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LOCUS XM_070218203 4309 bp mRNA linear INV 09-DEC-2024 X2, mRNA. ACCESSION XM_070218203 VERSION XM_070218203.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4309 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4309 /gene="tty" /note="tweety; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108055908" CDS 1..2937 /gene="tty" /codon_start=1 /product="protein tweety isoform X2" /protein_id="XP_070074304.1" /db_xref="GeneID:108055908" /translation="MGDYHEFTDQYKVPVIAKLLHALPHYNITFHKINSTFRPNDEIY LESLGILGSVPAALLIVSLLGLLFYLMTRCCDRKPRPAHSITSLKVALSIVTVMCCAA IGLGLYGNDDLHNGLLEVLTAGRKVDNLVTTIRNQTHILENTLTNRIRPQLVELADIF DQPVSNQTALSKLFVSLNIVQGNVTLATNAASDIRRPLMGISMTHFLTRGDQWELIRW PGTVATLALLLVLCAVLLVGVARHSRCALILFSVCGLLAVTGSWLMSGLYLSSSVAVG DLCISPADFLVSTAPRDLPTNVLLHYTQCEPGHTNPFTQRLRESQNSLNNARSAMATV MKISLVLFKSSGLQPKLGAVNADLNSSERLLTQLTALVDCKAVHHNFLAAARGLCEGG LLGLVLMLIASFIAAILLTIMVWVDSHTWIYIRKRNDYAQVDEPSYISHPAPQNHQQM MNAARTLPRNHNGHFSPPVISGSHTLQHPSKRQQHEMMAHAHIQQNMRAMGTHTLGRL PSHNHSPTHMTAAAVAAAANAAANMPPTTQAAQQQQQQQQQQQQQQQQQQQQQLGGPQ PIYCHHPHQHPHPHPHPHQHPHSHSAAAVAAAVQHQHAIYHQQQQQAAQQQQQQYGTY TTAAHHGPHHLGPGQSQIYQQIPAHLAPQLAAAAANGNPHSIYQPLVAVSQGSIYVSN LATMRRQNSQGGPQIPAHQHPPSLHQQQQQQPPPPSQQQQQLHQLKSPQQHQPHMQQQ HQQQQQQHHQQQQQHHQQQQQQQNESDVIPISTAMDGAIYDRDKQIYKCSTLRQGGKF DPKYKPSILNCPLPEIPKDAEQPKVESIYEQRQQAHHQNYSKTLQRPPMKLPPQMKAI PPPRIGTPTSPPPPVAQSLSEANGGVPSGLQNGGGGGGGGNANEDTSLPPPPLEAQPE ATKGRMGPGGPGGPAANGKVLHNGGGGGGGGGVGGGGGAVDDDDDLPPPPPAITDESN YAVTEL" misc_feature 28..1287 /gene="tty" /note="N-terminal domain of the protein encoded by the Drosophila tweety gene and related proteins, a family of chloride ion channels; Region: Tweety_N; cd07912" /db_xref="CDD:143653" misc_feature order(1123..1125,1132..1134) /gene="tty" /note="putative pore region [active]" /db_xref="CDD:143653" ORIGIN 1 atgggcgact atcacgagtt cacggaccag tacaaggtgc cggtgatagc gaagctactc 61 cacgccctgc cccactacaa catcacgttc cacaagatca acagcacgtt ccggcccaac 121 gatgagatct acctggagag tctgggcatt ttgggctccg ttccggccgc cctgctgatc 181 gtctcgctgc tgggactgct cttctatctg atgacccgct gctgcgaccg gaagccccgc 241 ccggcccact cgatcaccag cctgaaggtg gccctctcca tcgtgacggt catgtgctgt 301 gcggccatcg gactcgggct atatggcaac gatgatctgc acaacggact gctcgaggtg 361 ctgacggcgg gcaggaaggt ggacaatctg gtcacgacca tacgcaatca gacgcacatc 421 ctggagaaca cgctaacgaa tcgcattcga ccgcagctgg tggagctggc ggatatcttc 481 gatcagcccg tctcgaatca aacggccctc tccaagctct tcgtttcgct caatattgtc 541 cagggaaatg ttacgctagc cacgaatgcg gccagcgata tccgacgacc cctgatgggc 601 atctccatga cgcacttttt gacgcgcggc gatcaatggg aactgatccg ctggccaggc 661 acggtggcca ccttggccct gctcctcgtc ctgtgcgccg tcctgctggt gggcgtggcc 721 cggcactcgc gctgcgccct aatcctgttc agcgtctgcg gcctgctggc cgtcaccggt 781 tcgtggctga tgtccggcct gtatctctcg tcctcggtgg ccgtcggcga tctgtgcatc 841 tcgccggcgg acttcctcgt ctcgacggct ccgcgtgacc tgcccaccaa tgtcctgctg 901 cactacaccc aatgcgagcc ggggcacacg aatccgttta cccagcgcct gagggaatcg 961 cagaattcgc tgaacaatgc acgcagtgcc atggccacgg tgatgaagat atccctagtg 1021 ttgtttaaat cgtcgggttt gcaacccaag ctgggtgccg tgaatgcgga tctgaatagc 1081 agcgagcggc tgttgaccca actgaccgca ctggtggact gcaaggcggt gcatcacaat 1141 ttcctggccg ccgcccgggg attgtgcgag ggcggactgc tgggattggt cctcatgctg 1201 atagccagct tcattgcggc cattctgctg acgattatgg tctgggtgga ctcgcacacg 1261 tggatctaca tcaggaagcg caatgactac gcccaggtgg atgaaccgtc gtatatctcg 1321 catccggcac cgcagaatca ccagcagatg atgaatgccg cccggacgct gccgcgaaat 1381 cataatgggc acttcagtcc gccggtgatc agcggctccc acacgctcca gcatcccagc 1441 aagcggcagc agcacgagat gatggcccac gcccacatcc agcagaacat gcgcgccatg 1501 ggcacccaca cgctgggccg gctgccgtcg cacaaccaca gccccaccca catgaccgca 1561 gcagcagtcg cagcagcagc caatgccgcc gccaatatgc cgccgaccac gcaggccgcc 1621 cagcagcaac aacagcagca gcagcagcag caacagcagc aacagcagca gcagcaacag 1681 caattgggag gaccacagcc catctattgc catcatccgc accagcatcc gcatccccat 1741 ccccatccgc accagcatcc gcactcgcat tcggccgccg ccgttgcggc tgcagtgcag 1801 catcagcacg cgatctacca tcagcagcag cagcaggcgg cgcagcagca gcagcagcaa 1861 tatggcacct acacgacggc cgcccatcat ggtccgcatc atttggggcc gggacagagc 1921 cagatatacc agcagatacc ggcccatttg gcgccacaac tggcggcggc ggcggccaat 1981 gggaatccgc actccatcta ccagccgctc gttgccgtca gccagggctc catctatgta 2041 tccaatttgg ccacgatgcg tcgccagaat agccagggtg gtccgcagat accggcgcat 2101 cagcatccac ccagtttgca tcagcagcag cagcagcagc caccgccgcc ttcgcagcag 2161 caacagcagt tgcatcagct aaagtcaccg cagcaacatc agccacatat gcagcagcaa 2221 caccagcaac agcagcagca acatcaccag cagcaacagc aacatcacca gcagcagcag 2281 caacagcaaa acgaatcgga tgtcataccc attagcacgg ccatggatgg ggccatttat 2341 gatcgggaca agcagatata caagtgctcc actctgcggc agggcggcaa gttcgatccc 2401 aagtacaagc catcgatact caattgtccg ctgccggaga tccccaagga tgcggagcag 2461 cccaaggtgg agtccatcta cgagcagcgc cagcaggccc accaccagaa ctactccaag 2521 actctgcagc gtccgccgat gaaattgccg ccgcagatga aggcgattcc gccgccgcgc 2581 attggaacgc ccacatcgcc gccaccgccg gtcgcccagt cgctgagcga ggccaatgga 2641 ggagtaccct cgggcctcca gaatggcgga ggcggaggag gaggaggaaa cgccaacgag 2701 gacacctcgc tgccgccgcc gccgctggag gcgcagccgg aggcgacaaa gggtcgaatg 2761 gggcccggag gaccaggagg acccgcagcc aatggcaagg tcctgcacaa cggaggcgga 2821 ggaggaggtg gcggaggtgt tgggggcggc ggaggagcgg tggacgatga tgatgatctg 2881 ccgccgccgc cgccagcgat aaccgacgaa agcaactatg cggttacgga gctgtaagat 2941 ggataatatc cggaaaaacc gaagaaaaat accagaaaaa caggcggaaa aaaaaaacaa 3001 gacaggaatt ggtcaggact tgggattagc ggggcgtctt cctagaattc gaatgtagga 3061 tagatatata tcgaggaaac caggcggaat gggactaagg attgctggag cggcgagtgt 3121 tccttcttga tttgttgcat ttaacgtatc gtatcgtatc gtaatcgtat cctagaccgg 3181 aatcctgctt ttcgactttt gtacatacta tatacactga actctatatc cgagcaaccc 3241 aaaaaaaaag agaagggatg cagcgggtat aaacacacag atactagaca cgcacagaca 3301 gacagacgga aggacatatg taacatatat cagcgatcta ttacttatat ataaatatat 3361 atatatatat atccatttag gacacggtta ttcctttttg ataatagcat atttttacca 3421 attttaatgc gctaaattgt caagaagaaa caattttatg ggggctaact tatttgtatt 3481 atacaacatt aatctataaa aagtatatat ataaattgta tatcctctac aaccgcaaaa 3541 acggaaaaca aaaacgaaaa aacgatacca tactggaaac gaaagaccga cacttgaacc 3601 taaaaaccaa caaccaccaa aaataatgaa aatcgaattc ggatcgtagg ccataagttt 3661 cagaatcgaa ctgtagtaga aacgttagca aagattttta ggcacatgtc gggagtcaat 3721 tttatgtaga caacgggcaa ctgaatggat gggcgaaggg gcgtggcagg ttctaatttg 3781 gttcatggat atttcttact tataaacagg gttgctctga aacggtttgc tccattaaaa 3841 atatttttat cgattttcga actcgaattt tcgaatttat cataattacc ttttcttcag 3901 ctttccttta tagtttaatt ttttttcttt gtaatttctg catatgtgat atatattcca 3961 aactctagtc attccaattt tcgagatatt ttacattgta tgctcaagtt acagaggttt 4021 ttaataatta ttctttataa tcatcatttg cttacaacac ttttaaaggc ctaagttcct 4081 gactgattgc atttatacct actcctaaaa taaatgttta caaaatcgaa taatattaat 4141 ggcggcgatg aggagccatt ccttatttta tgttataaga aaatcgaacc gatatgacct 4201 cgagtatgcc aaacttacat tagttaatgg acgattattt tttaagcact ccaaagacac 4261 gtactgctat tgttaagacc ccctcatcaa agaaaatgga ataggatca