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LOCUS XM_070218165 6425 bp mRNA linear INV 09-DEC-2024 protein sprint (spri), transcript variant X3, mRNA. ACCESSION XM_070218165 VERSION XM_070218165.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6425 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6425 /gene="spri" /note="Src homology 2 domain-containing protein sprint; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108060859" CDS 335..5680 /gene="spri" /codon_start=1 /product="protein sprint isoform X3" /protein_id="XP_070074266.1" /db_xref="GeneID:108060859" /translation="MSHETAAVPGAVVSSCADNSSKVEVIVYTTKSDKTLKQNMNAKD DTLRKRTSLIIVPQQVDVDLDTKVDQTRENVNGNRNSTASMDSCVSNTTSHSNQSSSG SSSTSSGSSSGSEDAHAAYQDLQNGNGNGNENANHLSPSPVPRCHSSSSSSSVSESTS CSSSADYSLREQLKNFANRNAIEEQILRSSAGGGGEGVPESTTTTRLLKGMSLPVGDQ QSAVCDSLLSPQEAPLGRRYAEVAQFKGHPKARTSEPLPSAGATPSSLEAASVDAGGN NNNINNNHNGQQSQKSQQQASLSAISSKLNVLAAQSNLNNNNTSSQSGSMTSASNQKQ NQNQHQNFNQNQSTDSRRSSSLDPDGDVDDVVDAVHGGAFEDDMQALLPKCSRRSRDE LSQSRTSLVSSSEGGILAEGETSSEDDEEEPVEAEDEDEGEEESSRDSSDNSPPCDLG LMERLLVTHPMWFLPGIQRSGAVHLLQGKEEGTFIVRGSSQPNTMAVSVRLPQDTGPY IEHYLIQSHDNVLSLESSRFTFGSIPSLIAHYAQCCDELPVQLMLPRVLREANNRKKL SSLALLGQEFWSYASSPALLGGPPTPTVAPSSRDQQQQQHLLDAKSPLSLTETSGLGT ATFFSDALVKPPPTGAPPLPGSSSLFSPTGSGQLLGFFSQAGTPSDTTNSSLSSFTTS GGQHLQLLSPNSVDSVILTMSPVDNPGHYLPGSMGGAAPTAICPSLIEQQQQQQQLST FKVAPAAADQVVDQVRPQRPKPPNTLNLKPPAPPLRWSKPHSPDQNGGGANGNFTVTT TVTFSMENGGGGGGGLASGAAAGNGSGKFVEVTTPAANNPFNALLNGQASTFQTFAKR LSPEGECKDTLSSQGSSSNDGRWPPTASRKLLTANSPLTPLTPSGGSSSSGGKSRKSR AGKESQHYKESDILESPPLQYCASALSDKISDYEDVWSHDPSDRASLLTSFRPVLDSV GGVMNLRPDLLAETPSTPTPTQHLTPCEEETTTATPNESSSQSLLQFSGDVPARSRAG LLLPNLSGQAPPAAMSQSMSAAEDDGGDTTPTAEGQNLGGSSRSKQGSPFYAEPADAL RQAGLTSAATAILRRQHRSQMLHASQRHSEPLKAGFGGSGNGAMLPSELEKLAGSLDE LKPKPKVSQQQKQSQQQQQPSKRARNLIDHWQLDSSWEFMAKQDQGSGSDYDAAAIDW QEKENSLGKKRTLTIHQIIANRLPDLNLPELVRCSTPPSQTSALQPHVQGQDKDKDKV GLGCRLSSYDNVFCQNSFGGIDSAQSDDGTIFSEPWDSSQWDSFLPHDDATINSDTIH LSKCRPALSEDDTIAEELQSTKDGSNGSCNQDTLKANRNGGAGHHKPNNTTNGKANSR PKVATILRNPSMRDREVLCHPRNKMSIQGSGPGDSLRAYTLQLAQDPSSTFARNIENF ICCTKESREAAPQVVMRNMRQFMSGMKNYLVKHGEGKFHAELETARSRLKSDEFLNLD AMLETVMHQLVVLPLREHLYGIFVDHYQRSEDIQLLAQNVRYACEREAADFGIRPTVT PPSQAALRLIANLLWRLQEAELPLDKLELFLCVISTVFDATGCPRGQQLGADDFLPVL VYVVAKCGFVGAEIEAEFMWGLLQPTLLNGEPGYYLTALCSAVQVLKTFMASEGESGS GSLDWRSSCLPACSSVLRVIIPDECNGSLQTRTLPVRPHTTTREVCRIIAHKARITNP QDYALFKLVDGEETLLTDAECPQDARLAAKGKHCMLAYKRIDAKIAWPTAQLAGH" misc_feature 1685..1978 /gene="spri" /note="Src homology 2 (SH2) domain; Region: SH2; cl15255" /db_xref="CDD:472789" misc_feature order(1739..1741,1793..1795,1865..1867,1871..1873) /gene="spri" /note="phosphotyrosine binding pocket [polypeptide binding]; other site" /db_xref="CDD:198173" misc_feature order(1868..1870,1949..1951) /gene="spri" /note="hydrophobic binding pocket [polypeptide binding]; other site" /db_xref="CDD:198173" misc_feature 5018..5314 /gene="spri" /note="Vacuolar sorting protein 9 (VPS9) domain; Region: VPS9; pfam02204" /db_xref="CDD:460489" misc_feature 5384..5638 /gene="spri" /note="Ras-associating (RA) domain of Ras and Rab interactor (Rin) protein family; Region: RA_Rin; cd01776" /db_xref="CDD:340474" polyA_site 6425 /gene="spri" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgctcgacga cgacggttca gcgcggttgc tcgaaaatcg aataagaacg ccgacaatgt 61 tgtttgccat tttcacacgc gaataatttc gaattgcgaa ttttttgttt ttgcaaactg 121 tgaaaatgcc atcgaagctt cggaaaatag tgcaagaagt tgcattttaa acaatacaaa 181 agtacgaaac tctttctaca gtcaacgaac ttgtcatcgc ggaagcccag aagagtgaaa 241 gagacggaag agccggagag agagagagac agagtctctt ctcccctctg aaatttgcat 301 agagaaacac gacacagaaa gcagcaacat caggatgtcg cacgaaacgg cagcagttcc 361 aggagcagtg gtttcctcct gtgcggacaa ctcgtcgaag gtggaggtca tcgtctacac 421 caccaaatcg gataagacgc tcaagcagaa catgaatgcc aaggatgata cgctcaggaa 481 gcgtacttcc ctgatcatag tgccccagca ggtggatgtg gatttagaca caaaggtgga 541 tcaaactagg gagaatgtga atggaaatcg caactcaacg gccagcatgg atagttgtgt 601 ctcgaatacc accagtcata gcaaccagtc gtcgagtggc tcctcgtcca ccagcagcgg 661 gagtagcagt ggctccgagg acgcccatgc cgcctaccag gatttgcaga atggcaatgg 721 aaatggtaat gaaaatgcca atcatctttc accatcgcct gtgcccaggt gccattcatc 781 cagctcctca tcctccgtct cggagtccac ctcgtgctcc agttcggcgg actattcgct 841 gcgggagcag ctcaagaact ttgccaatcg aaatgcaatc gaagagcaga tcctaagatc 901 ctctgcagga ggaggaggag aaggtgtccc ggaatccacc accaccactc gtttgctcaa 961 gggcatgagt ttgcctgtcg gcgatcagca gtcggccgtc tgcgattccc tactcagtcc 1021 gcaggaggct cctctgggac gacgctacgc cgaggtggca cagttcaagg gtcatcccaa 1081 ggcaaggaca agtgaaccgc tgccctctgc cggagccacg ccctcttctt tggaggcggc 1141 ctctgtggat gccggtggca acaacaataa catcaacaac aatcacaatg gccaacagtc 1201 acagaaatct cagcagcagg cgagtctcag cgccatcagc agcaaactga atgtcttggc 1261 cgcccaatcg aatctgaaca acaataatac gagcagtcag tcaggatcca tgacatctgc 1321 ctcgaatcag aaacagaatc aaaatcagca tcagaatttc aaccaaaatc agagcacaga 1381 cagtcggcgg agcagcagcc tggatccgga tggggatgtg gatgatgtcg tggacgcggt 1441 ccatggcggc gccttcgagg atgatatgca ggccctgttg cccaaatgct cgcgtcgctc 1501 ccgagatgag cttagtcagt cgcgcacatc tctggtgtcc agctcggagg gcggcatcct 1561 ggccgagggc gagacgtcca gcgaggatga cgaggaggag cccgtggagg cggaggacga 1621 ggatgagggc gaggaggaga gcagccggga ttccagcgac aattcgccgc cctgcgatct 1681 gggactcatg gagcgcctgc tggtgaccca tccgatgtgg ttcctgcccg gcatccagcg 1741 ctccggggcc gttcatctgc tccagggcaa ggaggagggg accttcatag ttcgcggttc 1801 cagccagcca aacacgatgg ccgtttcggt gcgactgccc caggatacgg gaccctatat 1861 cgagcactat ctcatccagt cgcacgacaa tgtcctgagc ctcgagagct cgcgcttcac 1921 gttcggctcg ataccttcgc taattgccca ctacgcccag tgttgcgatg agctgccggt 1981 gcagctgatg ttgccgcgtg tcctgcggga ggcgaacaat cgcaagaagc tgagctcctt 2041 ggccctgctg ggtcaggagt tctggagcta tgccagcagt cccgccttgt tgggtggtcc 2101 gcccacgcca acggtggcgc catcgtcaag ggatcagcag cagcagcagc atctgctgga 2161 tgccaagtcg ccgctctcgc tgaccgaaac cagtggcctc ggaacggcca ccttcttcag 2221 cgatgccctg gttaagccac cgcccacagg agcaccgcct cttccaggaa gtagttccct 2281 cttcagtccc accggaagtg gccagttgct gggattcttc agccaggcgg gaactccttc 2341 ggatacgaca aactcaagcc tcagctcctt caccaccagc gggggtcagc acctgcagct 2401 gctgagtccg aattcggtgg attcggtgat tctaaccatg tcgccggtgg acaatccggg 2461 tcattatctg cccggttcga tgggcggagc agctccaacg gccatttgcc catcgttaat 2521 cgagcagcag cagcagcaac agcagctgag cactttcaag gtggctccag cggcagcgga 2581 tcaagtggtg gatcaagtgc gtccgcagcg accgaagccg ccgaacacat tgaatctcaa 2641 gccgccggca ccgccgttgc gctggtccaa gccgcactcg ccggatcaga atggaggagg 2701 ggccaatggc aactttacgg tcaccaccac ggttaccttt tcgatggaga atggtggtgg 2761 aggaggcgga ggattggcca gtggagcggc ggcgggaaat ggcagtggca aattcgtgga 2821 ggtcaccacg ccggcggcca ataatccctt caatgccctg ctcaacgggc aggccagcac 2881 tttccagacc ttcgccaagc gactgtcgcc ggagggcgag tgcaaggata cgctgtcctc 2941 gcagggatcc tcctcgaacg atggccgctg gccaccgacg gctagccgta agctcctcac 3001 cgcgaactct cccctgactc cgctgacgcc cagcggcggc agcagcagca gtggcggcaa 3061 gtcaaggaaa tcgcgagcgg gcaaggagtc acagcactac aaagagtccg acatcctcga 3121 gagcccgccg ctacagtatt gcgccagtgc gctgagcgac aagatcagcg actacgagga 3181 cgtctggtcg cacgatccga gtgatcgggc cagcctgctc accagcttcc gccccgttct 3241 ggactcggtg ggcggggtga tgaacctgcg acccgatctg ctggccgaga ctccgagcac 3301 tcccacaccc acgcagcacc taacgccctg cgaggaggaa accaccactg ccacgcccaa 3361 cgaatcctcg agccaatccc tgctccagtt ctccggcgac gttccggccc gctcccgggc 3421 aggtctgctc ctgccgaatc tctcgggaca ggcgccgccc gcggccatgt cgcaatcgat 3481 gtcggcggcc gaggacgatg gcggcgatac cacgcccacg gccgagggcc aaaacctcgg 3541 cggcagcagt cgcagcaagc agggcagtcc attctacgcc gaaccggcgg atgcactgcg 3601 tcaggcaggc ctgaccagtg cggccaccgc cattctgcgg cgccagcatc gcagccaaat 3661 gctgcacgcc agccaaagac actcggaacc actgaaagcg ggcttcgggg gatcaggaaa 3721 tggggcaatg ctccccagcg aactggagaa gctggccggc agcctggacg agctgaagcc 3781 caagccgaag gtctcccagc agcaaaagca atcgcaacag cagcaacagc ccagcaagcg 3841 ggcacgcaat ctcatcgatc actggcaact ggacagcagc tgggagttta tggccaagca 3901 ggatcaggga tcaggcagcg actacgatgc ggcggccatc gattggcagg agaaggagaa 3961 ttcgctgggc aagaagcgta cgctgaccat acaccagatc atcgcgaaca gattgcccga 4021 tctcaatctc ccagagctgg tgagatgctc gacgccgcct tcgcaaacga gcgccctgca 4081 gccgcatgtc cagggacagg ataaggataa ggataaggtc ggactgggtt gccggctctc 4141 ctcgtacgac aacgtcttct gccagaactc cttcggtggc atcgattcgg cccagtccga 4201 tgatggcacc attttctccg agccctggga ctcctcccag tgggactcct tcctgcccca 4261 cgatgatgcc accatcaact cggacaccat tcatctgtcc aagtgccgac ccgctctctc 4321 cgaggacgac acgatcgccg aggaactgca aagcaccaaa gacggcagca atggcagctg 4381 caaccaggat acattgaagg ccaacaggaa tggtggtgct ggacaccaca agcccaacaa 4441 taccaccaat ggcaaggcca acagtcgacc caaggtggcc acaattctgc ggaaccccag 4501 catgcgggat cgtgaagtct tatgtcaccc ccgcaacaag atgagcatcc agggcagcgg 4561 ccccggcgac tctttgcgcg cctacaccct ccagttggcc caggatccca gctccacgtt 4621 cgcccgcaac atcgagaact tcatctgctg caccaaggag tcgcgcgagg cggcgcccca 4681 ggtggtgatg cgcaatatgc gtcagtttat gagcggcatg aagaactatc tggtgaagca 4741 tggcgagggc aagttccacg ccgaactgga gactgcgagg tcgcgtttga agtccgatga 4801 gtttctcaat ctggatgcca tgctggagac tgtgatgcat cagctggtgg tgctgccgct 4861 gcgggagcat ctgtacggga tattcgtgga tcactatcag cgcagcgagg acatccagct 4921 gctggcccag aatgtacgct atgcctgcga acgggaggcc gccgactttg gcatccggcc 4981 aacggttacg ccgccctcgc aagcggcact gcggctgatc gccaacctgc tgtggcgcct 5041 ccaggaggcc gagctgccgc tggacaagct tgagctcttc ctctgcgtca tctcgaccgt 5101 gttcgatgcc accggctgtc cgcgtggcca gcagctgggc gccgatgact tcctgcccgt 5161 cctcgtctat gtggtggcca aatgcggttt tgtgggcgcc gagatcgaag cggagttcat 5221 gtggggcctc ctccagccga cgctgctcaa cggggagccg ggctactacc taaccgccct 5281 ctgcagcgcc gtccaggtgc tcaagacctt catggcctcc gagggggaga gcggcagcgg 5341 atccctggac tggcgctcca gctgcctgcc cgcctgctcc agtgtgctgc gcgtgatcat 5401 tcccgacgag tgcaatggat cgctgcagac ccgcactttg ccggtgcgac cccacacgac 5461 cacccgcgag gtgtgccgca tcattgccca caaggcgcgc atcacgaatc cgcaggacta 5521 cgccctcttc aagctggtcg acggcgagga gacgctgctg acggacgccg agtgtccgca 5581 ggatgcccga ctggcggcca agggcaagca ctgcatgctg gcctacaaga ggatcgatgc 5641 gaagatagcc tggccgactg cccagctggc gggacactga ttcggtcgcc cagtttacac 5701 acctacgaca taccgccccg ccccccgcca aacccgccct gcccttcttg ctcactaacc 5761 aagcatattt gattaataat ttattattat tacattaaaa tatacttagt agcctgtaag 5821 taaagctaat taatgctaat tagaaaacat ctaatgtgta ctaaacatca gtattgagtt 5881 aagtgtgttt ttttttcccg accctcgggt cgaacccctt ttttttttgc ttataaaatg 5941 tactatgcga ataatacata tacacacata tatacgatat ataaacttaa gcgagtagag 6001 atgcaaaatc tgcacaaagg aagtggcaag gagtcatcta aacgaatcta cactctaaac 6061 atatatgcag gcacgatcgt tcggatcgtg tgtgccacca ccctggagac caaaagcaca 6121 gttcaacaat cacagcaaca atcaatcatt cattcaatca agcgatctag ctatctagcg 6181 atcagtgcat accatcaaac tacacaaaag gcatttaggt gtgaatgggt ttcgtgtttt 6241 tttaagaagc taaaccatat tatattaaag tataaaccac tacattttaa tatttatgtt 6301 cgactaaaca ctgctatcaa ccctcgagat atacataaat acatacatat tttttttgta 6361 tactttgtaa aatatgtgac acataatcca aatagcaagc aaataaataa ccaaaataaa 6421 acaaa