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LOCUS XM_070218188 4787 bp mRNA linear INV 09-DEC-2024 transcript variant X2, mRNA. ACCESSION XM_070218188 VERSION XM_070218188.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4787 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4787 /gene="mew" /note="multiple edematous wings; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108069576" CDS 358..3531 /gene="mew" /codon_start=1 /product="integrin alpha-PS1 isoform X2" /protein_id="XP_070074289.1" /db_xref="GeneID:108069576" /translation="MTQSFDDCEQVITDGRRSNGTYETQFNKTFDSEILSPPGNDEIK EDQWMGVTVRSSPLQANGSGGKVVVCAHRYMYIVRENRYGQGLCYLLTNDLQFEEVHE PCKGRPVQRQHEDYGLCQAGTSAALLDDDTMVLGSPGPYTWRGSIWVTQVGGEYLQRD KTTYYSDHSDTSSKVKKYSYLGMSVTGGRFFGQMSYAAGAPRSQGHGQVLIFDKSTNN PIPVHLTLDGEQFGSSFGYELATADVNGDHRPDLIVAAPLYFTKTEGGAVYVYQNDRD TLPLKHTLKLTGSLESRFGLALANIGDLNKDNCEDLAVGAPYEGNGVVYIYLGSRQGL NSKPAQKIQASELGGTMPTGQPPIRTFGISISGNTDLDDNSYPDVVIGAFNSSAAVIL LARPIISIQTNVKRDELRNMDPNKPGCLADRGSNLTCFTFEACCSIDPYDERSKELQL SYSVETETFDQLKKFSRVFFDRDNKRSNVLSRDVRVQTDGRMHCQAITGYIKANTRDI QTPVRFRLKYSLVEPPLADSALTRLNPILDQTQAHIDFEGTFQKDCGDDDLCESNLVI RAEPNITQSSANEYTLILDETELEVRINVTNLADSAYEAQLFIVHQAGVSYVATKKPT NATCNSYNTTMVACSLGNPMLRGTTTFVTIRFQPKGLEPSEKSMLFHIFANTTSKLVG RERPERDLLVNVLRRAKLNFRGWAIPEQSFYSGSSVATSAVSTTEVADVEGHGPMGMD DVGSQVHHMYTIFNEGPSTAPKVKMVIHWPYSLYSDPQSGRPVQYLLYLEQVPTVEVS QGECHVAKEYVNPLNLASGSRESPAAFLTAPAQMRMFPTQSRHSFNKSLIHSQRSYYR EEDRSQHRNRVRRNFLERVTRLERLMYDPETSNAAGTGGKKQDIVELDCNKGATNCVR IECEILNMPALSEAQVVVKARLWNSTLVSEYPRVERVRIFSTATAQIPESYGVEVMEH NNIEVETRAYPELRNQQRDTSIPWLIIILGIVGGLLLLALFTYLLWKCGFFKRIRPTD PTLSGNLEKMNEEKPFLAPAKNSHHGI" misc_feature 1048..1200 /gene="mew" /note="Integrin alpha (beta-propellor repeats); Region: Int_alpha; smart00191" /db_xref="CDD:214549" misc_feature 1231..1383 /gene="mew" /note="Integrin alpha (beta-propellor repeats); Region: Int_alpha; smart00191" /db_xref="CDD:214549" misc_feature 1438..1575 /gene="mew" /note="Integrin alpha (beta-propellor repeats); Region: Int_alpha; smart00191" /db_xref="CDD:214549" misc_feature 1540..3108 /gene="mew" /note="Integrin alpha; Region: Integrin_alpha2; pfam08441" /db_xref="CDD:462478" polyA_site 4787 /gene="mew" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tttgtgatct gtatcgccgg ctttaacctg gaacagcgat tgccgatcgt gaaatatggc 61 catccgcact cgaatttcgg ctactcggtg gccacccaca caattggcga ggtcaatggg 121 cccaacaaaa caaattggta tgtaccgtgc ttaacccatt agctgcagct gtgattaatt 181 aaggcacaag accgccgagg tatctcattg tatgtaccgt gcttaaccca ttagctgcag 241 ctgtgattaa ttaaggcaca agaccgccga ggtatctcat tcgttttagt gggagctcca 301 ctggatcaaa atcgacagcc gaacacctca cattctggcg ccctctggcg gtgtcccatg 361 acacagagtt tcgacgactg cgaacaagtg atcaccgatg gcaggcgatc gaacggaaca 421 tatgagactc aatttaataa gactttcgat agcgaaatcc tctcaccgcc cggtaatgac 481 gaaatcaagg aggaccaatg gatgggcgtt acggtgcgat cgagtcccct acaagccaat 541 ggatccggtg gaaaggtggt cgtatgcgcc catcgctata tgtacatcgt tcgggagaat 601 cgctatggcc aaggtctctg ctatttactt acaaacgatc tgcagttcga agaggtccat 661 gaaccctgca aaggacgacc tgtacaaaga caacacgagg actacggact gtgccaggcg 721 ggaacatcgg cggcccttct ggacgacgac accatggtat tgggctcccc cggtccgtac 781 acgtggcgcg gatccatctg ggtgacccag gtgggcgggg agtacctgca gcgcgacaag 841 acgacctact acagtgatca ctcggacacc agctcgaagg tgaagaagta cagctacctg 901 ggcatgtcgg tgaccggtgg ccgtttcttt ggccagatgt cctatgcggc cggagctccg 961 cgctcgcagg gccacggaca ggtgttgatt ttcgacaagt ccacgaataa cccaattccg 1021 gttcacttga ccctggacgg tgagcagttc ggctcgagtt tcggctacga actggccacc 1081 gccgacgtga acggcgatca tcgaccggac ctgatagtcg ctgccccgct gtacttcacc 1141 aaaacggagg gcggagcggt gtacgtttac cagaatgacc gggacacgtt gcccctgaag 1201 catacgctca agctgacggg cagtttggag agtcgcttcg gtttggccct ggccaatatc 1261 ggggatctga acaaggacaa ctgcgaggat ctggcggtgg gagctccgta cgagggcaat 1321 ggcgtcgtct acatctactt gggctcgcga cagggactca actcgaagcc ggcccagaag 1381 atccaggcct cggagctggg cggcaccatg cccactggcc agccgccgat tcgcaccttc 1441 ggcatctcga tatcgggcaa cacggacctc gatgacaact cctatccgga tgtggtgatc 1501 ggagcgttca actcctcggc ggcggtaatt ctgctggccc gacccatcat cagcatccag 1561 acgaacgtga agcgggacga gctgcgcaac atggatccca ataaaccggg ctgcctcgcc 1621 gatcgcggca gcaatctcac ctgcttcacc ttcgaggcct gctgcagcat cgatccgtac 1681 gacgagcgga gcaaggagct ccagttgtcg tacagcgtcg agacggagac cttcgatcag 1741 ctgaagaagt tctcgcgcgt cttcttcgat cgggacaaca agcggagcaa cgtgctcagt 1801 cgcgatgtga gggtgcagac ggatggaagg atgcactgcc aggcgattac gggctacatc 1861 aaggcgaata cccgtgacat ccagacgccg gtgcgcttcc gattgaagta ctcgctggtg 1921 gaaccgccac tggccgactc cgccttgacg cgcctcaatc cgatattgga ccagacccag 1981 gcgcacatcg acttcgaggg caccttccag aaggactgcg gcgatgacga tctctgcgag 2041 agcaatctgg ttatccgggc ggagccgaac atcactcagt cctcggccaa cgaatacacc 2101 ttgatcctgg acgaaacgga actggaggtt cgcatcaatg tgaccaatct ggcggactcg 2161 gcctacgaag ctcagctgtt catcgttcat caggcgggag tttcctatgt ggccaccaag 2221 aagccgacga atgccacttg caacagctac aacacgacca tggtggcctg cagcctgggc 2281 aatcccatgc tgcgcggcac caccacattc gtgaccatac gcttccagcc aaagggactg 2341 gagccgagcg agaagtccat gctgttccac atctttgcca ataccacctc caagttggtg 2401 ggccgggaac gtcccgaaag ggatctcctg gtgaatgtgc tgcgtcgggc gaagctgaac 2461 ttccgtggtt gggcgatacc cgagcagagt ttctacagcg gatcgagcgt ggctacctcg 2521 gcagttagta caactgaggt ggccgatgtc gagggacacg gtcccatggg aatggacgac 2581 gtgggctcgc aggtccacca catgtacacc atcttcaacg agggaccctc gacggcgccg 2641 aaggtcaaga tggtcatcca ctggccgtac tcgctgtaca gtgacccgca gagcggtcga 2701 cccgtccagt atctgctcta tctggagcag gtgcccaccg tggaggtcag ccagggcgag 2761 tgccacgtgg ccaaggagta tgtgaatccc ctgaacttgg ccagtggctc gcgggagagt 2821 cccgccgcct tcctgactgc ccccgcccag atgcgaatgt tccccacgca gtcgcggcat 2881 tcgttcaaca agagtctgat ccactcgcag aggtcctatt atcgcgagga ggatcgttcg 2941 cagcatcgca atcgagtgcg tcgcaatttc ctggagcgag tcacccgtct ggagaggctg 3001 atgtacgatc ccgagacgag caatgcggcg ggcaccggcg gcaagaagca ggacatcgtg 3061 gagctggact gcaacaaggg ggccacgaac tgcgttcgca tcgagtgcga gatcctcaat 3121 atgcccgccc tgtccgaggc ccaggtggtg gtcaaggccc gcctgtggaa ctcgacgctg 3181 gtcagcgagt atccccgcgt ggagagggtc aggatcttct cgacggccac ggcccaaata 3241 cccgaaagct atggcgtcga ggtgatggag cacaacaaca ttgaggtgga gacgcgtgcc 3301 tatccggagc tgaggaacca gcagcgcgac acctcgatac cctggctcat catcatcctt 3361 ggcatcgtgg gcggactgct cctcctggcg ctgttcacct atctgctgtg gaagtgcggc 3421 ttcttcaagc gcatccgacc caccgatccg acgctcagcg gcaatctgga gaagatgaac 3481 gaggagaagc cctttttggc gccggcgaag aattcgcatc acggtatcta acaagagggc 3541 accgtcggct gggatttggt gcgacgtcgg aggcgtcgac gccgtctgaa gctgtcactt 3601 ccgcttccgg ttccgcaacg accacgtcat ggctggcgga aaaatgcgga aaattcgaag 3661 agtagtagta ataacaacaa caagaacaat gacagcgaaa ttgacgtgct ttcgctgacg 3721 ccgccgccgc cgccgctcag catcctcagc tggggaaacg atggctacta ccaggccagc 3781 gccgcctggt ggggtcacca catgtgatcg gagcggggtc accagtgggt catgtgggtt 3841 gtggttcaat gtgccatttc gtttacttaa tgcagcgggc taagttcagt tcagtggatg 3901 tggagaccag agggaattga catcagctaa atctattata aatgtgtaat aaaaaggaaa 3961 tgggagtatg tacttcagag ctctcggagg ggctaagttt ttaaaaagat tccacataaa 4021 acctataaaa gtctaagttt tataaataaa taactataga aatattccga gcctagatac 4081 atccatccta tgaccaaaaa ctattcgatg gtgcttttat aacctcgacg gatttagaag 4141 aagaacgaaa gaatacttaa tatttgtaaa gttttccaaa tgtgggatca taaaagttta 4201 tattacgttt atagcgatac atttagctga tgtcaggtac tgagctttag tctaaagatt 4261 acctaagcac ccaaacgttg ataatctgtg taaaaatgtt cattgtcata tgtagattta 4321 ggcctaagtt aggctaagct aatgagaacg aagcgaaaat tccgaatata gcatacaaga 4381 aagaaaaaca ctgccaataa caacaaatca aaagtgcctc gaaatcgaac cgtaattcca 4441 atgtactgga cacgtcttaa acaaaataac aaaacaacaa aaaaaaacga aagtattagc 4501 acaaacataa tgcatagcta taaataatcc acaagtaact gaatttagca cacaccggca 4561 agattatctt tattttgtta attttccgct ttttttcggt caactaattt aagtggggag 4621 tttttatttt aaattgtgaa aaacaccaga gatgttagtt tttgtatgta tgtatgtgtg 4681 gggtcgagat ctagttaaat tagttgtaaa taataattcg atagtactag ctgtaaatag 4741 taattatgtt tctttatcta tttaatatac gattcctttt ttttaaa