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LOCUS XM_070218238 4629 bp mRNA linear INV 09-DEC-2024 (LOC108056473), transcript variant X4, mRNA. ACCESSION XM_070218238 VERSION XM_070218238.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4629 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4629 /gene="LOC108056473" /note="proline-rich protein 36; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108056473" CDS 288..4118 /gene="LOC108056473" /codon_start=1 /product="proline-rich protein 36" /protein_id="XP_070074339.1" /db_xref="GeneID:108056473" /translation="MSSMKGGFSTLNRWFGRKKDKSGTGSSSMGKLSKSSTQLHHLST DTDLNETSQLEYNRITPVPAATSNAPFEQTFRITVLLPKEQLFVARLGARVPLSKLLS LVCDNKQLDADKYEFRSPVDASQVYSCESTIGAVGLSEIRLCHKSESYDTFNPDVMHK FQRTGAARDSLSSSSDFSSSRHSKVTAKTPSPYSSSNSLNSMDSTGMNYTRTPVVVPP AKVLAPPPRKKRTAPRPPSQICIPEQSVPDIPASEPAYAVIVKRPQLCMSTPNLSGPP ELDCNGNSSAKSPDADSTDGHYATLELKPPVAGGPEPTPRKRLLQIKKKTAPAPPPDF QSGGDNISLASLPLPEAVTTPNIPQPAPRITTPLPIAPAVNPPLPFVNGNGSPPPTNG NVSKVLLNRTPTPEPRSLGSAAEDDDNDAASKQADSGIGEPAPSPSASPEPEAEEKSQ QESSSEDDEAIKVYNFKLCQTTKQNEPTSLAELAVLTAQEEEEQEEQVQPPLTNGTPL SETSITSWNYSVPISPPPDFSDPKMQKLKGSASPGSPLDEIVDELATIINQQRLDTLI KKQPDPRLAEIEAPKPNRLANFSIATATAKIGRADSFQAVGGGGLGGGGSEEVTSLSL RSSSHLSLNKLEQQQNGISGLGTRRSSSELSIGESPSLQSLEVIKTILNSRKNSLAES GGSASSSLSSPVTEQPKIIEKVEGLEKLAKEESSVEEEVVTKQSSATPVQKQSTPTTP SPPAVEKLLSYPVEKPSASPVEKSLPSPVQKQSIPSPSPAVEKSSPYPLQKQSTPPAV VKPSPNPVQKQSTPPPSPAVEKVLPSPVEKSSPSPVEKPSPTPIQKQLSSPVEKPLSS PVVTQQVTPLAQKQSPPVAKKPSPPVVKKMPEVSPVQVVKEEVPSSPVSPVNLRSTQP SQPIESAPSSKPLPPTYRYSGPPSINFATWSERPKSTVAIKNEGDYIFGGAGQANQRI TSQPPAKLTIEVASPILRMGIPQRKEYHVPITVKPLKDAGLEEKQEEKLEKPEVKEQP IQEETFSVQVRLKPQPKPLEKPLVQNQNQSSTLPRPAKTNRFTLPAGQSNQVVVSSLA SSNSLPRPVSSLERNRPGAVEPANPAPFGQNTLRRTGFKERMLAREQQEQEQALRIRV SGVSVNGNHTPSPAAAAAPAPATPTSPPETKPAPPAKNANVVLKSTKVELKLQEPPET RGLQIKLKSSVSQPAATPSPPPPPPVLPALKPLKARENGSGNGSGRSPTSPDPRSQLL DAIRNFKREELNRS" misc_feature <924..1865 /gene="LOC108056473" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" misc_feature <1857..>2039 /gene="LOC108056473" /note="EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes; Region: EFh_PI-PLC; cl28895" /db_xref="CDD:333715" misc_feature <2463..3584 /gene="LOC108056473" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" polyA_site 4629 /gene="LOC108056473" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttttgttaac gtcgtcgtcg gcgccgcctc gcaaaagttg ctcctctctt cgtccagaaa 61 gagagagaaa gccaagattt cgcagcgcac aaatcgcacg ccattttcta gcatgctcta 121 ggaatattac gaaacccaat cgaaatttaa aggaaaacgc cgaattacac acgtcaagac 181 acgtttgaaa cggaagcgga agcggaaacg gaagtaggtg aaggtggaag aagcagagaa 241 caagtgagcg agagagaggg aaacatttga gaagccacgc ccacaacatg agtagcatga 301 agggcggctt ctccacactg aatcgctggt ttggccggaa aaaggacaaa tccggcactg 361 gcagctcctc catgggcaag ctgtccaagt cgtcgacaca gctgcaccat ttgtccacgg 421 acacggactt gaacgagact agtcagctgg agtacaaccg gataacgcca gtgcccgcgg 481 ccaccagcaa tgcgcccttc gagcagacat tccgcatcac cgttctgctg cccaaggaac 541 agctctttgt ggcccgcctg ggagccaggg tgccgctgag caagctcctt tcgctcgtct 601 gcgacaacaa gcaactggat gcggacaagt acgagttccg gagtccagtg gacgctagtc 661 aggtgtacag ctgcgaatcg acgatcggag cagtgggtct ctcggagatt cggctgtgcc 721 acaagtcgga gtcctacgac accttcaatc cggatgtgat gcacaagttc cagcgcaccg 781 gagcggcgcg ggattcccta agcagcagtt ccgatttcag cagcagtcgt cactcgaagg 841 ttacggccaa aacgccaagt ccgtatagtt ccagcaactc gctgaactcg atggactcca 901 cgggcatgaa ctatacgcgt acgccggtgg tggtgccgcc ggcaaaggtt ttggcaccac 961 cgccgcgcaa aaagcgaacg gcaccgaggc cgccgagtca gatttgcatc ccggaacagt 1021 cggttccgga cattccggct agcgagcccg cctatgcggt gattgtcaag cgtccgcagc 1081 tctgcatgtc cacgccgaat ctctctggac caccggagtt ggattgtaat ggcaacagta 1141 gcgccaagtc accggatgcc gactccacgg acggtcacta tgccaccttg gagctaaagc 1201 ctccggtggc aggtggtccc gaaccgactc cccgcaagcg attgctgcag atcaagaaga 1261 aaacggcacc ggcaccaccg ccggacttcc aaagtggcgg ggataacata tcactggcct 1321 cgctgccact tcctgaagcg gtgactactc cgaatattcc gcagccagct cccaggatca 1381 ccacaccatt gcccattgcg ccggcggtta atccgccatt gccttttgtg aatggcaatg 1441 gatcaccacc tccaaccaat ggcaatgtat ccaaagtcct tctaaataga actcccacgc 1501 cggagccccg atctttgggc agtgccgccg aggatgatga caatgatgcg gcttccaagc 1561 aagcggattc gggcattgga gagccggcac catcgccctc ggcttcaccg gaacccgagg 1621 cggaggagaa atcccagcag gaatccagtt ccgaggacga cgaggccatc aaggtgtaca 1681 atttcaagct gtgccagacc accaagcaaa atgagcccac cagtttggcg gaactggcag 1741 tgctgacggc gcaagaggag gaggagcagg aggagcaagt gcagccaccg ctgaccaatg 1801 gaaccccctt gagcgagacc tcaatcacct cgtggaacta ctcggtgccc atatcgccgc 1861 ctcccgactt ttccgatccg aaaatgcaga agcttaaggg ttctgcgagt cccggttcgc 1921 cgctggacga gattgtggat gaactggcga ccataatcaa tcaacaacgt ctggacacgc 1981 tgatcaagaa gcagcccgat ccacggctgg cggagattga ggcgccgaaa ccgaatcgat 2041 tggccaattt cagcatagcc acggccacgg ccaaaattgg acgagccgac tcgtttcagg 2101 cggtgggagg aggaggatta ggaggaggag gatcagagga ggtaacatcc ctcagtcttc 2161 gcagctcctc gcatctctcc ctgaacaaac tggagcagca gcagaatggc atcagtggcc 2221 tgggcacgag gcgctcctcc agcgagctga gcatcggtga atcgccctcg ttgcaaagtc 2281 tcgaggtgat caagaccatc ttgaactcgc ggaagaacag cttggctgag agtggaggca 2341 gtgcatcatc atcattatca tcgcctgtta cagagcaacc aaagatcatc gagaaggtgg 2401 aagggctgga gaagctggcc aaagaagagt cttctgtgga ggaggaagtg gttaccaagc 2461 agtcgtcagc cactcctgtc cagaaacagt cgactccgac tactccttct cctcctgctg 2521 ttgagaaatt attatcttac cctgttgaga aaccatcagc ttctcctgtt gagaaatcat 2581 taccttctcc tgtccagaaa caatcgattc cttctccttc tcctgctgtt gagaaatcat 2641 caccttatcc tctgcaaaaa cagtcgactc ctcctgctgt tgtgaaacca tcacccaatc 2701 ctgtccagaa acaatcgact cctcctcctt ctcctgctgt tgagaaagta ttaccttctc 2761 ccgttgagaa atcatcacct tctcctgttg agaaaccctc acccactcca atacaaaagc 2821 agctttcttc gccagttgag aagcctttat cctcgcctgt ggtgactcag caggtgactc 2881 cattggctca gaagcaatcc ccgccagtgg ccaaaaagcc atcgcccccg gtggtcaaga 2941 agatgccaga ggtttcacca gttcaagtgg tcaaagagga agttcccagc tcgccagtca 3001 gtccggttaa cctgaggagt acccaaccaa gtcaacccat tgaatccgct cccagctcca 3061 agcccctgcc acccacttat cgctattcgg ggccaccgag cattaatttc gccacctgga 3121 gcgaacgacc caagtcgacg gtggccatca agaacgaggg agactatatc tttggtgggg 3181 ctgggcaggc caatcaaagg atcacctcgc agccgcctgc caagctcacc atcgaggtgg 3241 cttcacccat tctgaggatg ggcattccgc agcgaaagga gtaccacgtt cccattacgg 3301 ttaagccgct aaaggatgcg ggtttggagg agaagcaaga ggaaaagctg gagaaacccg 3361 aggtcaaaga gcagccaatt caagaggaaa ccttttccgt tcaggttaga ctcaagccgc 3421 agccgaaacc cttggagaaa cccttggttc agaaccaaaa tcaatcttcc accctgccgc 3481 gtccagccaa gaccaataga ttcaccctgc ccgctggcca aagcaaccag gtggtggtct 3541 ctagcctggc cagctccaat tccctgcctc gtccggtctc cagtctggag aggaatcgac 3601 caggagcagt ggaaccagct aatcccgctc cctttggcca gaacaccctg cggcgcacgg 3661 gtttcaagga gcgcatgttg gccagggagc agcaggaaca agagcaggcc ttgaggatta 3721 gggtctctgg ggtgtcggtg aatggaaatc acactccttc tccagcagct gcagctgctc 3781 ctgctcctgc cacgcccaca tccccgccag aaaccaagcc agcgccgccg gcaaagaatg 3841 cgaatgtggt gctcaagtcc accaaagtgg agctgaagct ccaggagcca ccggaaacta 3901 gggggctaca gatcaagcta aagtcctcgg tatcccagcc agcggccacg ccctcgccgc 3961 cgccaccgcc tcccgtactt ccggctctga agcccctgaa ggcccgggaa aacggaagcg 4021 gaaacggaag tggacgcagt cccacatcac cggatccgcg ctcccaactc ctggatgcga 4081 tacggaattt caaacgcgag gagctcaacc gatcctgagt ttttgcgaaa ataaacatta 4141 ttagataaag aaataacaag aaaaatcagg cacaaaatca caaaagcagc gcacaagtta 4201 tatatttttt aaaccgttaa cagtaaattt tgtgttgagt ttgtaaataa tttcgaaaaa 4261 gaaacgccaa gatttagtag aacttttttt tgcacaaacc catccccctc cctaaaaaac 4321 ccagcgcttc taaagcgcct aataccccaa tttttttaac taatcttagt tttttgttat 4381 gaactatgta gttttttaat tatttgtttt agtcattagg tcacaagaga acccaaaaaa 4441 gaaaaaaact gaaaaataca agataaagaa aaacgaaaag cgaaagattt atctaatata 4501 cacgtatgtt attatgccta tataatattt cgtatgtcat agtgaaatat agtaaccaat 4561 tttctaacca atgggactgg tctacttagt cgtgtcaaat aaacaaaaat caaatggtag 4621 cgaaaacaa