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PREDICTED: Drosophila takahashii TNF receptor-associated factor


LOCUS       XM_070218217            1300 bp    mRNA    linear   INV 09-DEC-2024
            family protein DDB_G0272098-like (LOC138913760), transcript variant
            X3, mRNA.
ACCESSION   XM_070218217
VERSION     XM_070218217.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1300
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1300
                     /gene="LOC138913760"
                     /note="TNF receptor-associated factor family protein
                     DDB_G0272098-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon."
                     /db_xref="GeneID:138913760"
     CDS             725..1252
                     /gene="LOC138913760"
                     /codon_start=1
                     /product="uncharacterized protein isoform X3"
                     /protein_id="XP_070074318.1"
                     /db_xref="GeneID:138913760"
                     /translation="MIVSQNFKTEICLFLQNLNKEVANTISSGVQKEFQNFNKKEVNN
                     TISSGVLKKFQNLNKKEVKDDALDSYDEDDDDDDDDDHDVNIFDEDNPEPCITRSPSE
                     EESILVEGGISNYIQTIPLNLDKDNDEYIKSIPLSNDDNKIYILEGGINSYVQTIPLN
                     IEESKQIECNSKKTF"
     polyA_site      1300
                     /gene="LOC138913760"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agttttcagt ttccgtctat tcgttcccgc aaatcaattt cggatcgttt actcgtttgc
       61 gcaagtcaat ttcggatcgt ttattcgttt gcgcgtgcat ttatcaaaca acttaaaatg
      121 tcgttcttga taatattttt tttaatatca ttaatgaatc cggttgtgaa aatgttgccg
      181 gtgcctagtg aaatgttaat cattgacaaa ccctctatct caaataactc aattggagta
      241 tttataaata tgccaaaatt aaataaaatc ataaaaattg acttaaaatt cgagatcttg
      301 gaagatagcc atatttttat ggatcttatg aacaataata ctaatgacag tgaaaaaaat
      361 ttaaaaagtg aagtggacat gaaaataatt aatgctaata atagtattaa tacaactgtg
      421 cttgaagaaa aaataaaaac aacaacaaca attacaccta caacatcaac atcaacatca
      481 aacccaccta ctttgataag taataaggag gaggaggagg aagaagaaga agaatcaagt
      541 accccaacat ctacaacaac aaccacatct gcaactacaa ctacatctgc aactacaaca
      601 acatctgcaa caacaacaac aaactcactc aatcattttg atattactaa agatacaaat
      661 tttgagaaaa tagaaaataa aagcgtagga gctgaaaaat cacaaggaat tggtattggt
      721 atcgatgata gtgagtcaga atttcaaaac ggaaatatgt ttgtttttgc agaatttaaa
      781 taaagaagtt gctaatacta tttcgagtgg agtacaaaaa gaatttcaaa actttaacaa
      841 aaaagaggtt aataatacta tttcgagtgg agtactaaaa aaatttcaaa accttaacaa
      901 aaaagaggtt aaagacgacg ctctggattc gtatgatgaa gatgacgatg atgatgatga
      961 tgatgaccat gatgtgaata ttttcgatga ggataatcca gagccatgta ttacaagatc
     1021 acctagtgag gaggaatcta ttcttgtcga aggtggaata agtaactaca tacaaactat
     1081 tcctttaaat ttagataagg ataatgatga atatataaaa tcaattcctt taagtaatga
     1141 tgataataaa atctatatat tagagggtgg tataaatagt tatgtacaaa ctataccact
     1201 aaatatagaa gaaagtaagc aaattgaatg taattcgaag aaaacatttt aattgttctt
     1261 taaaataaaa aatttataat attgtttttg gaaattttaa