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LOCUS XM_059368367 8578 bp mRNA linear INV 02-SEP-2023 (LOC106084312), transcript variant X7, mRNA. ACCESSION XM_059368367 VERSION XM_059368367.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8578 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..8578 /gene="LOC106084312" /note="uncharacterized LOC106084312; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:106084312" CDS 2058..7352 /gene="LOC106084312" /codon_start=1 /product="uncharacterized protein LOC106084312" /protein_id="XP_059224350.1" /db_xref="GeneID:106084312" /translation="MKYPQLVSPRAVNAISDWLVSRLEQLGVESPQIYTRLLLSLLQS SVQVNDPIEFSNLEAFIANYKGGHSKRFHLPSDTETLKKLNAVQCLREIVSTEQETAA IERLVDELCEKLKDIEKRSQELNDEERFLIDTNLNIESLPTTSEGNSHQLTQEQDPKQ QQQSSVIGFDQQHHFCQQHILPASSSQVAASIAIHSRRLVPPSNENVLNDSDNDPKKR YFRAFPALSKEMEDSFRIWRRNAKSLTWPVVGRASSSIIGDTVRVHKSIDSSSGNLYA ESRSACEKGIEKRLKAASGGGVVDPVEGFQTHKIRPEVGAGDISSGSVVAVDAIGGEV QGAAASAKKKSKRRRNQALCKGKPIQSIRNKAPAGGSNSNTCGSASVATAGGGGGKFY SQHQNYRNTTPAWDTDFKGCWEMGPDLIKEFLARQKGATKRSRSNSDSLDQEMRNEYK MLNEMPKDDELLGGIERPLMKRYIDLTFCCGEDDERANYEVLEDGVDYVDEDYDDENT LASIEELTASGVGGGNGNARRLYQREGKLQKPLVICNPIEENDIFEETSDSVDNLDFA NFKAKFNSSVEALWKDAEPPMTNNSTANSSAYGQVESGVAAAAAAAKANTIGISSAFY ATTSLNALAPFKQDLWNFWSNYNQHHYDQMTKFSNTTSTASSMTMPTTTTRLDDSSAS SGAGADIANSSDYFSMPSNLDDFDKSVGAMRRVNEAGASMGAHTPSISVFLQNSIWSS SGDCVDAVGAAAAAETDESFLYKVWHSNKKLSQLDVGKNKNEKMAHMGMTEGDNGGNR GYNKAKEAVGNLESGGGAKLEFPPYSSLKWSEGINAGPAYNNLRSHMAAAHTDLESLN KNDGKIVSFNSAAGTVTGATWEAPAFGENSQPDLKSWCASNPMSLTEMYGSDVCDSIT EENEPLETGAMETSVTLPNHCSATSGFIAYSRVKQCGLIQPQSKPLQLQSANAAAAAA AHLSNDYFRGGEEENLLTSERTHFNPIETYVDGHTFNISSALDSVDFERSASGFLCYD SNEYLEYTRNDIYLADEEVANTNLMNFSATASSQITDGRVHVAKEKPECREMFVLKFR LRRSGEIACQTEEIDFQLAAAKMANDQLPPIESMVEVPMFSHTSLTLSRQANNEAIMA AVTKAVAAAAKAAAEQGLNAGHSSLAWIPATRNDCTQSWVQDVSLCDEVDFCRATASA EQLSQFWSMQEVEKQCHQRRLPASAFQRSDLERTDDNSMDNSSHTLWGMCAVCNSCDY GKSLPANRLLRDELQREADEIMSDLRYMQDLYIGEADSVADTVMAHEVEGDRNSEILK NIDNEREHHHHKQQQQQPNEASAAAVVDQAQASMLLKVNQLIEDLLRPEGKTAKLFKA KFEEKPETETPEKLPVADWAMNMDDDAVDNSSSWHFGGSGRADTADGHANLSNIWQHE PIDQNNTEAERKLVCMKPMKLLRQVGGSLNEEDLYVDNLNWEHENLAKIWQRDTMPSA DTTSSPNAAKAEHKLAQSEENLEDNRNIVEQKNLKNLQNNATHTPPTVSSSSNSNSNS AAVTYKRVQHFLNSSAAKLKLAANRKRRHSASQNFYHHQNQQQVQSQQEQNFQFGHSN SNNNNNNNNSSSASHNSNQISSNNNNNNVNITDLNRYKKTNEEELALSLEPKQTIITC KYWTTTTNGTQASMDSAAAAMMLLAAAANKSNVGGGSGGGIMATTNTTTTTSNTYEDT NDEGIMLEDNTFGNTFSCLIDKNASILKHVMMTRPLTR" polyA_site 8578 /gene="LOC106084312" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aactaattga aattgttcaa aaatattgca aaacaaacta catttattaa aaaataacat 61 taacgagtta aaacaagtgc atattttgga taaaagaaaa gaaatctaaa agaattaaaa 121 ctcaaagcaa aagtggaact ttaacttgga ggattcagtt tgtcaaatac tgaatgaaag 181 acaagccata gatatatgag aggacaacaa caacaacaaa agcaaaatcc acaaacaatt 241 tggggctaga aaataaacgc aaagaaaatc aaatcttaat ttttaaatta agagccaaca 301 aaaacaagaa aaacgagcaa aatggttaat taaaaaatta aaagaaaaca ccaacagcaa 361 aaatttgcat tgcaaacaat gcaaaaatca cacaagaaca accacaacag caacaatacc 421 accacaccat tctagaaaaa caaacatagc acagcaacaa ctgaaaacgc agacaacaac 481 aacaacaaca acataaagat aaattcgatt gcaacattgt attaagtttt cacctacata 541 acaacaagaa tccagacaaa gctagaccag ctcacccaag ccagaggaat agaataacac 601 ttaatggtgt tttaatagcc aacaagttta tctccccccc cgcctagtta attaattgat 661 ttctgaagtg aaaccagaga ttttgtcaac aatttttctg tctagctgag gccattgcac 721 caacaagcag catcctccgt caccactact gctactacat cataaaagtc gtggctttat 781 taattgtgct gggaataagt ttctgttgag gacacaccag caatgctcgt ggtcaagata 841 cacatccagg ccataagcac ataacgttag atgttgttgt tgtttcctta aagttttcgg 901 ttgaattttt taattttgtg ttaccacaat tttggtttgg atattttttt cctagcgaag 961 aagcagcaag cagtcataca accagtcaat ttagcctcca gtttattcta aaaggcggtg 1021 caagcagata ggcttaacca aaaggggaaa tcccacaact tgaaccaagg aataaacgac 1081 gaacacagat tgctaaaggg cggcttatat acacaaacag caacagtttg tcattatatg 1141 tatgtgagaa aaaatgttgc cgcataaact agaatatatt gggaaaaatg attcgctgaa 1201 catggaaacg ttttgggaag ctgctttgta ctccgttgct gcctctgccg ccgccgctgc 1261 tgttgtttca gctgaaagga ctgtcgctgc tgctgttgtt gatactgttt gccaagcata 1321 caaggcccac ttgctgccac caagtgttgc aatagctact cacagtgttg ctgcaaactt 1381 tgctcacacc acaacatatg acgatcaaca ataaatcaat cgaaagaaaa caaaaaacaa 1441 agaacgccaa aatccaatcc aaaatccaac aacaacaaca attaagaaga acatcattct 1501 gatacgcaag attttagaag aaaatcctta cagcaacaac aaaaaagcgt taatcaataa 1561 taataattaa aatataggca aaacaaaaaa aacgagaagt cacctttaac tcaaccaaaa 1621 agccaaaaca acaaaaaatt atatcacctt taaaacaccc cttcccctac acgagtaaaa 1681 ccatcactgg ttcacaagta attgtatatt tttttttgct cgcacaagta agtgagaaaa 1741 tcgaaggccg catttctcta catcccatta aaattattcg ggtagtaaag tatagaagct 1801 tgcagtctca agaagcagcc aacgaagatt atctagctgt gcagtttcaa aaaagtcaat 1861 cagtcagtct gtctgtcagc ccattgtgga caaaatcatt tttagaccct tcagctacag 1921 agatcatatg attttgttgt attcacaagg acttggacaa tttgttggca taccaacatc 1981 accctcacta cttggcagag aaaagcagga taatccaata cagcaatttc agcaaaattc 2041 ttgtcaaaag aacaggtatg aagtatcctc aactagtatc gcctcgtgcc gtgaacgcca 2101 tctctgattg gttagtatca cgtttggagc aattaggcgt cgaatcaccc cagatctata 2161 caagacttct actatctctc ttacaatcgt cagttcaagt aaacgatcca attgaattca 2221 gcaacttgga agcatttatc gctaattaca aaggtgggca tagcaaacgt tttcatttac 2281 cctccgatac ggagactcta aaaaaattaa atgctgttca gtgtttaagg gagattgtgt 2341 cgaccgaaca agagaccgct gctattgaaa gactagtcga tgaactgtgt gaaaaattaa 2401 aggatattga gaaacgtagt caagaactta atgatgagga acgctttcta atcgacacca 2461 atttgaacat tgaatcacta ccaacgacca gtgagggcaa tagccatcaa ttaacgcaag 2521 agcaggaccc aaagcagcag cagcagtcct cagtgattgg ttttgatcaa cagcatcatt 2581 tttgccaaca gcatattttg cccgcgtcgt cttcgcaggt tgccgcttcg attgccatac 2641 actctcgtcg tctagtgcca ccaagtaatg aaaatgtttt aaacgacagc gacaacgatc 2701 ccaagaaacg ctatttccgt gcctttcctg cattgtcgaa ggaaatggaa gattccttcc 2761 gcatatggcg tcgtaatgca aaatctttaa cttggccagt tgtgggacgt gcttcttctt 2821 caattattgg tgacactgtt cgtgtccaca aatccataga ctccagtagc ggtaatttat 2881 acgccgaaag ccgtagcgca tgcgagaaag gcattgaaaa gagattgaag gcggctagtg 2941 gtggaggtgt tgtcgatcct gtggagggtt ttcaaacaca taaaataagg ccagaggttg 3001 gcgcaggaga tattagtagt ggcagtgtgg tggcagtgga tgccattggt ggcgaagttc 3061 aaggagcagc ggcaagtgca aaaaagaaat ctaaacgtcg ccgtaatcaa gctttgtgca 3121 agggtaagcc catccagagt atacgcaata aagccccagc tggtggcagc aattctaata 3181 cgtgtggctc agccagtgtg gcaacggctg gtggcggtgg tggtaaattc tatagtcaac 3241 accaaaatta tcgcaacact accccagctt gggacactga tttcaaaggg tgctgggaaa 3301 tggggccgga tctgattaag gagtttttgg cccgccaaaa gggagccact aaacgcagtc 3361 gcagcaactc cgatagcttg gatcaagaga tgcgtaacga atataagatg cttaatgaaa 3421 tgcccaagga tgatgaattg cttggcggta tagaacgacc tttgatgaag cgctacatag 3481 atctaacttt ttgttgtggt gaggacgatg aacgcgctaa ctatgaagtg ttggaggacg 3541 gtgttgatta tgttgatgag gactatgatg atgagaacac tttggcttcc atagaagagc 3601 tgacggccag tggtgttggt ggcggcaatg gcaatgctcg acgtttgtat cagcgtgagg 3661 gtaaattgca gaaacctctg gtgatttgca accccataga agagaatgac atttttgaag 3721 agacctcgga ctcggtggac aatttagatt ttgccaattt caaggccaaa ttcaacagca 3781 gcgttgaggc tttgtggaaa gatgcagagc cgcctatgac aaacaactcg acagccaact 3841 ctagtgctta cggtcaggtt gagagtggtg ttgccgctgc tgctgctgct gccaaagcca 3901 acacaattgg aatttcttcg gctttttatg ccaccacctc gctaaatgct ttggctccat 3961 tcaaacagga tttgtggaac ttctggtcca actacaatca acatcactac gaccagatga 4021 cgaaattctc caacaccact tcaaccgcat cgtccatgac gatgccgaca acgacaacac 4081 gtttagatga tagtagcgct agttctggcg ctggcgccga tattgcaaat tcaagtgatt 4141 acttctcaat gcccagtaat ttggatgatt tcgacaagtc tgtgggtgca atgcgtcgcg 4201 taaatgaagc tggtgcttcc atgggtgccc acacaccctc gataagtgta ttcttgcaga 4261 attccatttg gtcctcatcg ggtgattgtg ttgatgctgt tggtgctgcc gctgccgcag 4321 agacggatga aagcttcctc tacaaagtgt ggcactcgaa taagaaatta agtcaattgg 4381 atgtggggaa aaataaaaac gaaaagatgg ctcacatggg aatgactgaa ggagataatg 4441 gtggaaatcg tggctataat aaggctaaag aagccgtagg taacttggaa tcaggaggtg 4501 gtgctaaatt ggaatttcct ccttacagta gtttgaagtg gtcggaagga atcaatgccg 4561 ggccagctta taataatttg cgctctcaca tggcagcagc ccataccgac ttggagagcc 4621 taaacaaaaa tgatggcaaa attgttagtt ttaattctgc tgcgggcaca gtaacaggtg 4681 ccacctggga agccccggcc tttggggaaa actcacaacc tgacctcaag tcttggtgcg 4741 cctccaatcc catgtccctg accgaaatgt atggcagcga tgtttgcgat agcataactg 4801 aagaaaatga gccgctggaa actggggcta tggaaacttc ggtcacattg cccaatcact 4861 gctctgccac cagtggtttc atagcctatt ctcgcgttaa acaatgcggc ctcattcaac 4921 cccaaagtaa gcccttgcag cttcaaagtg ccaatgctgc tgctgctgct gctgctcacc 4981 tctccaatga ctactttcgt gggggtgaag aggagaacct tttgacttcg gagcgcacac 5041 attttaatcc catcgagacc tatgtggatg gtcacacttt caatattagc agtgctcttg 5101 attcggtgga ctttgaacgc agtgccagcg gatttttgtg ctatgattcc aatgaatatt 5161 tggaatatac tcgcaacgac atctatttgg ccgacgagga ggtggccaat acgaatttga 5221 tgaatttctc ggccaccgct tcgtctcaga tcactgatgg ccgcgtacat gttgccaaag 5281 aaaaaccgga gtgcagggaa atgtttgtgc tgaagtttcg ccttaggcga tcgggagaga 5341 tagcttgtca aacggaggaa atcgactttc aattagccgc cgccaaaatg gccaacgatc 5401 agctgccacc cattgagagc atggtggaag tgcctatgtt ttcccatacc tcgttgactc 5461 tgagccgaca ggccaacaat gaagccatta tggcggccgt taccaaagcc gtggctgccg 5521 cagccaaagc ggcagctgaa cagggtctga atgcaggtca tagttccctc gcttggatac 5581 ccgccactcg caacgattgc actcagtcct gggtgcagga tgtctcgctc tgtgatgaag 5641 tagatttttg cagagccaca gcctctgccg aacaattgag ccaattttgg tccatgcaag 5701 aggtggaaaa gcaatgccat caacgccgtt tgccagccag tgcttttcag cgctccgatc 5761 tggagagaac ggatgacaac tccatggata actcctcgca taccctgtgg ggcatgtgtg 5821 ctgtatgcaa tagttgtgat tacggcaagt ctttgccagc gaatcgtctg ctgcgagatg 5881 aattgcaacg ggaagccgat gaaataatga gtgatttgcg ttatatgcaa gatctgtata 5941 taggtgaagc cgattcggta gcagatacgg ttatggccca tgaagtggag ggcgatagga 6001 atagtgaaat tttgaagaat atagacaatg aaagggaaca tcatcatcat aagcagcagc 6061 agcagcagcc gaatgaagca tcagctgctg ctgttgtaga tcaagcacag gcctcaatgt 6121 tgttgaaggt taaccagttg atagaggatt tacttaggcc cgagggaaaa acggcaaagc 6181 tcttcaaggc aaaattcgaa gaaaagccgg agacggagac accagagaaa ttgcctgtgg 6241 ctgactgggc catgaatatg gacgatgatg ctgtagacaa ttcaagttca tggcattttg 6301 gtggcagtgg cagagcagac actgccgatg gccatgccaa cttaagcaac atttggcaac 6361 atgaaccgat tgaccagaac aacactgagg ccgaacgaaa acttgtctgt atgaaaccca 6421 tgaaactatt gcgccaagta ggaggttccc tcaacgaaga ggacttgtat gtggataatt 6481 taaattggga acatgaaaat ctggccaaga tatggcaaag ggatacgatg cccagcgctg 6541 acacaacttc ttccccaaat gctgcaaaag cagagcataa attggcccaa agtgaggaaa 6601 acctggagga taatcggaat attgtagagc aaaagaattt aaaaaatcta caaaataatg 6661 ccacacatac accacccaca gtttcttcaa gtagcaatag caacagcaat agtgccgccg 6721 tgacatacaa aagggtgcaa cattttctga atagttcggc ggccaagtta aaattggcgg 6781 caaatcgcaa gaggcgtcat tcggcttcgc aaaatttcta tcatcatcaa aaccagcagc 6841 aagtgcagtc gcagcaagag caaaattttc agtttggcca cagcaatagc aacaataaca 6901 acaataacaa caacagcagc agtgccagtc acaattctaa tcaaatcagc agcaataaca 6961 acaacaataa tgtcaacata accgatttaa atcgctacaa aaagacaaac gaagaggagc 7021 tagcactatc tcttgagccc aagcaaacaa ttatcacctg caaatattgg accaccacta 7081 cgaatggcac ccaggcctcc atggattccg ctgcggcagc catgatgctt ttggctgccg 7141 ctgcaaacaa atccaacgtt ggcggcggca gcggcggagg cattatggca accaccaaca 7201 ccacaacgac cacctcaaac acttacgaag atactaacga tgaaggcatc atgttggagg 7261 ataatacatt tggtaatacc ttttcttgtc ttatcgataa aaatgcttct atactgaaac 7321 atgtaatgat gacacgaccc ctaacacgct aaacaataat acaaaaaaaa aaatgcaaat 7381 gtaaatgcaa accatattct gaaactccca aagtccccaa aagagaaaca aaagctacaa 7441 acttaagcgg cctatggaaa gagaaataga aaaaaagaga gagagggggc agccaaactc 7501 agaatccaat atgatgccat aagccaagcc cttaaattgg catgttgtag ggaggtcaat 7561 ttttgagcaa agaatccaaa tccaaatcat gttttatatt cctactaaaa ctttctacta 7621 taagagcccc ctctctacaa tagccgcttg ttataaactc ttaaaaaatt ttaaaaaatt 7681 caaaaaagcc aaaaaaataa caattgtgga gtacaatgta cttgtgaaca atgtaaaaat 7741 ccccaccccg ccctcagcgc cccagctccc ttcaaaatca acatagaaaa acagaaaatt 7801 ttacttcaaa tgttcagctc ataaatattt ttctaaaaaa aagctacaaa aaaaacaata 7861 ctttaggttt ttcataacac tctcttacaa gcatccccct ccccacacaa acatgtatat 7921 tgaaactttt ctaatctgtt ttgtttttct ttttttttgt ttaatgttat aaattttctc 7981 tgtataaaaa aattcacagt aaatagtaac tttttctttt ttgttgttct aaagaagaaa 8041 tatttactct tttttatctc ttacaacata cccatataca tatacctact attattattt 8101 gatgtaccat acatatacta ttattatatg cggcttattt tcttgtaatt tcgtaattta 8161 taacagattt ataaaatttg ttttctctat tttccccctc ctccaaaaac cactctattg 8221 tcccttgaaa agaaaaaaaa actcaaaaaa aaaacatgtt aggttgaaaa aaattttttt 8281 tttaaataat ttttgttgtt aagataactg aaatggaaat tttgcaaaga aaaactaaat 8341 gttttgttca caattttcac aacaataaaa gaaaaggaaa caaacaaaag caaaataaaa 8401 aatatcatgt gtaaagtttg aaattttttg aaaaaaacgg aaccccccca aaaaaagcaa 8461 tttcacctaa acacactcac acctacacaa cagcaaaact caaacaaaga aaacatcatc 8521 atcctgaagt aaaataaagg attaataaaa aaaaaatcat aaaaaaatca aaattaaa