGGVGGGGGSGSGSGSEGGGSGSGSGSGKRKSKTRTKCFGGTVFRCCLPCRGG GSAAPATSPPQTPAQSPEDFKAIGGPEDTSSGAGGASGAEKPREQKQKQKQSNQKEDS DLLNRSESELDLYGGGQKKHSLADTIDTSVTTPISLKTLINDVDEELDQQLSAADIAA ASLASGLVARRAEPETLSDASVSPTAVVQQQQQQQPLLQSQPSQPQPNLVPSSGNILS QVTLYSGTNPGQNPGQNQQANPSPNSNSNQNPNQNQQQNRCSCQPQTSPLPHIKEEEE SEQQANFKHQSSLKEQQQQLPPPITIASGYCGSCESVHHSSATSSSAGTVPTGSQQPQ EYIAGTSSTPSPRIKLKFRKPHKSCWSRIVLAPIGSTGGSSSATTVIGSNSNETLASS STTGGTATQNSTQNSSSVSVAAHHRLTSSSASALASSHPSNSQLLPTSKMQAEQGSIG DLQKYHSRYLKNRRHTLANVRFDVENGQGARSPLEGGSPSAGLVLQNLPQRRESFLYR SDSDFEMSPKSMSRNSSIASERFKEQEASILVDRSHGEDLIVTPFAQILASLRSVRNN LLSLTNVPASNKSRRPNQSSSASRSGNPSGAPLSQGEEAYTRLATDTIEELDWCLDQL ETIQTHRSVSDMASLKFKRMLNKELSHFSESSRSGNQISEYICSTFLDKQQEFDLPSL RVEDNPELVAANAAASGQQSAGQYARSRSPRGPPMSQISGVKRPLSHTNSFTGERLPT FGVETPRENELGTLLGELDTWGIQIFSIGEFSVNRPLTSVAYTIFQSRELLTSLMIPP KTFLNFMTTLEDHYVKDNPFHNSLHAADVTQSTNVLLNTPALEGVFTPLEVGGALFAA CIHDVDHPGLTNQFLVNSSSELALMYNDESVLENHHLAVAFKLLQNQGCDIFCNMQKK QRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVAGSGVLLLDNYTDRIQVLENL VHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESGMDISPMCDRHNATIEKSQVG FIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSMIPPSPPPSGVDENPQEDRIR FQVTLEESDQENLAELEEGDESGGESTTTGTTGTTAASALGGAGGGGGAGGGVAPRTG GCQNQPQHGGM" misc_feature 2482..2850 /gene="dnc" /note="Phosphodiesterase 4 upstream conserved regions (UCR); Region: PDE4_UCR; pfam18100" /db_xref="CDD:465648" misc_feature 3286..4008 /gene="dnc" /note="3'5'-cyclic nucleotide phosphodiesterase; Region: PDEase_I; pfam00233" /db_xref="CDD:459723" polyA_site 6019 /gene="dnc" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gaaaagagac gaaacaacaa caaatgcagt agaacaagaa accaacagaa agggaaataa 61 aaaaaaaaga aaatagaaag cgacaacaac aaaaaagggc caggccaaac aacaacaaat 121 gtaacgcgga aaaggcagtt ttccttggcc gcagcagcag cagcatgcgg aaaaatcatc 181 cgcaaagccg caaaataaat atgatttaat aagaaaccct tcgcaaatag caataaccga 241 gagcaatatc tataaaatcc atataaatgg gctgcaatat ttttgttaaa tcagttgttt 301 ttttttcgag tgcctaaagt gtgtgcgtgc ataaataaat gcaaaaaaat ctgtgaagtt 361 aaaaattaaa aacataaagt gccaaaagtt agatagaaaa ccaaacagcc tgggcagata 421 aataaataaa taaagtgtct gaaagccgag tataaataaa taaagtgccg tgaataaatt 481 taaatatatc taaatcaagg caaatcggtg gcaaacaaag ataaacaaca aaataacaaa 541 ggcggcattt ggcaaagagc aagaagaaga agaagcagaa gccagaatcc gaggagacaa 601 aagatctccg ctagaattaa aatgtttttg caccacagat aacttccgtt cgaagtggga 661 atgatgcgtt tggcgcgatt cactcagagt ttctcgttta acaaaaatgc ggccaagcat 721 cgcggcagcg gcagcagcaa cggaaacggg accggaaacg gaaacggaaa cggccagggg 781 ttaggtggca ccaacggcct ggcagccagt ggcggcgttg gagggggcgg cgggagtggg 841 agtggcagcg gcagcgaggg cggcggcagc ggcagcggaa gtgggagtgg caagcggaaa 901 tcaaagacaa gaacaaagtg cttcggtggc acagtgtttc ggtgttgcct cccttgtcgc 961 gggggcggct ccgcagcccc cgccacaagt ccgccccaaa cacccgccca atcgccggag 1021 gatttcaagg ccattggcgg tccggaggat acgagcagcg gtgctggtgg tgctagtggt 1081 gcggaaaagc ccagagagca gaagcagaag cagaagcaaa gcaaccagaa ggaggactcg 1141 gatctgctga atcgcagcga atccgagctg gatctgtacg gcggcggcca gaagaagcac 1201 tcgctggcgg acaccatcga cacatcggtc accacaccga tctccctgaa gaccctcatc 1261 aacgacgtgg acgaggagct ggaccagcag ctgagtgcgg cggacatagc ggcagccagc 1321 ttggccagcg gtctggtggc ccgccgagcg gaaccggaaa cgctgagcga cgccagcgtc 1381 tcacccaccg cggtggtgca gcagcagcag cagcagcagc cactcttgca atcacagcca 1441 tcacagccac aacccaattt ggtgcccagc agcggcaaca tcctcagcca ggtcaccctg 1501 tacagcggca cgaatcccgg ccagaatcca ggccaaaatc agcaggccaa tcccagtccc 1561 aattcgaact caaaccaaaa tcccaaccag aatcaacagc agaatcgctg cagctgccag 1621 ccgcagactt ccccactgcc gcatatcaag gaggaggagg agtccgagca gcaggccaac 1681 ttcaagcacc agtcgagcct caaggagcag cagcagcaac tgccgccgcc gatcaccata 1741 gccagcggct actgtggcag ctgcgagagc gtccaccact cgtcggccac ctcgtcgtcg 1801 gcgggcacag tgcccactgg tagtcagcag ccgcaggagt acattgcagg tacctcctcg 1861 accccctcgc cgcgcatcaa actaaagttc cgcaagccgc acaagtcctg ctggtcgcgc 1921 atcgtccttg cgcccattgg atcgacgggc ggctcctcgt cggccaccac tgtcatcggc 1981 agcaactcga acgagacctt ggcctccagc agcaccaccg gcggcacagc cacccagaac 2041 agcacccaga acagcagcag cgtcagcgtt gccgcccacc accggctgac ctcgtcgtcg 2101 gcctccgccc tcgcctcctc gcaccccagc aactcgcagc tgctgcccac cagcaaaatg 2161 caggcggagc aggggtcaat cggcgacctg cagaagtacc acagtcggta cctcaagaat 2221 cgtcgccata cgctggccaa cgttcgtttc gatgtagaaa atggccaggg cgctcgatca 2281 ccgctcgagg gcggctctcc cagcgccggt ttggttctac agaatttgcc gcagcgtcgc 2341 gaatcgtttc tatatcgctc cgattccgac tttgagatgt cgcccaagtc catgtctcga 2401 aactcaagca tcgctagcga aaggtttaaa gaacaggaag cctctatact cgttgaccga 2461 tcccatggcg aggatctcat tgtgacgcct ttcgcccaaa ttttagccag cttacgttca 2521 gtgcgcaaca atttattaag tctgacaaat gttccagcat caaacaaatc caggcggccc 2581 aaccaatcct cgtcggcctc ccgatcggga aatccctcgg gagccccgct gtcccagggc 2641 gaggaggcct acacccgcct ggccaccgac accatcgagg agctggactg gtgcctcgac 2701 cagctggaga ccatccagac ccatcgcagc gtctccgaca tggcttcgct caagttcaaa 2761 cgcatgctca acaaggagct gtcacacttc agcgagtcca gcagatcggg aaatcagatt 2821 tccgagtaca tttgttccac atttttggac aagcagcagg agttcgactt gccgtcgctg 2881 cgcgtggagg ataatccgga gctggtggcc gccaatgccg ccgccagcgg ccagcagtcc 2941 gctggccagt acgcccgctc ccgctccccc cgcggcccgc ccatgtcgca gatcagcggc 3001 gtgaagcggc ccctttcgca caccaacagc ttcaccggcg aacggctgcc caccttcggc 3061 gtggagacgc ccagggagaa cgagctgggc accctgctcg gcgaactgga cacctggggc 3121 atccagatat tcagcatcgg cgagttcagc gtcaaccgac cgctcaccag tgtggcatac 3181 accatatttc agagtagaga attactgacc agtcttatga taccaccgaa aacttttctt 3241 aactttatga ctactctgga ggaccactac gtcaaagaca atccgtttca caattcgctg 3301 catgccgccg acgtgaccca gagcaccaat gtgctactca atacaccggc gctggagggc 3361 gtattcacac cgctcgaggt gggcggggca ctgttcgccg cttgcatcca cgatgttgat 3421 catcccggct taaccaatca gttcttggtt aactcaagtt ccgaactagc attaatgtac 3481 aatgacgaat ctgttttgga aaatcatcat ttagctgttg cctttaaatt attgcaaaat 3541 caaggatgtg atatattctg taatatgcaa aagaaacaac gccaaacatt gaggaaaatg 3601 gttattgata ttgtgctgtc cacggacatg tccaagcaca tgagtctgct ggccgacctg 3661 aagacaatgg tggaaaccaa gaaggtggcc ggctccggag tcctgctgct ggacaactac 3721 accgatcgca tacaggtgct cgagaatctg gtgcactgcg ccgatctgag caatcccacc 3781 aagccgctgc cgctttacaa gcgctgggtg gccctgctca tggaggagtt cttcctgcag 3841 ggcgacaagg agcgcgagtc gggcatggac atcagtccca tgtgcgatcg ccacaacgcc 3901 accatcgaga agtcgcaggt gggcttcatc gactatatcg tccacccgct gtgggagacc 3961 tgggcggacc tggtgcaccc ggacgcccag gacatactcg acacgcttga agagaacaga 4021 gactactacc agagcatgat accgccctcg ccgccgccgt cgggggtcga tgagaatccg 4081 caggaggaca ggatacgctt tcaagtaacc ctggaggagt ccgaccagga gaacctcgcc 4141 gagctggagg agggcgacga gagtggcggc gagagcacca ccaccggaac aaccggaacc 4201 accgccgcct ccgcgctggg cggggctggg ggcggtggcg gtgctggcgg gggcgtggca 4261 cccaggacgg gtggctgcca aaaccaaccg cagcacggtg gaatgtgacg gagagtcgtg 4321 ggaatttatc gcaaaataca ggaaaaggct cacaactttt tcctattacg ttagtgacta 4381 ctattaacac acaaaaacca aacaaaaacc aaaaacgaaa aactcaaaaa aaaacaaaga 4441 aaaactcttg gaaaaatgca aaaaaaaaat acaaaaaaaa accaaaaagc caactaaaga 4501 aatattaaac aaatgtttaa agcatacaaa gaatccaaaa cagcaatagc aaaagtaccg 4561 tttaacttat aaagcctaga gaaaaacgaa aaaggaaatt agaaatttac ttaatggaac 4621 accgagattg atgttgaaaa tacactgaaa aaaagagatc acgaggagat gagctaacta 4681 agagaaatct tacatattgt taaacgtaca cacacacact aaatccaaga caaagcaaag 4741 ataatgagaa accccattga taagtaatac taagaagata ccaaaactac cgcccccttc 4801 ccccaattat atagacgatt tttgttgcat gtgtaggcaa atgatttttg ttaaattcat 4861 ctgaagtggg acatcaatcg gagaaaaacc ccctgagccc cctaaccaag tctcctcttt 4921 taaaccattg actaaagtga aatatttaaa aacaagaaaa acaaccgaac ggaaggaata 4981 attaatacga cttagcttaa gagaagtttt taagttttga atgttttgca tgcccgaaca 5041 gattcatttt actcgattga taacgttaga tctaacttta gaccgattaa cgctaacggc 5101 aacacacata tggaattttt tatgatttag accccagcga tagaagcgaa aacaaaaaga 5161 aaaacaaaaa ctaaaaccaa ccatgttaag tgtaagaacc cagtgaatta aaccaaaatt 5221 gaaagccacc cgagttaaga ccatttaatt caaatctaaa tccaaatccc gaaccccaaa 5281 caacaaagaa gaacagtcta cagccagact gtagttgtat agtaatatat atgatataaa 5341 tatttttttt taatattatt tgtaaataat ttaaatgttg gactcgaatt taaatcaagc 5401 ggctagcaaa tgttgcagcc aaactaaaac taaaatgaaa acaaagccaa aaacacataa 5461 ataacataaa taaggaagta agtggagaga aaaaaaggaa ggtggaaaag aaaggaaaaa 5521 ctattgtaca attagctaaa gaatttccat ttcaattttc gattttcgat ttgaattgca 5581 atttgatttg cttccagaaa acaagagaaa gagaaagatg ataaagatat agaaaaggaa 5641 aggagaagag atgagaagaa aagaaattag agagagataa accgaaaata atgtcaaacg 5701 ctgtcttcgc aaatattttt cgctatatat ttacttatat cattatttac tagttactaa 5761 gctacttact gagccacaca atttaaaaac gaaagagaca agacacccgg tcgagaaaga 5821 gagggagcat cgatgaattt agtgaacaaa cattaaactt actggcagaa agcacacaat 5881 ttacaaacca caaagcaaac caccagaaaa gactcttcaa gcacaagcaa tttttagttt 5941 tccaaatgaa aaatgaaaaa ccaaagcaaa gcaaaaccaa cacacaaagg aaaagcaaaa 6001 caagaaaaaa caaaaaaca