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LOCUS XM_070218236 4702 bp mRNA linear INV 09-DEC-2024 (LOC108056473), transcript variant X1, mRNA. ACCESSION XM_070218236 VERSION XM_070218236.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4702 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4702 /gene="LOC108056473" /note="proline-rich protein 36; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108056473" CDS 361..4191 /gene="LOC108056473" /codon_start=1 /product="proline-rich protein 36" /protein_id="XP_070074337.1" /db_xref="GeneID:108056473" /translation="MSSMKGGFSTLNRWFGRKKDKSGTGSSSMGKLSKSSTQLHHLST DTDLNETSQLEYNRITPVPAATSNAPFEQTFRITVLLPKEQLFVARLGARVPLSKLLS LVCDNKQLDADKYEFRSPVDASQVYSCESTIGAVGLSEIRLCHKSESYDTFNPDVMHK FQRTGAARDSLSSSSDFSSSRHSKVTAKTPSPYSSSNSLNSMDSTGMNYTRTPVVVPP AKVLAPPPRKKRTAPRPPSQICIPEQSVPDIPASEPAYAVIVKRPQLCMSTPNLSGPP ELDCNGNSSAKSPDADSTDGHYATLELKPPVAGGPEPTPRKRLLQIKKKTAPAPPPDF QSGGDNISLASLPLPEAVTTPNIPQPAPRITTPLPIAPAVNPPLPFVNGNGSPPPTNG NVSKVLLNRTPTPEPRSLGSAAEDDDNDAASKQADSGIGEPAPSPSASPEPEAEEKSQ QESSSEDDEAIKVYNFKLCQTTKQNEPTSLAELAVLTAQEEEEQEEQVQPPLTNGTPL SETSITSWNYSVPISPPPDFSDPKMQKLKGSASPGSPLDEIVDELATIINQQRLDTLI KKQPDPRLAEIEAPKPNRLANFSIATATAKIGRADSFQAVGGGGLGGGGSEEVTSLSL RSSSHLSLNKLEQQQNGISGLGTRRSSSELSIGESPSLQSLEVIKTILNSRKNSLAES GGSASSSLSSPVTEQPKIIEKVEGLEKLAKEESSVEEEVVTKQSSATPVQKQSTPTTP SPPAVEKLLSYPVEKPSASPVEKSLPSPVQKQSIPSPSPAVEKSSPYPLQKQSTPPAV VKPSPNPVQKQSTPPPSPAVEKVLPSPVEKSSPSPVEKPSPTPIQKQLSSPVEKPLSS PVVTQQVTPLAQKQSPPVAKKPSPPVVKKMPEVSPVQVVKEEVPSSPVSPVNLRSTQP SQPIESAPSSKPLPPTYRYSGPPSINFATWSERPKSTVAIKNEGDYIFGGAGQANQRI TSQPPAKLTIEVASPILRMGIPQRKEYHVPITVKPLKDAGLEEKQEEKLEKPEVKEQP IQEETFSVQVRLKPQPKPLEKPLVQNQNQSSTLPRPAKTNRFTLPAGQSNQVVVSSLA SSNSLPRPVSSLERNRPGAVEPANPAPFGQNTLRRTGFKERMLAREQQEQEQALRIRV SGVSVNGNHTPSPAAAAAPAPATPTSPPETKPAPPAKNANVVLKSTKVELKLQEPPET RGLQIKLKSSVSQPAATPSPPPPPPVLPALKPLKARENGSGNGSGRSPTSPDPRSQLL DAIRNFKREELNRS" misc_feature <997..1938 /gene="LOC108056473" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" misc_feature <1930..>2112 /gene="LOC108056473" /note="EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes; Region: EFh_PI-PLC; cl28895" /db_xref="CDD:333715" misc_feature <2536..3657 /gene="LOC108056473" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" polyA_site 4702 /gene="LOC108056473" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agcaaatacg caggtgaaat gtaaaaccat cgggtcgact ttgaaacata ctttagaaat 61 cgaaattgtt ggactgcaaa cataactatt ttttttattt ttggtagaga gggtattatg 121 gatgtgtccc caactggaac agaacagaaa tttcgcagcg cacaaatcgc acgccatttt 181 ctagcatgct ctaggaatat tacgaaaccc aatcgaaatt taaaggaaaa cgccgaatta 241 cacacgtcaa gacacgtttg aaacggaagc ggaagcggaa acggaagtag gtgaaggtgg 301 aagaagcaga gaacaagtga gcgagagaga gggaaacatt tgagaagcca cgcccacaac 361 atgagtagca tgaagggcgg cttctccaca ctgaatcgct ggtttggccg gaaaaaggac 421 aaatccggca ctggcagctc ctccatgggc aagctgtcca agtcgtcgac acagctgcac 481 catttgtcca cggacacgga cttgaacgag actagtcagc tggagtacaa ccggataacg 541 ccagtgcccg cggccaccag caatgcgccc ttcgagcaga cattccgcat caccgttctg 601 ctgcccaagg aacagctctt tgtggcccgc ctgggagcca gggtgccgct gagcaagctc 661 ctttcgctcg tctgcgacaa caagcaactg gatgcggaca agtacgagtt ccggagtcca 721 gtggacgcta gtcaggtgta cagctgcgaa tcgacgatcg gagcagtggg tctctcggag 781 attcggctgt gccacaagtc ggagtcctac gacaccttca atccggatgt gatgcacaag 841 ttccagcgca ccggagcggc gcgggattcc ctaagcagca gttccgattt cagcagcagt 901 cgtcactcga aggttacggc caaaacgcca agtccgtata gttccagcaa ctcgctgaac 961 tcgatggact ccacgggcat gaactatacg cgtacgccgg tggtggtgcc gccggcaaag 1021 gttttggcac caccgccgcg caaaaagcga acggcaccga ggccgccgag tcagatttgc 1081 atcccggaac agtcggttcc ggacattccg gctagcgagc ccgcctatgc ggtgattgtc 1141 aagcgtccgc agctctgcat gtccacgccg aatctctctg gaccaccgga gttggattgt 1201 aatggcaaca gtagcgccaa gtcaccggat gccgactcca cggacggtca ctatgccacc 1261 ttggagctaa agcctccggt ggcaggtggt cccgaaccga ctccccgcaa gcgattgctg 1321 cagatcaaga agaaaacggc accggcacca ccgccggact tccaaagtgg cggggataac 1381 atatcactgg cctcgctgcc acttcctgaa gcggtgacta ctccgaatat tccgcagcca 1441 gctcccagga tcaccacacc attgcccatt gcgccggcgg ttaatccgcc attgcctttt 1501 gtgaatggca atggatcacc acctccaacc aatggcaatg tatccaaagt ccttctaaat 1561 agaactccca cgccggagcc ccgatctttg ggcagtgccg ccgaggatga tgacaatgat 1621 gcggcttcca agcaagcgga ttcgggcatt ggagagccgg caccatcgcc ctcggcttca 1681 ccggaacccg aggcggagga gaaatcccag caggaatcca gttccgagga cgacgaggcc 1741 atcaaggtgt acaatttcaa gctgtgccag accaccaagc aaaatgagcc caccagtttg 1801 gcggaactgg cagtgctgac ggcgcaagag gaggaggagc aggaggagca agtgcagcca 1861 ccgctgacca atggaacccc cttgagcgag acctcaatca cctcgtggaa ctactcggtg 1921 cccatatcgc cgcctcccga cttttccgat ccgaaaatgc agaagcttaa gggttctgcg 1981 agtcccggtt cgccgctgga cgagattgtg gatgaactgg cgaccataat caatcaacaa 2041 cgtctggaca cgctgatcaa gaagcagccc gatccacggc tggcggagat tgaggcgccg 2101 aaaccgaatc gattggccaa tttcagcata gccacggcca cggccaaaat tggacgagcc 2161 gactcgtttc aggcggtggg aggaggagga ttaggaggag gaggatcaga ggaggtaaca 2221 tccctcagtc ttcgcagctc ctcgcatctc tccctgaaca aactggagca gcagcagaat 2281 ggcatcagtg gcctgggcac gaggcgctcc tccagcgagc tgagcatcgg tgaatcgccc 2341 tcgttgcaaa gtctcgaggt gatcaagacc atcttgaact cgcggaagaa cagcttggct 2401 gagagtggag gcagtgcatc atcatcatta tcatcgcctg ttacagagca accaaagatc 2461 atcgagaagg tggaagggct ggagaagctg gccaaagaag agtcttctgt ggaggaggaa 2521 gtggttacca agcagtcgtc agccactcct gtccagaaac agtcgactcc gactactcct 2581 tctcctcctg ctgttgagaa attattatct taccctgttg agaaaccatc agcttctcct 2641 gttgagaaat cattaccttc tcctgtccag aaacaatcga ttccttctcc ttctcctgct 2701 gttgagaaat catcacctta tcctctgcaa aaacagtcga ctcctcctgc tgttgtgaaa 2761 ccatcaccca atcctgtcca gaaacaatcg actcctcctc cttctcctgc tgttgagaaa 2821 gtattacctt ctcccgttga gaaatcatca ccttctcctg ttgagaaacc ctcacccact 2881 ccaatacaaa agcagctttc ttcgccagtt gagaagcctt tatcctcgcc tgtggtgact 2941 cagcaggtga ctccattggc tcagaagcaa tccccgccag tggccaaaaa gccatcgccc 3001 ccggtggtca agaagatgcc agaggtttca ccagttcaag tggtcaaaga ggaagttccc 3061 agctcgccag tcagtccggt taacctgagg agtacccaac caagtcaacc cattgaatcc 3121 gctcccagct ccaagcccct gccacccact tatcgctatt cggggccacc gagcattaat 3181 ttcgccacct ggagcgaacg acccaagtcg acggtggcca tcaagaacga gggagactat 3241 atctttggtg gggctgggca ggccaatcaa aggatcacct cgcagccgcc tgccaagctc 3301 accatcgagg tggcttcacc cattctgagg atgggcattc cgcagcgaaa ggagtaccac 3361 gttcccatta cggttaagcc gctaaaggat gcgggtttgg aggagaagca agaggaaaag 3421 ctggagaaac ccgaggtcaa agagcagcca attcaagagg aaaccttttc cgttcaggtt 3481 agactcaagc cgcagccgaa acccttggag aaacccttgg ttcagaacca aaatcaatct 3541 tccaccctgc cgcgtccagc caagaccaat agattcaccc tgcccgctgg ccaaagcaac 3601 caggtggtgg tctctagcct ggccagctcc aattccctgc ctcgtccggt ctccagtctg 3661 gagaggaatc gaccaggagc agtggaacca gctaatcccg ctccctttgg ccagaacacc 3721 ctgcggcgca cgggtttcaa ggagcgcatg ttggccaggg agcagcagga acaagagcag 3781 gccttgagga ttagggtctc tggggtgtcg gtgaatggaa atcacactcc ttctccagca 3841 gctgcagctg ctcctgctcc tgccacgccc acatccccgc cagaaaccaa gccagcgccg 3901 ccggcaaaga atgcgaatgt ggtgctcaag tccaccaaag tggagctgaa gctccaggag 3961 ccaccggaaa ctagggggct acagatcaag ctaaagtcct cggtatccca gccagcggcc 4021 acgccctcgc cgccgccacc gcctcccgta cttccggctc tgaagcccct gaaggcccgg 4081 gaaaacggaa gcggaaacgg aagtggacgc agtcccacat caccggatcc gcgctcccaa 4141 ctcctggatg cgatacggaa tttcaaacgc gaggagctca accgatcctg agtttttgcg 4201 aaaataaaca ttattagata aagaaataac aagaaaaatc aggcacaaaa tcacaaaagc 4261 agcgcacaag ttatatattt tttaaaccgt taacagtaaa ttttgtgttg agtttgtaaa 4321 taatttcgaa aaagaaacgc caagatttag tagaactttt ttttgcacaa acccatcccc 4381 ctccctaaaa aacccagcgc ttctaaagcg cctaataccc caattttttt aactaatctt 4441 agttttttgt tatgaactat gtagtttttt aattatttgt tttagtcatt aggtcacaag 4501 agaacccaaa aaagaaaaaa actgaaaaat acaagataaa gaaaaacgaa aagcgaaaga 4561 tttatctaat atacacgtat gttattatgc ctatataata tttcgtatgt catagtgaaa 4621 tatagtaacc aattttctaa ccaatgggac tggtctactt agtcgtgtca aataaacaaa 4681 aatcaaatgg tagcgaaaac aa