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LOCUS XM_070218204 4301 bp mRNA linear INV 09-DEC-2024 X3, mRNA. ACCESSION XM_070218204 VERSION XM_070218204.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4301 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4301 /gene="tty" /note="tweety; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108055908" CDS 191..2929 /gene="tty" /codon_start=1 /product="protein tweety isoform X3" /protein_id="XP_070074305.1" /db_xref="GeneID:108055908" /translation="MTRCCDRKPRPAHSITSLKVALSIVTVMCCAAIGLGLYGNDDLH NGLLEVLTAGRKVDNLVTTIRNQTHILENTLTNRIRPQLVELADIFDQPVSNQTALSK LFVSLNIVQGNVTLATNAASDIRRPLMGISMTHFLTRGDQWELIRWPGTVATLALLLV LCAVLLVGVARHSRCALILFSVCGLLAVTGSWLMSGLYLSSSVAVGDLCISPADFLVS TAPRDLPTNVLLHYTQCEPGHTNPFTQRLRESQNSLNNARSAMATVMKISLVLFKSSG LQPKLGAVNADLNSSERLLTQLTALVDCKAVHHNFLAAARGLCEGGLLGLVLMLIASF IAAILLTIMVWVDSHTWIYIRKRNDYAQVDEPSYISHPAPQNHQQMMNAARTLPRNHN GHFSPPVISGSHTLQHPSKRQQHEMMAHAHIQQNMRAMGTHTLGRLPSHNHSPTHMTG PNNAAAVAAAANAAANMPPTTQAAQQQQQQQQQQQQQQQQQQQQQLGGPQPIYCHHPH QHPHPHPHPHQHPHSHSAAAVAAAVQHQHAIYHQQQQQAAQQQQQQYGTYTTAAHHGP HHLGPGQSQIYQQIPAHLAPQLAAAAANGNPHSIYQPLVAVSQGSIYVSNLATMRRQN SQGGPQIPAHQHPPSLHQQQQQQPPPPSQQQQQLHQLKSPQQHQPHMQQQHQQQQQQH HQQQQQHHQQQQQQQNESDVIPISTAMDGAIYDRDKQIYKCSTLRQGGKFDPKYKPSI LNCPLPEIPKDAEQPKVESIYEQRQQAHHQNYSKTLQRPPMKLPPQMKAIPPPRIGTP TSPPPPVAQSLSEANGGVPSGLQNGGGGGGGGNANEDTSLPPPPLEAQPEATKGRMGP GGPGGPAANGKVLHNGGGGGGGGGVGGGGGAVDDDDDLPPPPPAITDESNYAVTEL" misc_feature 191..1267 /gene="tty" /note="N-terminal domain of the protein encoded by the Drosophila tweety gene and related proteins, a family of chloride ion channels; Region: Tweety_N; cd07912" /db_xref="CDD:143653" misc_feature order(1103..1105,1112..1114) /gene="tty" /note="putative pore region [active]" /db_xref="CDD:143653" ORIGIN 1 aatttatttt atttatcaaa atcaaattac tattaccatt tactttactg gtttataaaa 61 ggaaaaacta cttataggac atatgaagta ttaatatatt atgataaaag tataagaaag 121 tctgggcatt ttgggctccg ttccggccgc cctgctgatc gtctcgctgc tgggactgct 181 cttctatctg atgacccgct gctgcgaccg gaagccccgc ccggcccact cgatcaccag 241 cctgaaggtg gccctctcca tcgtgacggt catgtgctgt gcggccatcg gactcgggct 301 atatggcaac gatgatctgc acaacggact gctcgaggtg ctgacggcgg gcaggaaggt 361 ggacaatctg gtcacgacca tacgcaatca gacgcacatc ctggagaaca cgctaacgaa 421 tcgcattcga ccgcagctgg tggagctggc ggatatcttc gatcagcccg tctcgaatca 481 aacggccctc tccaagctct tcgtttcgct caatattgtc cagggaaatg ttacgctagc 541 cacgaatgcg gccagcgata tccgacgacc cctgatgggc atctccatga cgcacttttt 601 gacgcgcggc gatcaatggg aactgatccg ctggccaggc acggtggcca ccttggccct 661 gctcctcgtc ctgtgcgccg tcctgctggt gggcgtggcc cggcactcgc gctgcgccct 721 aatcctgttc agcgtctgcg gcctgctggc cgtcaccggt tcgtggctga tgtccggcct 781 gtatctctcg tcctcggtgg ccgtcggcga tctgtgcatc tcgccggcgg acttcctcgt 841 ctcgacggct ccgcgtgacc tgcccaccaa tgtcctgctg cactacaccc aatgcgagcc 901 ggggcacacg aatccgttta cccagcgcct gagggaatcg cagaattcgc tgaacaatgc 961 acgcagtgcc atggccacgg tgatgaagat atccctagtg ttgtttaaat cgtcgggttt 1021 gcaacccaag ctgggtgccg tgaatgcgga tctgaatagc agcgagcggc tgttgaccca 1081 actgaccgca ctggtggact gcaaggcggt gcatcacaat ttcctggccg ccgcccgggg 1141 attgtgcgag ggcggactgc tgggattggt cctcatgctg atagccagct tcattgcggc 1201 cattctgctg acgattatgg tctgggtgga ctcgcacacg tggatctaca tcaggaagcg 1261 caatgactac gcccaggtgg atgaaccgtc gtatatctcg catccggcac cgcagaatca 1321 ccagcagatg atgaatgccg cccggacgct gccgcgaaat cataatgggc acttcagtcc 1381 gccggtgatc agcggctccc acacgctcca gcatcccagc aagcggcagc agcacgagat 1441 gatggcccac gcccacatcc agcagaacat gcgcgccatg ggcacccaca cgctgggccg 1501 gctgccgtcg cacaaccaca gccccaccca catgaccggt cccaataatg cagcagcagt 1561 cgcagcagca gccaatgccg ccgccaatat gccgccgacc acgcaggccg cccagcagca 1621 acaacagcag cagcagcagc agcaacagca gcaacagcag cagcagcaac agcaattggg 1681 aggaccacag cccatctatt gccatcatcc gcaccagcat ccgcatcccc atccccatcc 1741 gcaccagcat ccgcactcgc attcggccgc cgccgttgcg gctgcagtgc agcatcagca 1801 cgcgatctac catcagcagc agcagcaggc ggcgcagcag cagcagcagc aatatggcac 1861 ctacacgacg gccgcccatc atggtccgca tcatttgggg ccgggacaga gccagatata 1921 ccagcagata ccggcccatt tggcgccaca actggcggcg gcggcggcca atgggaatcc 1981 gcactccatc taccagccgc tcgttgccgt cagccagggc tccatctatg tatccaattt 2041 ggccacgatg cgtcgccaga atagccaggg tggtccgcag ataccggcgc atcagcatcc 2101 acccagtttg catcagcagc agcagcagca gccaccgccg ccttcgcagc agcaacagca 2161 gttgcatcag ctaaagtcac cgcagcaaca tcagccacat atgcagcagc aacaccagca 2221 acagcagcag caacatcacc agcagcaaca gcaacatcac cagcagcagc agcaacagca 2281 aaacgaatcg gatgtcatac ccattagcac ggccatggat ggggccattt atgatcggga 2341 caagcagata tacaagtgct ccactctgcg gcagggcggc aagttcgatc ccaagtacaa 2401 gccatcgata ctcaattgtc cgctgccgga gatccccaag gatgcggagc agcccaaggt 2461 ggagtccatc tacgagcagc gccagcaggc ccaccaccag aactactcca agactctgca 2521 gcgtccgccg atgaaattgc cgccgcagat gaaggcgatt ccgccgccgc gcattggaac 2581 gcccacatcg ccgccaccgc cggtcgccca gtcgctgagc gaggccaatg gaggagtacc 2641 ctcgggcctc cagaatggcg gaggcggagg aggaggagga aacgccaacg aggacacctc 2701 gctgccgccg ccgccgctgg aggcgcagcc ggaggcgaca aagggtcgaa tggggcccgg 2761 aggaccagga ggacccgcag ccaatggcaa ggtcctgcac aacggaggcg gaggaggagg 2821 tggcggaggt gttgggggcg gcggaggagc ggtggacgat gatgatgatc tgccgccgcc 2881 gccgccagcg ataaccgacg aaagcaacta tgcggttacg gagctgtaag atggataata 2941 tccggaaaaa ccgaagaaaa ataccagaaa aacaggcgga aaaaaaaaac aagacaggaa 3001 ttggtcagga cttgggatta gcggggcgtc ttcctagaat tcgaatgtag gatagatata 3061 tatcgaggaa accaggcgga atgggactaa ggattgctgg agcggcgagt gttccttctt 3121 gatttgttgc atttaacgta tcgtatcgta tcgtaatcgt atcctagacc ggaatcctgc 3181 ttttcgactt ttgtacatac tatatacact gaactctata tccgagcaac ccaaaaaaaa 3241 agagaaggga tgcagcgggt ataaacacac agatactaga cacgcacaga cagacagacg 3301 gaaggacata tgtaacatat atcagcgatc tattacttat atataaatat atatatatat 3361 atatccattt aggacacggt tattcctttt tgataatagc atatttttac caattttaat 3421 gcgctaaatt gtcaagaaga aacaatttta tgggggctaa cttatttgta ttatacaaca 3481 ttaatctata aaaagtatat atataaattg tatatcctct acaaccgcaa aaacggaaaa 3541 caaaaacgaa aaaacgatac catactggaa acgaaagacc gacacttgaa cctaaaaacc 3601 aacaaccacc aaaaataatg aaaatcgaat tcggatcgta ggccataagt ttcagaatcg 3661 aactgtagta gaaacgttag caaagatttt taggcacatg tcgggagtca attttatgta 3721 gacaacgggc aactgaatgg atgggcgaag gggcgtggca ggttctaatt tggttcatgg 3781 atatttctta cttataaaca gggttgctct gaaacggttt gctccattaa aaatattttt 3841 atcgattttc gaactcgaat tttcgaattt atcataatta ccttttcttc agctttcctt 3901 tatagtttaa ttttttttct ttgtaatttc tgcatatgtg atatatattc caaactctag 3961 tcattccaat tttcgagata ttttacattg tatgctcaag ttacagaggt ttttaataat 4021 tattctttat aatcatcatt tgcttacaac acttttaaag gcctaagttc ctgactgatt 4081 gcatttatac ctactcctaa aataaatgtt tacaaaatcg aataatatta atggcggcga 4141 tgaggagcca ttccttattt tatgttataa gaaaatcgaa ccgatatgac ctcgagtatg 4201 ccaaacttac attagttaat ggacgattat tttttaagca ctccaaagac acgtactgct 4261 attgttaaga ccccctcatc aaagaaaatg gaataggatc a