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LOCUS XM_070218150 3718 bp mRNA linear INV 09-DEC-2024 transcript variant X2, mRNA. ACCESSION XM_070218150 VERSION XM_070218150.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3718 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3718 /gene="PGAP1" /note="GPI inositol-deacylase; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:108063909" CDS 92..3016 /gene="PGAP1" /codon_start=1 /product="GPI inositol-deacylase isoform X2" /protein_id="XP_070074251.1" /db_xref="GeneID:108063909" /translation="MFMFRNCAVLLVIGSICCLLYGLFNLHVEVEPNACRMTYMFGEP MFAKVGVKGGDEYPNYGLYYYYEGLRQPLDPLKRRMTGAPVIFVPGNAGSYKQVRSLA SVALRKAMSDDAGLHLDYYTIDYDEELSALYGGYLPRQRSYLKLCIRTILSIYEGRAE QPSIVLIGHSMGGKLAQSVLVDPSIGQHINTIVSISTPLDQPVLNLDAQLEGFYGQTD AVLAKLRTATVPTVTTNVCDSLHQRPPSVQRMASQDSSARLDNVLLISTGGGNRDLLV RPGLTSSRFNDLHAMTSAIPRVSLSCDHLSAVWCLQFMQAINRFLFSIAYVREDRSSI AFGTNKQRNLQSALATFVKPRRRQQSTVRFGAAGNWHEERRLVINKYFSNGLKGIFFD LIGLQRQERYRKMAIEALNVDDEDWLFGCSAQEHNQTGQLYCERATSLMHLVQRLPNE DRDPRSIAILDLHNLRKTYVQWSHVLVRLPPSAKRIGYNLDIYDPRERVTDIKMPRWY TMAKLPLINETLQGTLHQRLRVAEMVDPYQSIRVIVEPLQCISAEYRVTARICVPWAA GFERFQTLKSFDQKPQLYVNVPTLVPRHYNTTLNPVTLDLYLDPTCRYRISYEYSYSS ALSRLILEFYGWLPAHLVCVLLIVLRKQVETFHEVGTFRSLRPYVGYLQYTSLYVVTA CRLLKKLIITSRLLPEPESLDYSINVSIVIHCAAIALSLLATLGTWLALTLYGNAFYR LALRITRLSQPTSNVMLSIMTHLPITFGILTIATAMGTCSGVGLLLAFVFYFLMLSNA YKDYLEDFLWQKAANLVRGKPAAVAAEEPNAEEEALETKQEQQPEEEEPEPCVGLQNF SFHVTLLLMLLVQLLLNAPSSLAWVRSRRHGIDLPDPSLYPSIVVMASLSLLLQLRAP QKWQGYWMLSLVFYLLAGVVLLYCQAAIYRLTYVIAGAFALLSVHQSLWILWRRLSSP QI" misc_feature 326..1063 /gene="PGAP1" /note="PGAP1-like protein; Region: PGAP1; pfam07819" /db_xref="CDD:369540" polyA_site 3718 /gene="PGAP1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cacaactatc gcctctcgat agcaccgctc gcatctctag cgcagctggg ccatcaagac 61 ataaacagaa atgaaaaact gaaaatcgag gatgtttatg ttccgaaact gtgctgttct 121 gctggtgatc ggctcgatat gctgcctcct ctacggcctc tttaatctgc acgtggaggt 181 ggagccgaat gcctgccgga tgacctacat gttcggcgag cccatgtttg cgaaagtcgg 241 ggtcaagggc ggcgatgagt atccaaatta cggtctgtac tactactacg agggcctgcg 301 acagccgctg gatccgctga agcgccggat gacgggtgct ccggtgatct tcgtgcccgg 361 caacgccggc tcctacaagc aggtgcgctc cctggcctcc gtggcgctgc gcaaggcgat 421 gtccgacgac gcgggcctcc acctggacta ctacaccatt gactacgacg aggagctgtc 481 cgccctgtac ggcggctatc tgccccgcca gcggagctac ctgaagctct gcatccgcac 541 catcctctcg atctacgagg gtcgcgcgga gcagccctcc atcgtcctga ttggccactc 601 gatgggcggc aagctggcgc agtccgtcct ggtggatcct tcaattggcc agcacatcaa 661 cacgattgtc agcatctcca cgcccctcga ccagccggtg ctcaatctgg atgcccagct 721 ggaggggttc tacggccaaa cggacgccgt gctggccaag ctgcgcacgg ccacggtgcc 781 cacggtgacc accaatgtgt gcgacagcct gcaccagcgg ccgccgagtg tgcagcgcat 841 ggccagccag gacagctcgg cgcggctgga caacgtgctg ctcatctcga cgggcggcgg 901 caacagggat ctgctggtgc ggccaggact caccagctcg cggttcaacg atctgcacgc 961 catgacctcg gccataccca gagttagcct gagctgcgac catctatccg ccgtgtggtg 1021 cctgcagttc atgcaggcca tcaacaggtt tctcttcagc attgcgtatg tgcgcgagga 1081 ccgctcgtcg atcgcttttg gcaccaacaa acagcgcaac ctgcagtcgg ctttagccac 1141 ctttgtcaaa ccgcggagac ggcaacagag caccgtgcga ttcggagcgg ctggaaattg 1201 gcacgaggag cggcgtctcg tgataaacaa gtactttagc aacggactga agggcatctt 1261 cttcgatttg atcggcttgc agcgccagga gaggtacagg aaaatggcca ttgaggcgtt 1321 gaatgtggat gacgaggact ggttgtttgg ctgctcggcc caggagcaca accagacggg 1381 acagctttat tgcgaaaggg ccacctcgct gatgcacctc gtccagcggc tgcccaacga 1441 agatcgcgat ccccgcagca tcgccatcct ggatctgcac aacctgcgca agacctacgt 1501 gcagtggagc cacgtgctgg tgcgcctgcc gccgagcgcc aagcgaatcg gctacaacct 1561 ggacatctac gatccgcggg agcgcgtgac ggacatcaag atgccgcgct ggtacaccat 1621 ggccaagctg ccgctgataa acgagaccct gcagggcacg ctgcaccagc ggctgcgcgt 1681 cgccgagatg gtggatccgt accagagcat tcgggtgatt gtggagccgc tgcagtgcat 1741 cagtgcggag taccgggtga ccgccaggat atgtgtgccc tgggcggcgg gctttgagcg 1801 cttccagacc ctcaaatcgt ttgatcagaa accccagttg tatgtaaatg tgccgacttt 1861 agtgccccgg cattacaata ccactctgaa tccggtgaca ctggatcttt acctggatcc 1921 cacttgccgc tatcgcatca gctatgagta ctcctactcc tcggccttgt cgcgattgat 1981 tctcgagttt tacggctggc tgccggccca tctggtctgc gtcctgctga ttgtgctgcg 2041 gaagcaggtg gagaccttcc acgaggtggg aaccttccgc agcctgcgtc cctatgtggg 2101 ctacctgcag tacacgtcgc tctatgtggt cacagcctgt cgcctgctta agaagctaat 2161 catcaccagc cgcctgttgc ccgagccaga gtccctggac tacagcatca atgtgtccat 2221 tgtgatccac tgcgcggcca tcgccctgtc ccttttggcc accctgggca cctggctcgc 2281 cctgacgctc tacggcaacg ccttctaccg cctggccctg cgcatcacac gcctctcgca 2341 gcccacctcc aacgtgatgc tctcgatcat gacccacctg ccgattacgt tcggcatcct 2401 gaccatcgcc acggccatgg gaacctgcag cggagtgggt ctgctgctgg cctttgtctt 2461 ctacttcctg atgctgtcga atgcctacaa ggactatctg gaggactttc tctggcagaa 2521 ggcggctaac ttggtgcgcg gcaagccagc tgcagtggca gcggaggagc cgaacgcaga 2581 agaggaggct ctggaaacga agcaggagca gcagccggag gaggaggaac cggagccctg 2641 cgtgggcctg cagaacttct cctttcacgt cactctgctg ctgatgttgc tcgtgcagct 2701 gctgctcaat gctcccagta gtttggcctg ggtgcgcagt cgtcggcatg gcattgactt 2761 gccggatccg agcttgtatc ccagtatcgt ggtcatggct tcacttagtt tactcctgca 2821 gctaagggct ccccaaaaat ggcaaggcta ctggatgctt tcgctcgtgt tttaccttct 2881 ggccggcgtg gttctactgt actgccaggc ggccatctac aggctgacct atgtgattgc 2941 cggggccttc gccctgctct ccgtgcacca aagtctttgg atattatggc gtcgtctgtc 3001 tagtccccaa atctagtttg aattttgttc tccaagcgtt aattcgttat ttattgctgc 3061 gttagttggt tcagttgcgt aagccagccc cgtttgggat ctctcctcca gcgggaagtc 3121 caaactgggc cccaatgggc gttgctctcg atttgcctcg atcgcacatt acacgtatta 3181 attgttttta cgcctgtcgc cggcgcttta ggcgctggtt agcgatacct cggacatctc 3241 gggcggccgc acgttaatct ccatttgcgg aaaatgtgtg aaaatgtgcg aaaatgcctt 3301 ggaacagcca cactccccag ccagactgta gtttgatttt agccaaagac gttactttta 3361 gtattttatc tttttatcct ttccgaaatt atttaattca tagtattatt aatcctttgt 3421 tgtggaatac atatcttaat ttaagatcat atgagattga gtgaggattt tgtaaagaaa 3481 atctaaagca atagaaatta actattttct ttatttttat tgtttgtata ttatttttta 3541 atcatccccc aacaatctgt attcttccga ctaagtaata gacctaatgt agctgccaag 3601 tgtcacaaac agaaacaatt cgatgtatgt ataaatattg taaaatgttt tcatttagaa 3661 agtcccttgt ttttacccct aaacgaatac aattttatac atttgtaaac tccgaaaa