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LOCUS XM_070218205 2813 bp mRNA linear INV 09-DEC-2024 (LOC108056747), transcript variant X2, mRNA. ACCESSION XM_070218205 VERSION XM_070218205.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2813 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2813 /gene="LOC108056747" /note="uncharacterized LOC108056747; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:108056747" CDS 100..2388 /gene="LOC108056747" /codon_start=1 /product="uncharacterized protein isoform X2" /protein_id="XP_070074306.1" /db_xref="GeneID:108056747" /translation="MSAPKKQTSTGRRVIVHLRDIALHLKAADNTLCDCVQWNCEELK RNPTTWKRYPLEAASCPRESSENRVPKDMIEHVDACHSARSQIFGCQDAVYNVDHSPF VFPVSFKTFENNLNRMVVFDMIGKGLEDLLMLAANDAYRYQTLQEFFFRFYVQPEKRP TIKIFKEEVPNILFAKLLESARLHEEKATRTNAENATIKALQSHSIITFEVFSENLLN LPEIVEQMRQRDENYVRKNFDQCAFDFYLAFYITPEIRKKYKCELLPSNENMEEQMLA IPGKKMAKELRQSLPQLATPSPALVMPRKRAPKRSAEGSPIPFKVFRRHVSNLENIAN QMLLCDEYRGKSKEEAIREYYKGFYSGPEMRQKFPCRFKPCPAKKLHHLLSFPPEEPT SEFAHFRSVSQPQVEPKKSELNAVKPSPISEILDSACKPKNDVDKSTDVITSPNFNNN CVDDNEILYLSSGSDTEYEEEPSPQISPPIFEEMEDIFHTYLPQTPPNLQITEEIEDI SQSYVPETPIHLAPNILPHEQVIDLDASQSLDCFAMPKPKENDTNVEILDQMLKEKVI DLDASQSLDCFAMPKPKENDTNVAILDPMLKDQVIDLNASQSLDCFAMPKPKENDTNV AILDPMLKDQVINLNASQSLDCFAMPKPKENDTSVAILDPMLKKPIDWESSSAPELPY NIIKISVIPGKRSAASQDSASKRVKLVNEKQSMDVTDITSPQPEVNITPSQDFAAGDS LLECSQLQRLLDSPSFKVRCIY" polyA_site 2813 /gene="LOC108056747" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtctatccgt tgtgcgtgcc cactatttct ttcggcttgc aaattttggc ggttctagtt 61 gcttcggctg ggtgagatta attttgttaa gtttaggcca tgtctgcgcc aaaaaagcag 121 acatcaacag gcaggagggt gatcgtgcac ttgcgtgata tagcactcca tttgaaagct 181 gccgataata cattgtgtga ctgtgttcaa tggaactgcg aggagttgaa gcgaaatccc 241 actacatgga agcggtatcc cttggaggcc gcatcatgtc cccgggagtc ttccgagaac 301 cgagtgccga aagacatgat cgaacatgtc gatgcatgtc actcagcacg ttctcagatc 361 tttggatgcc aggatgctgt atataacgtg gaccattctc cctttgtctt tccggtatca 421 tttaaaacat tcgaaaacaa cctcaacagg atggtggtat tcgatatgat cggcaagggc 481 ttagaggatt tgctgatgct agcggccaat gatgcgtatc gctaccaaac tcttcaggag 541 ttttttttcc gcttttatgt gcaacctgaa aagcgaccta ctatcaaaat cttcaaggaa 601 gaagtcccca acatcctttt cgccaagttg ctcgaatctg cgagactgca tgaggaaaag 661 gcaaccagga ctaatgcgga aaatgccacc attaaggctc ttcaaagcca ttccattatc 721 acctttgagg tgttcagcga gaatttgtta aacctaccgg agattgtgga gcaaatgagg 781 cagcgggacg agaactatgt gcgcaagaac ttcgaccagt gcgcctttga cttctacctg 841 gcgttctata taacaccaga gattcgaaag aagtacaaat gcgagctgct ccccagcaac 901 gaaaacatgg aggagcaaat gctggccatt cccggcaaaa agatggccaa agagctgcgg 961 caaagtcttc cgcagttggc cactccatcg ccagcacttg taatgcccag gaagagggct 1021 ccgaaaaggt ctgcagaagg aagtcccata ccattcaaag tcttccgacg tcatgtgagc 1081 aatctcgaaa atattgctaa tcagatgctg ctgtgcgacg agtacagggg aaaatccaag 1141 gaggaagcta ttcgggagta ctacaagggt ttctattccg gaccagagat gcgccagaag 1201 ttcccgtgcc gttttaagcc ttgtcccgcc aagaagctac accatttgct tagttttccg 1261 cccgaggagc ccacaagtga gtttgcccat tttaggagtg taagccagcc gcaagttgag 1321 ccaaagaaat ccgaattaaa tgctgtaaaa ccgtcgccca tttcggagat tttagattca 1381 gcttgcaaac ccaagaacga tgtagataaa tccactgatg ttatcacctc cccaaatttt 1441 aataacaact gcgttgatga taacgaaatc ctgtacctct catcgggttc ggatacagaa 1501 tacgaagaag aaccttcccc tcagatcagt ccaccaatat tcgaggaaat ggaggatatt 1561 tttcacacat atttaccaca aactccacct aatctacaaa taaccgagga aattgaggat 1621 atttcccagt catatgtccc agaaactcct attcatctgg ctcctaacat tttaccccac 1681 gagcaagtta tagacttgga tgccagccaa agtttggact gttttgcgat gcctaaacca 1741 aaagagaatg atacaaatgt cgagatactg gatcaaatgc tcaaggagaa agtaatagac 1801 ttggatgcca gccaaagttt ggactgtttt gcgatgccta aaccaaaaga gaatgataca 1861 aatgtcgcga tactggatcc aatgctcaag gatcaagtaa tagacttgaa tgccagccaa 1921 agtttggact gttttgcgat gcctaaacca aaagagaatg atacaaatgt cgcgatactg 1981 gatccaatgc tcaaggatca agtaataaac ttgaatgcca gccaaagttt ggactgtttt 2041 gccatgccta aaccaaaaga gaatgatact agtgtcgcga tactggatcc aatgctaaag 2101 aaacccatag actgggaaag ctcgtctgct ccagaattgc catacaatat aattaagatt 2161 tccgtgatcc ctggaaaaag gagcgcagcc agccaagatt cggctagcaa gagagttaaa 2221 ctggttaacg aaaagcagtc gatggatgta actgatatca cttcgccgca gcctgaggtt 2281 aacatcactc cctcgcagga ctttgccgct ggcgattcgc ttctggaatg ctcccaactt 2341 cagcgactgc tagattcacc gagcttcaaa gtccggtgca tttactaaac aaaaaacaca 2401 taattaccac aaatgaaata actttgaagc ggcgcacaga tattgcgaat aattaaatat 2461 ggccaagact cgacgggttt gtgtgtccgt aagcgtaaac ttagatcccc ttactactgt 2521 gtaaatacca gaaaataaat ccacaagaat aatacaacaa cagcaaaaaa cgcacgatgt 2581 acttattcag aagcggattc aaattgcagt aatgacaaac cgtgaaataa taaataataa 2641 gcaacgttgt caacactcga aagtgcacag atgattcgcc aaaacaaaac gaaaacaata 2701 caataaaaaa ataagaataa aaaacataaa caaagtgaat aaatgcaaat taagaccaaa 2761 aaacggggct tatggtcatg taacgcgggc agcccaaaga tatcgataac gcg