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LOCUS XM_070218208 4510 bp mRNA linear INV 09-DEC-2024 homolog scalloped (sd), transcript variant X5, mRNA. ACCESSION XM_070218208 VERSION XM_070218208.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4510 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4510 /gene="sd" /note="TEA domain transcription factor 1 homolog scalloped; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:108056687" CDS 835..2142 /gene="sd" /codon_start=1 /product="protein scalloped isoform X5" /protein_id="XP_070074309.1" /db_xref="GeneID:108056687" /translation="MKNITSSSTCSTGLLQLQNNLSCTELEVAEKAEQQAVGPGTIPS PWTPVNAGPPGALGSADTNGSMVDSKNLDVGDMSDDEKDLSSADAEGVWSPDIEQSFQ EALSIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKL REIQAKIKVQFWQPGLQPSTSQDIKPFAQPPYPAGKTSTAVSGDETGIPPSQLPWEGR AIATHKFRLLEFTAFMEIQRDDMYNRHLFVQLGGKPSFSDPLLETVDIRQIFDKFPEK SGGLKDLYEKGPQNAFYLVKCWADLNTDLTTGSETGDFYGVTSQYESNENVVLVCSTI VCSFGKQVVEKVESEYSRLENNRYVYRIQRSPMCEYMINFIQKLKNLPERYMMNSVLE NFTILQVMRARETQETLLCIAYVFEVAAQNSGTTHHIYRLIKE" misc_feature 1096..1299 /gene="sd" /note="TEA domain; Region: TEA; smart00426" /db_xref="CDD:128703" misc_feature 1504..2130 /gene="sd" /note="YAP binding domain; Region: YBD; pfam17725" /db_xref="CDD:435993" polyA_site 4510 /gene="sd" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttagctgagt tgagttgagt tggccaggcc aagaagcagg cgcaacaacc gaacgcgaac 61 gcgagcgcag ggaaacaaca agaaaacaac aatcccagtc ccaatcccag caatacgaat 121 cggacaaccc aacaaccaga ccagaccaga ccagctatag tgctatagtg tgttatcgac 181 gctgacgtcg gcgtcgttct ttgtattgat tcgaatttgg attcggattc agtcgatgag 241 tttctctcgc ttctgcgcgt tgcgtttttc gcagtgtttc cgcgattttt cgttgtcgtc 301 atcgttgttt cgtatcgttt cgtttcgtct cgtctcgttt cgttgttgtg tgtggtgtgt 361 ggtgtatagt gcgccgcctc ctctcatttc agcccccttt tttcgtacag ccgtgagtgg 421 ctgtaaaagt ttccatcccg tcccagacgt tagctgctac taagtataac taagctatat 481 ggtataataa taaaacagag aaacaaaaaa accgctccat cgcgttatca acggacatag 541 ataataacac acccaatata aagtctgaaa aaacagttac tgttacaagc gaataataat 601 aataagagtg agtagtgagt gccggagtga gtgcctttga ccagccgaga cgacgacggt 661 acggtacggt tcttgatggt gacatcagag tctaaatcta gcgcgaacag attttaattc 721 cgtgaactag tagacgacgc acagtcaccg agtaccgagt ctacgtacct ctcatatcgg 781 gcatacccgt gaacccaacc aaccaacccg tgaaaacgac aagaaactgg ctgcatgaaa 841 aacatcacca gctcgagcac ttgcagcact gggctgctgc aattgcagaa caacctgagc 901 tgcactgagt tggaggttgc ggagaaggca gaacagcagg cagttggacc cggcaccata 961 ccatcaccgt ggactccagt gaatgccggt cctccaggtg cccttggatc ggcagacaca 1021 aatggcagca tggtggatag caaaaacctg gatgttggtg atatgagcga tgacgaaaag 1081 gatttatcct ccgccgatgc cgaaggtgta tggagtcccg atatcgaaca gagctttcaa 1141 gaggctttat ctatatatcc gccgtgcgga cgtagaaaaa tcatcttatc cgacgagggt 1201 aaaatgtatg gtcgcaacga actgatcgca cgatatataa aactgcgcac aggcaagacg 1261 agaaccagga aacaagtcag ctcgcacatc caagtgctgg ctagacggaa actccgcgag 1321 atccaggcga aaatcaaagt gcaattctgg caacctggac tacagccaag cacgtcccaa 1381 gacatcaagc ccttcgccca gccaccctat cccgccggca aaacgtcgac ggcggtgtcc 1441 ggggacgaga ctggaattcc gccctcacaa ttgccctggg aaggtcgagc cattgccacg 1501 cacaaattcc gcctactcga gtttacggcg ttcatggaaa tccagagaga tgatatgtat 1561 aaccgtcacc ttttcgttca actcggcggt aagccatcct tttccgatcc actgcttgag 1621 accgttgata tacgacaaat attcgacaag tttccggaaa agtcgggggg cctcaaagat 1681 ctctacgaaa agggtccaca gaatgcgttt tacctagtta aatgctgggc ggacctgaat 1741 accgacctaa cgaccggcag cgaaacgggt gatttctatg gcgtaaccag ccaatacgaa 1801 agcaacgaga atgtcgtgct cgtgtgctcc acgatcgttt gctcttttgg caaacaggtg 1861 gtggagaagg tggaaagcga gtactcgcgg ctggagaaca atcgctatgt gtaccgcatc 1921 cagcggtctc cgatgtgcga gtacatgatc aatttcattc agaagctgaa gaacctaccg 1981 gaacgctata tgatgaacag tgtgctggaa aactttacaa tattgcaagt aatgagagcc 2041 cgcgaaacgc aggagacact gctgtgcata gcctatgtgt ttgaggtagc ggcccagaac 2101 agcggtacca cccaccatat ataccggtta attaaggaat agcaaaagct gcatggagca 2161 gagcccgacc tgtctgcgaa tcccgtcatc aacacacaag ttcacaaata tatcagcgac 2221 gataatagta tcaatgcgaa tgccaagaat tgcgagggta aggcgagtca agacaacacc 2281 aagagtgcca gaagcaacat caacagcagc agcaacagca gcaacaacag cagcagcaac 2341 aacagcagca gcaacagcaa tattaagaat aggaatctat ctgctacact tattaagcaa 2401 tcacttagct cgccgaacca acatcataac gaaatcgatg ccttgactgc acttcaagtg 2461 gaggaggtta tatatacaca gtcacaagga aataccagtt accagttgga ctccgaatcg 2521 agcaacaaca ataacgtacc agagccaaca acactccagc agcaacagca acataccgcc 2581 tatgaggatc gtcaagtagt ccttccacca tacgacctat gcatcggcaa caagcaaccg 2641 caaccgcaac aggaactgga actcgaactg gagcagaagc agctggagag cactagctat 2701 gagcagttcc tcaagctgtc cgctcatgaa tattcgcaat cagaaccaag aagctccgca 2761 gctgctctaa atctcagcag tattggcgaa aaggaatcag cagtgggagg tgaatccaag 2821 ccggaacttg aagatcaccc agaatttcgg acagaggaca tccgaaccac tgccgattgt 2881 gggatcatca gtaacaaagg ccgtgagccg tgagcgccat ataaaaccag cagcctttaa 2941 gcaaggttga ggctaatttt aagggctaga aatataagga acgacaccat cagaactttt 3001 tgttttccac ccccaaacga aaaacgaaaa aaaaggagcc tcaaaaacga tcgattggtg 3061 tggtgttcag tatcgaaatc agatttttat ttgtgcaaaa taaaaagtgt atcatatttt 3121 atgttacaat aattatttga aaggctcttt agttcagcgt agagtgcttt ctgtaaaatt 3181 gtactataca tgcataaaaa aaaatacatt taaatgatct caaagttact taaaacatat 3241 tttttgtgta taattttttt tatgaaaact ttacaaaatc ctgaaaatga aaaaaaaaaa 3301 ttaaaagaaa agagaagaga tgatcgtgcg ctgattttta aaaaatagga tagtaagagt 3361 atatattgac taatatgttt gaaacaaaga acgccgcgaa agaaacagat acaatatagt 3421 tttccgaatt accattagat atgcatgatt atgtgcaaat agagttaagg tacttttttt 3481 tttatataaa agcttttgca tagggctaca aaatgtatag aaataatatg ttagttctat 3541 tttatttgaa gcttgatctt tcatttagca agagtgcagt gcagaggaaa gaaagggaga 3601 gcaaaggagc ggaatggaat agaaagggaa agataggata gctggctgga gtggaaaccg 3661 atttggagct agataaggta acttcgagaa cttaagatca aagtatatta caatttgtta 3721 accgaaatcg aaatcgaaat cctggcaaga ggcgagacgc gatgaggagg gaaaaggata 3781 tagaatcgag cgaaagatgt tgtgtgttac gcgatggttt ttgtctatcc attcgtattg 3841 tagtggcaaa atggatatgt aagtaattga attaagcatg tgtcgaatga tccaccgtta 3901 attaaattat taattactga tttaaattca ttagtattaa aaatgcccat attatataat 3961 ataacaagta aaactggtat gtaattagcc attttctgca tccaccgaag acaagctcga 4021 actcgaacac atctaaaatg tccaaattgt aagaaattat acatatatgc agaagaagta 4081 acataaagat ttattttccg atctaaataa aaaaacaaaa ataaaagtaa aagtaatgat 4141 agagataacg ataacgaaaa tgtattctga atgtaaaaca gcctaattaa aattatcgta 4201 ataataataa tataattaca catatatatt taccaaataa tataacatat ttatgctcta 4261 aagtatatac gactacaaca aatacgcatt ttttgttcgt agataagata agttaatgtg 4321 aaagaaataa tatgattgca tactaaaaag ttccacaaca atgacagttg aattttattt 4381 cgagagctaa gaaaaccagc aacaaaaata ttttaaagct atagacttaa aaatattatt 4441 attaaagatc actaatgaat atggttggca aaatataggt ggagagtaaa tataataaat 4501 tcaaatttaa