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LOCUS XM_070218170 7680 bp mRNA linear INV 09-DEC-2024 transcript variant X4, mRNA. ACCESSION XM_070218170 VERSION XM_070218170.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7680 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7680 /gene="rut" /note="adenylate cyclase rutabaga; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins" /db_xref="GeneID:108056078" CDS 541..6948 /gene="rut" /codon_start=1 /product="Ca(2+)/calmodulin-responsive adenylate cyclase isoform X3" /protein_id="XP_070074271.1" /db_xref="GeneID:108056078" /translation="MDHAVKATRGRPLNTLRFENDELECLYQRYTLKLQRFSVLGVVA LVFVLCGVMAALSLAFNNAATFHNIFNAIVCGLFAVVLILLQCSVIKDHHLPTLCYGI LLFTASICVVSMPTLGSVFPVDTKEVMAEGVWQIVFVVFLAYAMMPLQIWEAVAFGIA LPSVHISLTVYKIFTDALRYLEYNQLIANIVIFIGVNVAGLVVNIMMERAQRRTFLDT RNCIASRLEIQDENEKLERLLLSVLPQHVAMQMKNDILSPVAGQFHRIYIQKHENVSI LFADIVGFTVLSSQCSAQELVRLLNELFGRFDQLAHDNHCLRIKILGDCYYCVSGLPE PRKDHAKCAVEMGLDMIDAIATVVEATDVILNMRVGIHTGRVLCGVLGLRKWQFDVWS NDVTLANHMESGGEPGRVHVTRATLDSLSGEYEVEAGHGDERSSYLRDHGVDTFFIVP PPHRRKPLMLNTLGVRSAIGSRRKLSFRNVSNVVMQLLHTIKFSEPVPFSNIATGSFP SAASALGGGGVALGGGGGGAARGSTCEASAGSVQVSEKGSRKVIRLQKILHATPPPHG IGYGSVVGSGGGGDSSGISGSGSGCGSGSNSGSGGGIAAGIGGSVQVTVGTNPNSTAS TISRIHRHNHKNNKSQSKVADKFKRPFRKRHSVAAHHQPTNRVNRFLSQAINARSVDC DKSEHVDRLTLRFRQSDMEREYHKDFDLGFTTAMGCSLLLLILGAALQVTALPRTLIL LLLFLFAFIWVSAILMLLLAVRLKWIIWDISESFSLRMAITIFTVILIYSVGQVNVFT CVSDHPCSGNATSSFPNDSHRKCSLPQYVSLSAAFAFLSVSVFLRLPIIFKSLLVLGM GTIYGLFIELSHQNIFECYDNRVNASIPLHLISLARIGIFMIAILVHGRLVEGTARLD FLWQLQASQEKKEMDVLQESNKRILHNLLPAHVAAHFLDAQFRNNMELYHQSYAKVGV IFASVPNFNEFYTEMDGSDQGLECLRLLNEIIADFDELLKEDRFRGIDKIKTVGSTYM AVVGLIPEYKIQPNDPNSVRRHMTALIEYVKAMRHSLQEINSHSYNNFMLRVGINIGP VVAGVIGARKPQYDIWGNTVNVASRMDSTGVPGYSQVTQEVVDSLVGSHFEFRCRGTI KVKGKGDMVTYFLCDSGNKSLNGEVRNAMSLPQSLHAPDYYMKVAQFPENRVNSDTYS KKREENGGNFTVGGEEQQLLLQHQHKQLEPPLPLPAPPPPHHHLHQQQQQRLNSKLQK QPIFMANGGLPNIRENGNGHNGHNGEQQQPAAVAVPLQQPPTQQLQQLQQLQHHQIQF QHTPVPVQHQILLHHQHQLQLQHHNQPVPVPSVMLREFNIIENPTSGGRHPQMEQLPP SHHGSLDQSGLGMGMGMLGGGGDCFMMPRRVPALNQHGHHPTHHLHSNLNMNMNQHPP SFTSLGYGQCRESEPLLHASSIAPVAKLPPHPALQEHQQQQQELPQRQQQQQYAMYSQ QPQLPPKPAPLRTYMKPLPKLPAAELEESRDMSSTDDLSSRPHSPSMSSSDESYSKTT EGEGENDEDSRPRIPNGAVHHHHHHRNGYNNGGGLVNPLQWLYPCDIQVDPTSPVVDL HDFELSSTTESQQPKGDSCNSFDYQKATAAGGIATKSPFERELQRLLNESSRGRGLAT TATATATATTTTTDHTASNGSRNEMMMSYSFSNGKLSGAGGSGSAVGNGSGSSNGNLS GGSGSNSNSGNNNSGGHKADLQQQDPQELKLPGSSSFMIAKHPVGLEAIKEITRNKNP SESSQMQTSDTESCEILHETRNQMHMLAMLEMQTAKEQQQLRTHRQRPRSKELQYSHE SLDGLDGAAMQPRQPRFHHHHHHHHHHHQQQQQRYNHVQEQEERDDTEDNLADEEFED DEVGRDVRQKRLQKPDKTSHKRGEQEQDADDDDDDDEVDDVDQEDDEEQEQEHRNGGQ LPLTNGSSNVINDELKYGAAHLNHQSMDSNPLESQSEWSDDDCREEATGGAESTGYIT DEPGLENISLLNEAGLTDAEGALSDVNSLYNAPDVDDTSVSSRASSRLLSLDSLSGLY DCDLDSKHELAIVNASHKISSKFGQPTSPAQQQQQQLQHQHQQQTQPQIQVQFQSAEE LRE" misc_feature <589..1305 /gene="rut" /note="Adenylyl cyclase N-terminal extracellular and transmembrane region; Region: AC_N; pfam16214" /db_xref="CDD:318454" misc_feature 1336..1824 /gene="rut" /note="Adenylate and Guanylate cyclase catalytic domain; Region: Guanylate_cyc; pfam00211" /db_xref="CDD:425528" misc_feature order(1372..1374,1378..1395,1498..1500,1504..1512, 1519..1521,1705..1713,1723..1728,1735..1740) /gene="rut" /note="nucleotidyl binding site [active]" /db_xref="CDD:143636" misc_feature order(1378..1380,1510..1512) /gene="rut" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143636" misc_feature order(1393..1395,1429..1431,1438..1443,1450..1452, 1462..1464,1498..1503,1669..1671,1678..1680,1708..1719, 1726..1728) /gene="rut" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:143636" misc_feature 2434..2658 /gene="rut" /note="Adenylate cyclase, conserved domain; Region: Adcy_cons_dom; pfam06327" /db_xref="CDD:461877" misc_feature 2788..4014 /gene="rut" /note="Adenylate cyclase, class 3 [Signal transduction mechanisms]; Region: AcyC; COG2114" /db_xref="CDD:441717" misc_feature 3424..4017 /gene="rut" /note="Adenylate and Guanylate cyclase catalytic domain; Region: Guanylate_cyc; pfam00211" /db_xref="CDD:425528" misc_feature order(3460..3462,3466..3483,3607..3609,3613..3621, 3628..3630,3844..3852,3862..3867,3874..3879,3985..3987) /gene="rut" /note="nucleotidyl binding site [active]" /db_xref="CDD:143636" misc_feature order(3466..3468,3619..3621) /gene="rut" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143636" misc_feature order(3481..3483,3529..3531,3538..3543,3550..3552, 3562..3564,3607..3612,3808..3810,3817..3819,3847..3858, 3865..3867,3985..3987) /gene="rut" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:143636" polyA_site 7680 /gene="rut" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcggttcgtt tcggttcgct tcgacttgaa cggacgcgcc gcggacgctg ctttgctgag 61 aagtgagaac tgagaacaga ccaggccaac aaacaccaaa ccgaatcgaa agccaaacaa 121 accaagccaa acaaacctcg ctagccgaag aaatcgcgtc ggaaagtcaa gttgttggtg 181 gaaagccgtt ggataacgcg acgattttaa attatttttt tttcggtgcg gtgccagtgt 241 tttttttgtt gtttgttggt ttttccacaa agtttgtttt cgtttttgtc gtggaaatgc 301 gcgcgcgcat ttaagaagca gtgaaacggg gaaaactaaa aaacgcagct gcctgcaaca 361 acaacaaaag caacaacaga tacaaaacaa ggaaccaaag aagatatcga aatcgaaatc 421 aacttgcaac ttgcaacaca atcgttgttg ctttttggcc cctgaacttg gcggccccaa 481 tcctcctttt ggcaggcgtc ggaaggagcc gctcggcagc ggcagctgcg gcggcaccgc 541 atggatcatg ccgtgaaggc gacgcgcggc cgcccgctca acacgctgcg cttcgagaac 601 gacgagctgg aatgcctcta ccagcgttac acactgaagc tgcagcgctt ctcggtgctg 661 ggcgtggtgg ccttggtctt cgtcctctgc ggcgtgatgg cggccctctc gctggccttc 721 aataatgcgg ccacgtttca caacatcttc aatgcgatcg tgtgcggcct gttcgcagtg 781 gtgctgatcc tcctgcaatg ctcggtgatc aaggaccacc acctgcccac cttgtgctac 841 ggaatactgc tgttcacggc cagcatctgt gtagtatcga tgccaacgct gggcagcgtt 901 ttccccgtcg acaccaagga ggtgatggcc gagggcgtct ggcagatcgt gttcgtcgtc 961 ttcctcgcct atgcgatgat gccgctgcaa atctgggagg cggtggcctt tggcatcgcc 1021 ctgccctcgg tgcacatctc cctgacggtc tacaagatat tcacggatgc gctgcgctat 1081 ctggagtaca accagctgat cgccaatatt gtcatcttca ttggcgtgaa tgtggccggt 1141 ctggtggtga acatcatgat ggagcgagcc cagcggcgaa catttctcga tacgcgcaac 1201 tgcatcgcat cgcggctgga gatccaggac gagaacgaga agctggagcg cctgttgcta 1261 tccgtactgc cgcagcacgt ggccatgcag atgaagaacg acatcctgtc gccggtggcc 1321 ggccagttcc atcgcatcta catccagaag cacgagaacg tcagcatcct gttcgcggac 1381 atcgtcggct tcaccgtgct ctcctcgcag tgcagcgccc aggagcttgt gcgtctgctc 1441 aacgagctct tcggccgctt cgatcagctg gcccatgaca accactgttt gcgaattaaa 1501 atcctcggcg actgctatta ttgtgtctcc ggattgccag aaccgcgaaa ggatcacgcc 1561 aaatgcgccg tggaaatggg actcgatatg atcgatgcca ttgccaccgt ggtggaggcc 1621 accgacgtca tcctgaacat gcgcgtgggc atccacacgg gccgtgtgct ctgcggggtc 1681 ctgggcctcc gcaagtggca gttcgatgtg tggtcgaatg acgtgaccct ggccaatcac 1741 atggagtcgg gcggtgagcc cggccgagtg cacgtgaccc gggccaccct ggactcgctg 1801 tccggtgaat acgaggtgga ggccgggcac ggagatgagc ggtcctcgta cctacgcgac 1861 cacggcgtgg acacgttctt cattgtgccg ccaccgcatc gtcgcaagcc cctgatgctc 1921 aacactttgg gcgttcgctc ggcgatcggc agtcgacgga agctctcgtt caggaacgtt 1981 tccaatgtgg tcatgcagct gctgcacacg atcaagttct ccgaaccggt gccgttctcc 2041 aatatagcca ccggatcctt tccctcggcg gccagcgcct tgggcggcgg aggagtggca 2101 ctcggcggag gaggaggagg tgcggcacgg ggaagcacct gcgaggcgag cgccggcagc 2161 gttcaggtgt ccgagaaggg atcgcgcaag gtgatacgtc tgcaaaagat cttgcatgca 2221 acaccgccac cgcacggcat tggctatggc agcgtcgtcg gcagcggcgg cggtggtgac 2281 agcagcggta tttccggttc cggttccggt tgcggttctg gttccaattc tggttccggt 2341 ggtggtattg ccgctggcat tgggggcagt gttcaagtga ccgtaggcac caatcccaac 2401 tctacagcga gtacgattag tcgcattcat aggcacaatc acaagaacaa taaatcgcag 2461 tccaaggtgg cggacaagtt caagaggcca ttccggaagc gtcactcggt ggcggcccac 2521 catcagccca cgaatcgggt gaaccggttc ctctcgcagg cgatcaacgc gcgttcagtg 2581 gactgcgaca agtcggaaca tgtcgatcgg ttgaccctgc gcttccggca gagcgacatg 2641 gagcgggaat atcacaagga cttcgatctg ggcttcacca cagcgatggg ctgctccctg 2701 ctgctcctga ttttgggtgc tgccctccag gtgaccgccc tgccgcgcac cctcatcctg 2761 ctgctgctct tcctcttcgc cttcatctgg gtgagcgcca tcctgatgct cctgctggcc 2821 gtgcggctca agtggatcat ctgggacatc tcggagagct tctcgctgcg catggccatc 2881 acgatattca cggtcatact catttactcc gtgggacagg tgaatgtgtt cacttgtgtc 2941 tcggaccatc catgctcggg aaatgcgacg tcctccttcc cgaacgactc gcatcgcaag 3001 tgctcgctgc cccagtacgt ctccctatcg gcggcctttg ccttcctatc agtgtccgtg 3061 ttcctcaggc ttcccatcat attcaaatcg ctgctggtgc tgggcatggg caccatctat 3121 ggcctgttca tagagctgtc gcatcagaac atcttcgagt gctacgacaa ccgggtcaac 3181 gcctcgattc cacttcactt gatctcgctg gcccgcattg gcatcttcat gattgccatt 3241 ctggtgcacg gccgcctggt ggagggcact gcccggctgg acttcctctg gcagctgcag 3301 gcctcgcagg agaagaagga gatggacgtg ctgcaggagt cgaacaagcg cattctgcac 3361 aatttgctgc ccgctcatgt ggctgcacat ttcctcgatg cgcaattccg caacaatatg 3421 gagctctacc accagagcta cgccaaggtg ggcgtcatct ttgccagcgt tccgaatttc 3481 aacgagttct acacggaaat ggatggctcc gatcagggat tggagtgcct ccgtctgctc 3541 aacgagatca tcgcggactt tgatgagctg ctgaaggagg atcgcttccg gggcatcgat 3601 aagatcaaga ccgttggcag cacctacatg gccgtcgtgg gtttgatacc cgagtacaag 3661 atccagccca acgaccccaa ttcagtgcga cgccacatga cggcactgat cgaatatgtg 3721 aaggccatgc ggcattcact gcaggagatc aacagccact cgtacaacaa ctttatgctg 3781 cgcgtgggca tcaacattgg ccccgtggtg gctggagtaa tcggagctcg gaagccgcag 3841 tacgacattt ggggcaacac ggtgaacgtg gccagccgca tggactccac cggagtgcct 3901 ggctactcgc aagtgaccca ggaggtggtc gacagcctgg tgggctcgca ctttgagttc 3961 cgttgtcgcg ggaccatcaa ggtgaagggc aaaggcgaca tggtcaccta tttcctgtgc 4021 gacagtggca ataagtcgct caacggcgag gtgcgcaatg ccatgtccct gccgcagagt 4081 ctccatgcgc cggattacta catgaaggtg gcgcagtttc cggagaatcg tgtgaacagc 4141 gatacgtaca gcaagaagcg ggaggagaat ggaggaaatt tcaccgtagg tggcgaggag 4201 cagcagctat tgctgcagca tcagcacaag cagctcgaac caccgctacc gcttccggcg 4261 ccaccgcctc ctcatcatca tctgcaccag cagcagcagc agcggctgaa cagcaagctg 4321 cagaagcaac cgatcttcat ggccaacggc ggactgccga atatccggga gaacggcaat 4381 gggcacaatg gtcacaacgg cgagcagcag cagccggctg cagtggcggt tcccctccag 4441 cagcccccaa cccagcaact ccagcaactc caacaactcc agcaccacca aatccagttc 4501 cagcacacgc cggttccagt gcagcaccag atcctactcc accaccagca tcagctgcag 4561 ctgcagcatc acaatcagcc cgttcccgtt ccttcggtaa tgttgcgcga gtttaatatt 4621 attgagaacc cgacttccgg tggccggcat ccgcagatgg agcagctgcc gccgtcgcat 4681 catggcagcc tggatcaatc gggtttggga atgggaatgg gtatgctagg cggcggcggc 4741 gactgcttca tgatgcctcg tcgagtgccg gcattaaacc agcatggcca tcatccaacg 4801 catcacctcc attcgaatct gaatatgaat atgaatcagc acccgccatc gttcaccagt 4861 ttgggctatg gccaatgccg ggagagcgag ccgctattgc atgccagcag catcgcgccg 4921 gtagccaagc taccaccgca tcctgccctc caggagcatc agcagcagca gcaggagctt 4981 ccccagcgac agcaacaaca acagtacgcc atgtactcgc agcagccgca gctgccgccg 5041 aagcctgcgc cgctgaggac gtacatgaag ccgctgccga agctgccggc ggcggaactg 5101 gaggagagcc gtgacatgtc ctccaccgat gacctcagct cgcgtccgca ctcgccatcg 5161 atgagcagct cggacgagag ctactcgaag accaccgagg gcgagggcga aaacgacgag 5221 gactccaggc cgcggatccc caatggagct gtccaccacc atcatcatca ccgcaatggc 5281 tataacaatg gtggtggcct ggtcaatccc ctgcaatggc tctatccctg cgacattcag 5341 gtggatccca catcgccggt ggtcgatctg catgactttg agctgagctc caccacggag 5401 agtcagcagc ccaagggcga tagttgcaat agctttgact atcagaaggc cacggcagct 5461 ggaggaattg ccaccaagtc gccctttgag cgggaactgc agcgactgct caacgaatcc 5521 tcgagaggcc gtggtttggc cactactgcg actgcaactg caactgctac cacgacgacc 5581 acggatcaca cggccagcaa tggcagccgg aatgagatga tgatgagcta ctccttcagc 5641 aatggcaagc taagtggagc tggtggctcg ggatcagcgg tgggcaatgg cagcggcagc 5701 agcaatggca atctcagcgg cggcagcggc agcaactcga acagtggcaa caacaacagc 5761 ggaggtcaca aggcggatct gcagcagcag gatcctcagg agctgaagct gcccggcagc 5821 agcagcttca tgatcgccaa gcatccggtg ggcttggagg ccatcaagga gataacgcgc 5881 aacaagaatc catcggagtc aagccaaatg caaacctcgg acacggagtc ctgcgagatc 5941 ctgcacgaga cgcgcaacca gatgcacatg ctggccatgc tggagatgca gacggccaag 6001 gagcagcagc agctgaggac acatcgccag cggccgcgct ccaaggagct gcagtacagc 6061 cacgagagcc tggacggact ggacggagca gcgatgcagc cgcggcagcc gcgcttccac 6121 caccaccacc accaccatca tcatcaccac cagcagcagc agcagcggta caaccatgtg 6181 caggagcagg aggagcgtga cgataccgag gacaacctgg ccgacgagga gttcgaggac 6241 gatgaagtgg gtcgcgatgt gcgacagaag cgcctacaga agccggacaa aaccagtcac 6301 aaaagggggg agcaggagca ggacgccgac gacgatgatg atgatgatga ggttgatgat 6361 gttgatcaag aggatgatga ggagcaggag caggagcacc ggaacggagg gcagctgccg 6421 ctgacaaacg gcagcagcaa tgtgataaac gacgagctga aatacggggc ggcccatctc 6481 aaccaccagt ccatggactc caatccgttg gagagccaat cggaatggtc ggacgacgat 6541 tgtcgcgagg aggccacagg gggcgctgaa tccacgggct acataacgga tgagcctgga 6601 ttggagaaca tctcgctgct gaacgaagcc gggcttaccg atgccgaggg cgccctctcg 6661 gacgttaact cgctgtataa cgcgcccgat gtggacgaca cctcggtgtc cagccgggcc 6721 agctctcggc tgctcagcct ggactcgctg agcggcctct acgactgcga tttggactcc 6781 aagcacgagc tggccattgt caatgcctcg cacaagatct ccagcaaatt cggacagccc 6841 acatcgccgg cacagcagca acagcagcag ttgcagcatc agcatcagca gcagactcaa 6901 cctcaaatac aagttcagtt tcagtccgcc gaggagctga gagagtaaag attgaagatt 6961 gatgatgatg gagcgttaaa cactcaaacg ttgttattgc tataatgcaa atggtgtcta 7021 ataatttaca ataaaccaac ctaaactaaa gctaaagcta aagtaaacta aatctagaat 7081 aggtgacaga tatatgtatg aatctatata tatttatgta tgtaaggaag cagaggcact 7141 taaagctgct ctatggcacc cctagatgta actcataaat agtatatata tattatatgc 7201 aagaaaatct atatgtattg aaagtaagct aaacacgtag tcattggtta cccagttaag 7261 cgttccagtt actacaatcc cgcgcgaaag aaatcgaaat cgaaattata attgatattt 7321 atgcaatgcg aatccatgcg aatgaattca tcatttagtg cgcttagtcc ttggtcctcc 7381 taaggactga attaactccc atatgttatt aatgtacgac tatatatata tatgtatatc 7441 attttgataa tcgaataagc aacaatttgg ccatttatac gaagccacac aaccaatgca 7501 tgacaagatg taaataaagc aaaacaaaat gttatagata tttttccgat attactgtaa 7561 ggcttatata aatttaccca tagactgcgc caccatgaat tcgaatttta aatttaaatt 7621 taaaccgaaa ttaaaactcg gataatcgga tattaaagtc ccacgtggaa gatacgtaaa