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LOCUS XM_059368370 4852 bp mRNA linear INV 02-SEP-2023 (LOC106083856), transcript variant X17, mRNA. ACCESSION XM_059368370 VERSION XM_059368370.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4852 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4852 /gene="LOC106083856" /note="proton channel OtopLc; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:106083856" CDS 1789..4599 /gene="LOC106083856" /codon_start=1 /product="proton channel OtopLc isoform X16" /protein_id="XP_059224353.1" /db_xref="GeneID:106083856" /translation="MQRCPYIHEMRERLLNDQNRESLPLEQMERANLLDNRQSAELQQ LNGDGYHTSPAHQRTPLVPRDLGEDFNLDFDDDFPIEVRRPKNAKTSLFIVTSLVYAI ILIVVCIAYVISDVTTHRLPVLYYESFFTYLYGVSILFLLYVFCFLLQESSCCNGGNN QPKSPKKEKKSKKKEKDPADSKDAKGSKDSGKSGKPSPYQDTQVDAEVAVTPKNTRKR KTTHSDLTHGSFFLRVGAIAFGLGAMIYIGLEFGSFFEIPFDSPCHHILIGVNPLLQM IFTFMQMYFIFMNARLNIHRFKVIARFGLMHVVATNICVWIRTLVKESLLEITLYHQR RESDPNESSIGQSIRQHALRHAGTVLRTHYGPNEEFEVLDGEDLLPKNAYTTNGALSK MLAKTVDGISKTLGMGSNEIADVVTTTTTTTARPAFTTPSYQWQSTTVARKLKKFITS TTAAATMGTSPTTTSTTTTTTTTALPITSPLATTTTTELPFNSYQHLYTTTASPAAAM AAAADHLAASNGGASEAAATAASSFDSSHVASSVASFFSSLISSTPSPITTTTTNNPI TVSSSMTDKATENSFGLINNLMENSFQTFSGISHPEAASIVTFENYENLDNIYPAALS SNVGTLNSTACGRVDIMGTIVYDSAPYLYPFIIEYSLIGAVVLYVMWKHIGRYPGRMN DDDLEHRLEVMLSRRAVAMAQQARSGRVDCVGSSKGLFFGLLLLVGALICLILFFVLV RHQQFSLLAIYLADASHCILMVFAILAIIIGFIRVKNLKFRCEEQSNLNDILLRISAF GLFTYSVFSVISGSLKVLEHEPSLLVTTTSAVAVLQVILQLLFIADVSRRRVHLPEHD RSKPGRQIVTFLLICNVAMFAIYTFDAQKVYANPVQLDFYGFVPWAIIQRVTLPLCIF HRFHSAVTLAEIWKTTYKARLE" polyA_site 4852 /gene="LOC106083856" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ggtagttcca atcagtctga aacgaattgt tgtgaacgat ggaagaaaat aaaaacgttt 61 gaaaaaaatt tggtgtagaa cgttgagaca gacatcatag tgaccgttta tttgtgtgtg 121 tagtaaatca aatcagaata tagagtccga atcagtggtg tttgctggtg agaattgtgt 181 tgtggcttgg tagtgcaaaa aaggaaatag tgaagtctgc caggaagtta ctaaaagaga 241 gagtgaataa atgtgctaaa tatttaataa aaaggaattg gagttacatt gaaaatatag 301 aaaagaaaaa catatcaaaa aagagtttct gacaaaacca aagtttatat caaaattgtt 361 gtaatactat ttaacaaaaa aaaaaaaaag ccccaagtgc catagttgcc agagaagtct 421 gcctataaaa caaaagtatt ttttgcatct ttaaaacaaa aattaaataa aaaaaacaaa 481 atcctttcgc ttttgctgag ccatacaaaa gtagccataa ttgactcttt aatcaaaccc 541 taaacaaaat caaagtcctt tgtgtctaca aaataacggc tactcacacc tttgtttgtt 601 cgccaaagag taaaagtatc aacaaacaaa actaaaaata tactgttaat catacacaca 661 ctcacacaca ctgtcctgtg taagcgcata caaacacagc gtgtctagga tgttcacaaa 721 tccatcatct tcatcattat catctctacc tttataactg gatgtcctca ccttggcagc 781 aggactgaca cacagtgtgt ttgttgttgc tattcaaagt gaagtaccaa aaataaacaa 841 cagcaaaaaa ttgagatttt atagcaacag tgtttggtgg ataggaatag aaagaaatac 901 caaaacaaac gcaaacaaca actaccaccc tcataaaagt ttgcttgtta acgaggagaa 961 aaaactgaat taaggaaagt agacataaaa aaggatacaa aatttcccct tgtataaaat 1021 tgtttgcctt gctattaaat cataagtgtt ggcacctttc ccccccttaa cgaaatcatc 1081 actgccaaaa attcatatcg aaattggtag taaattatcg attaaaaaaa aaaaacaacc 1141 aaacaacaac ctcgttaaat tgtttgcaat tgattgattg atttcgtgct ggttgattaa 1201 atccaagtgc gtgtgtatgt aatcggctaa atttcggttt gacaataatt aagtcatact 1261 taagcttgaa ttcatcaacc taaagtggat gaaattaatt gtggactttt ttcaagtaca 1321 atacatcaaa gtcatcattg tcgtgctaaa gaagctcatc gtgacaacca tataagcgag 1381 actgcctcaa tctatttgga caatacaact ctacacacct aagattatta actggttatc 1441 aaaacaataa aattgaccaa atttattctc cagcaaagct aaatggaatt tcaacaaaat 1501 cgactgattt ttgactatta gatatacaac aaataacaaa aagaagatca aaacaaaaaa 1561 atttatatac acacaaaaaa attgattagg actttttcta caaatccaaa aaaacaaata 1621 ataaaaaaaa aaaaaaacac aaaaccccca ttccctccaa tatcaaaatc agctttattc 1681 tataaactcc agggaaatta aaaacaaacc ctttaacaca tacaaaaaaa gtattatcct 1741 acagcagcat tattcgattt ccccatcccc tcctgttacc gataaggaat gcagcgttgt 1801 ccctatatac atgaaatgcg agaacgttta ttgaacgatc agaatcgtga atcattacca 1861 cttgaacaaa tggagcgagc aaatcttttg gataacagac agtcggctga attacaacag 1921 ctgaatggcg atggatatca cacaagtcca gcccatcaac gtacgcccct ggtgcctaga 1981 gatttgggcg aagatttcaa cttggatttc gatgatgatt tccccataga agtaagaagg 2041 cctaaaaatg ctaagacatc gctgttcatt gtaaccagct tggtgtatgc catcattttg 2101 attgtggttt gcattgctta cgttataagt gatgtgacaa cacatcgttt gcccgtgctg 2161 tactatgaga gcttcttcac ctatttgtac ggagtcagca tactcttcct attgtatgtc 2221 ttctgttttc tgttacagga aagttcctgt tgcaatggcg gcaacaatca accgaaatct 2281 cctaaaaaag aaaagaagtc taaaaagaag gaaaaggatc ccgccgattc gaaagatgcg 2341 aaaggttcta aggattctgg aaaaagtggc aaacccagtc cttatcagga cactcaagtt 2401 gatgctgaag tagctgtaac acctaaaaat acacgaaaac gtaagacaac ccacagtgat 2461 ttgacccatg gcagcttctt tttgcgagtt ggagctattg cttttggtct gggcgccatg 2521 atctacattg gtttggagtt tggttcgttc tttgaaatcc ccttcgattc tccctgccat 2581 catatcttga ttggtgtaaa tccattgttg caaatgattt ttaccttcat gcaaatgtac 2641 ttcatcttta tgaatgccag attgaatatt caccgtttca aggtcattgc ccgttttggc 2701 ctcatgcatg tggtggccac taacatatgt gtctggatac gcaccctggt caaggaatcc 2761 ctgcttgaaa ttactttgta tcatcaacgt cgtgaatccg atcccaatga gtcttcaata 2821 ggtcaatcta tacgtcagca tgccttacgt cacgccggca ctgtgttgcg cacccactat 2881 ggacccaatg aagagttcga ggtattagat ggtgaagacc ttttgcccaa gaatgcctac 2941 accaccaacg gtgctctatc caagatgttg gccaaaacag tggatggaat ttcgaaaact 3001 ttgggcatgg gatccaatga aattgctgat gtggtgacca ccactactac caccaccgca 3061 agaccggcat ttaccacccc cagttatcaa tggcaaagca ctactgtggc acgcaagttg 3121 aagaagttta tcactagtac cacggcggcg gcaaccatgg gtacctcccc cactaccacc 3181 tcaacgacga ccaccaccac caccacggct ttgccgatca cctcaccatt ggcgacaaca 3241 acgaccacag aattaccctt taacagttac cagcatttgt atacgacgac tgcctcaccc 3301 gctgctgcaa tggccgccgc cgccgatcac ttggccgcct ccaatggagg agcgtctgaa 3361 gcggctgcaa ctgctgcctc atcatttgat agctctcatg tggcctctag tgtagcctca 3421 tttttctctt cactcatctc tagcacccca tcacccatca caactaccac caccaacaat 3481 cccatcactg tctcctcctc catgacggac aaagccaccg agaattcatt tggcctcatt 3541 aacaatctca tggaaaatag tttccaaacc ttttccggca tctcccatcc cgaagccgct 3601 agtattgtga cctttgaaaa ttatgaaaat ctggacaaca tctatcccgc cgccctatcc 3661 tccaatgtgg gtaccttaaa ctccactgcc tgtggtcgtg tggacattat gggcaccatt 3721 gtgtacgatt cggctcccta tctgtatccc ttcatcatag aatattccct cattggcgcc 3781 gttgtcctct atgtgatgtg gaagcatatt ggacgttatc ctggacgcat gaacgacgac 3841 gacttggaac atcgcctaga ggttatgctc tcgcggcgtg ctgtggccat ggcccagcag 3901 gctcgttctg gtcgcgtgga ctgcgttggc tcttcgaaag gtttattctt tggtctattg 3961 ttgttggtgg gtgctttgat atgtttgata ctcttcttcg tcttggtgcg tcatcagcag 4021 ttctcgttgc tggccatcta tttggccgat gccagtcatt gtattttaat ggtatttgcc 4081 atattggcca taatcatagg ttttataaga gttaagaatc tgaaattccg ctgcgaggaa 4141 caatccaact tgaatgacat tctcttgcgc atctccgctt tcggcctctt cacctattcc 4201 gtattctctg tgatctcggg cagcctcaaa gttttggaac acgaacccag cctcttggtt 4261 accaccacca gcgccgttgc cgttctgcag gtcatccttc agttgttgtt cattgccgat 4321 gtttcccgcc gtcgcgtcca tttgcccgaa catgatcgca gcaaacccgg tcgtcaaatt 4381 gtcaccttcc ttttgatctg caatgtggcc atgttcgcca tttacacttt cgatgctcaa 4441 aaagtatacg ccaatcccgt gcaattggac ttttatggct ttgtgccatg ggccatcata 4501 cagcgtgtaa cactgccact gtgcattttc catcgattcc atagcgctgt aacactagcc 4561 gagatctgga agaccaccta taaagcgcgt ttggagtaaa tcaattaaac accgatcgaa 4621 acatcaccgc caacaccacc acaacaacaa caacaacaaa attaccacaa caacacaaca 4681 aaacaaaaac attcaattac atttaaggaa attttttggg aaaaaaccaa accaaaccaa 4741 caacaaaagc tagtaaagaa gaagaaaaaa ccgacttttt tgaaggcaga aaaaaaaata 4801 ttatcagaaa atgttagtga atcgtaaaaa caaaactcaa tattaatgaa aa