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LOCUS XM_070218193 4631 bp mRNA linear INV 09-DEC-2024 (Hmt4-20), transcript variant X2, mRNA. ACCESSION XM_070218193 VERSION XM_070218193.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4631 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4631 /gene="Hmt4-20" /note="Histone methyltransferase 4-20; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108055810" CDS 154..4038 /gene="Hmt4-20" /codon_start=1 /product="histone-lysine N-methyltransferase Suv4-20 isoform X1" /protein_id="XP_070074294.1" /db_xref="GeneID:108055810" /translation="MVVGSNHTRRGETGSRFTNSSSSSGSNGGGSTASASSTTSATSS LATNSNSTSTATAAAALLSSMSHKGHGPPPSAPPSAHHQANQHHHDPHTPHYQQANQH PSSHHHQSNGSGGGGGASSGSVVSGLNGCNGSAVSRLSQSTGMSPRELSENDDLATSL ILDPHLGFQTHKMNIRFRPLKVDTQQLKAIVDDFIHTQNYDVAIQRIYDGPWIPRHLK NKNKIATKRLHDHIVRYLRVFDKDSGFAIEACYRYSLEEQRGAKISSTKRWSKNDKIE CLVGCIAELTEAEEAALLHSGKNDFSVMYSCRKNCAQLWLGPAAYINHDCRANCKFLA TGRDTACVKVLRDIEVGEEITCFYGEDFFGDSNRYCECETCERRGTGAFAGKDDGLML GLSMGLGLTTNGPGNNAGGYRLRETDNRINRIKSRANSTNSTSNSNSNTNDSTGTSES SSTNGLAVVSGGGAAAGGASVPAVPSQPSAGGSKELTVTAPVSLLEKKLPNVVVSPLT MKELRQKGMTKYDAEMIMANAAYQQQHHHQHHFHHHHHHHHHHHNHGQHASTGAEATA AVQQLAAMQKPGGAGGSVAGTGGGTAVAGGAGSEVNGNRSSSLRKSMRVNSTSSSIST ASTDEAVPVVVATSIPLPTKAPVVLVPRCKPAQMAIAAMQQRQQRQLRRSERQKEKLT DGESSDTSSDQQQKREQNQHQLAEEEQAHPVEKQEQQQEKRVTRNSAGRGGGGALVAR LATAHNNNIATTTTTNSSSSSKATTTITNCNNHNCNNSSRINHNSNLSGRLSVKSKKP APSEASSTPSSTSTSTENQQNQQQQQATRRSQSPAYKKNLLASFDPDLDQQKKAENEG PTPPVVKQKRSRRAAALAAAQSIHCEALGGFSTGSGGGGQRKRATQAAAGEATATSTI SNVEPLLKTPERRLKLTLRMKRSPILDEVIELGTSLSNGGRNASSSHRGGGLGGGGAG AAGEGAALNLTNSSSNGIEYEILRMEGISEHGNDDEEDEEEDDEQEEQEEDEEPEEEE PPPPPLKEEQQLLPSKKQRKKQRSRSRSSQRRSPAPSSSSVYGTPQKKRLRLIFGNES HTIDIPPAAGGAAEGEDLNSSGGGGDESFNVSYASSTSLTVNTSSSSTNSSSGGGGTG GEAVDSSSTVGATTIAAQSPSSTTSSSFQSACTSTTNSNSYFPNGKQGEDSYAMHYYQ LGKFSGTSSPGQGQAIVSSSSGGGGGGGAAAGFMSMPKHTFGTCALLAPTSFASLQNQ PPGISQQKGVVTTSTATSNAPNHHHNNHHGQK" misc_feature 877..1302 /gene="Hmt4-20" /note="SET domain (including post-SET domain) found in Drosophila melanogaster suppressor of variegation 4-20 (Suv4-20) and similar proteins; Region: SET_Suv4-20; cd19186" /db_xref="CDD:380963" misc_feature order(910..912,916..921,931..936,1054..1059,1111..1125, 1225..1227,1261..1269) /gene="Hmt4-20" /note="putative SAM binding site; other site" /db_xref="CDD:380963" misc_feature order(910..912,919..921,931..936,1021..1023,1051..1077, 1087..1089,1096..1098,1108..1125,1147..1149,1153..1155, 1225..1227,1234..1242,1261..1269) /gene="Hmt4-20" /note="putative active site [active]" /db_xref="CDD:380963" misc_feature order(1129..1131,1261..1263,1267..1269,1276..1278) /gene="Hmt4-20" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:380963" ORIGIN 1 caaatattca tttcccattt ccagccatgt ttcccagcac cacccacttg tgtttatgtt 61 agtttattta atggtccagc aagaaaagca gtttgccgtt tcgcctaccg cgcagcttca 121 agaaaatgct aaattaaaaa actgtcctgc agaatggtcg tcggctcgaa tcacacgcgg 181 cgcggtgaaa ctggcagcag atttacaaac agcagcagct ccagtggctc aaacggcggt 241 ggttccaccg cttcggccag cagcaccacc agcgcaacgt cttcactagc caccaattcc 301 aattccacgt cgacggcgac tgcggctgcg gctctgttgt cgtccatgtc ccacaagggt 361 catggcccac cgccatccgc cccgccatct gcgcaccacc aggcgaatca gcaccaccat 421 gatcctcata ccccccacta tcagcaggcg aatcagcatc ccagcagcca ccaccatcag 481 tcgaatggca gtggaggagg aggaggagcc tcatcaggat cggtggtcag tggactcaat 541 ggctgcaacg gcagcgccgt cagccgcctc tcgcaatcca ctgggatgtc gccgcgtgaa 601 ctctccgaga acgatgacct ggccacatcg ctgatcctcg atccgcattt gggtttccag 661 acccacaaga tgaacatacg ctttcgcccc ttgaaggtgg acacgcagca gctgaaggcc 721 attgtggatg actttattca cacgcaaaac tacgatgtgg ccattcagcg gatctacgat 781 ggtccctgga taccgcgtca tctcaagaac aagaacaaga tagccaccaa gcggctgcat 841 gatcatattg tccgctacct gcgcgttttc gacaaggaca gtggctttgc gatcgaggcc 901 tgctacagat attcgctcga ggagcagcgc ggcgccaaga taagctcgac gaagcgctgg 961 tcgaagaacg acaagatcga gtgcctggtg ggctgcatag ctgagctgac ggaggccgag 1021 gaggcggccc ttttgcattc gggcaagaat gacttttccg tgatgtatag ttgccgcaaa 1081 aattgcgccc aattgtggct gggaccggct gcctacatta atcacgattg tcgcgccaac 1141 tgcaagtttc tggccaccgg cagggatacg gcatgcgtga aagtcttgcg cgacatcgag 1201 gtgggcgagg agataacctg tttctatggc gaggactttt tcggcgactc gaatcgctat 1261 tgcgagtgcg agacatgcga acgccgcggc acaggcgcct ttgcgggaaa ggatgatggt 1321 ctaatgttgg gtcttagcat gggattaggc ctaaccacca atggaccggg caacaatgcc 1381 ggtggctatc ggctgcgcga gacggacaat cggataaatc gcatcaagag ccgggccaat 1441 tcgacgaaca gcacgtcgaa cagtaatagc aatacaaacg attccactgg caccagcgag 1501 agtagcagca caaatggatt ggcggtggtt tctggaggag gagcagctgc aggaggagct 1561 tctgtgcctg cagtgccatc acagccatca gctggcggaa gcaaggagct cactgtaact 1621 gcacccgttt cgctgctcga aaagaaacta ccgaatgttg tcgtctcccc gctgaccatg 1681 aaggagctgc gccaaaaggg catgaccaag tacgatgccg agatgataat ggccaatgca 1741 gcctaccagc agcagcacca tcatcagcat catttccatc accaccatca tcatcatcac 1801 catcaccaca atcatggcca gcatgcgagt acaggagccg aggccacagc ggctgttcag 1861 caattggcag ccatgcaaaa gccaggagga gcaggaggat cagtagcagg aacaggagga 1921 ggaacagcag tggccggcgg agcgggctcc gaggttaatg gcaatcgctc cagcagtctg 1981 cgcaaatcga tgcgtgtgaa tagcaccagc agcagcatct ccacagcctc cacggatgag 2041 gcggtgcccg tggtggtggc cactagtatt ccgctgccca ccaaggcgcc tgttgtcctg 2101 gtgccacgtt gcaagcccgc ccagatggcc attgccgcca tgcaacagcg acagcagcgc 2161 cagctgagac gcagtgaacg ccagaaggag aagctcacgg atggcgagag cagcgacacc 2221 agcagcgatc agcagcagaa gagggagcag aatcagcatc agttggcgga ggaggagcag 2281 gcacatccgg tggagaagca ggagcagcag caggagaagc gtgtgacgcg aaatagtgcg 2341 ggaagaggag gaggaggagc attggtagcc agattagcca ctgcccataa caataacatt 2401 gcaaccacaa caacaacaaa cagcagcagc agcagcaaag caaccacaac gattacaaat 2461 tgtaataatc ataattgtaa taatagcagt agaattaatc ataattctaa tcttagcggt 2521 agacttagtg ttaaatcgaa gaagccagca ccaagtgagg cctcgtccac accctcatcc 2581 acatccacat ccacagaaaa tcagcaaaat cagcaacagc agcaggcaac gcgtcgcagc 2641 cagagtcccg cctacaagaa gaaccttttg gccagcttcg atcccgattt ggatcagcaa 2701 aagaaagcag aaaacgaagg acccacaccg ccggtggtca aacagaagcg aagtcgcagg 2761 gcagccgcct tggcagcggc gcagagcatc cattgcgagg ctctcggcgg attctcaacg 2821 ggttccgggg gcggcgggca gcgcaagagg gcaacgcagg cggcggcagg agaagctaca 2881 gccacctcaa ccatcagtaa tgtggaaccc ctgctaaaga caccagagcg ccgattaaag 2941 ctaacgctgc gcatgaaacg ttcacccatc ctcgacgaag ttattgagct cggcacgagt 3001 ctaagcaacg gcggccgcaa tgcctcttcc tctcatcgcg gaggaggatt aggaggcgga 3061 ggagctggag cagcaggaga gggagctgcg ctaaatctca ccaacagcag ttcgaatggc 3121 attgagtacg agattctgcg catggagggc atttccgagc atggcaacga tgatgaggag 3181 gatgaggagg aagacgatga gcaggaggag caggaagaag atgaagagcc agaggaggag 3241 gagccaccac cgccgcctct aaaagaagag caacagctgc tgcccagcaa gaagcagcga 3301 aagaaacagc gcagccgtag caggagcagc caacgcagat cgccggcgcc gagcagcagt 3361 agtgtatatg gcacgccgca aaagaagcga ctacgcttga tctttggcaa tgaatcccac 3421 accatagaca ttccaccagc agcaggagga gcagcagagg gagaggactt gaacagcagc 3481 ggaggaggtg gtgatgagtc cttcaatgtc tcgtatgcca gcagcaccag tttgacggtg 3541 aatacctcct ccagcagtac aaatagttca tcaggaggag gaggaaccgg aggagaggca 3601 gtggactcct cctccacagt gggtgccact acgattgcag cccaatcacc ctcatccacg 3661 accagcagct cctttcaatc ggcctgcaca tcgacgacga acagcaatag ctattttccg 3721 aatggcaagc aaggcgagga ttcgtatgcg atgcactact atcagctggg caagttttcc 3781 gggacctcga gtcctggcca aggacaggcc attgtgagca gcagcagtgg aggaggagga 3841 ggaggaggag cagctgctgg attcatgagc atgcccaagc acactttcgg cacctgcgct 3901 ctcctggcgc ccacaagttt tgctagtttg cagaaccagc cgccggggat tagccagcaa 3961 aagggagtgg taaccacatc cacagccact tcgaatgcgc cgaatcatca tcataacaac 4021 catcatggcc agaaataacc aacgactgat ctccaagcaa attgactaag cacagctgcc 4081 attgccaaga gaagaggatg agaaaccagg aggagaaacc aggagaatat ggaaggatcg 4141 ctgcgctgct ggcgtcgttg cctctgctgc tgctgctgat gatcctgtga aacaacacac 4201 acacttccca tagaagaacc ctagtttaag atcttagtcc aagtagatcc tttttcctat 4261 atacccatat atatattcag gaagctaact agaaaacagg ctgacaaatc gaatccggat 4321 atatatatat atacctgatt ataaattgat ttttttttcg ctttcttttt ctatttctct 4381 cttttttctc tttgtgattg ctccccccgt ttttctctac atttttattt tgtgttcgcg 4441 ttgcatgttg tgcgtgtgtg ttgtgtgttg tttggtgtgc ttttcttttt gcaggtggaa 4501 atttaaggct taggagtagg aaaaggtcgg aaaagtgcga cggcagccag aggaggaaca 4561 gcagcagcag cagcaacgcc accagcaaaa cgaacagcag cagcggcagc agcaacatct 4621 tcagcggcaa c