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LOCUS XM_059368356 8168 bp mRNA linear INV 02-SEP-2023 transcript variant X4, mRNA. ACCESSION XM_059368356 VERSION XM_059368356.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8168 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..8168 /gene="LOC106083906" /note="protein TIS11; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:106083906" CDS 16..1440 /gene="LOC106083906" /codon_start=1 /product="protein TIS11 isoform X4" /protein_id="XP_059224339.1" /db_xref="GeneID:106083906" /translation="MVWRWLNKNIDKPLQNHHNHHMSNGHINGGSSLSELNIMDINCS NNSSMDHMDQMDQLQQQIQHNSTTSNTNAQTKALNHQYRIHAALTRTISTPQPQIKPP HHLSTLQQHQTQAQSQQQHDPNVAMVNTLIENLGNINLHRKLERTQSEPLPQQVNASR YKTELCRPFEEAGECKYGEKCQFAHGYHELRNLQRHPKYKTEYCRTFHSVGFCPYGPR CHFVHNADEARALQQQQQQQQQQQQQQQQQFQQPQQQTKLQNHSNYYINNPLSAKSSL NGGAVATAAAAGGINHSLPLSPPLSMSTGSDRESPTGSLSLSPTSSMTNFTFGEQISP ANSVFQISFNYGSTPPDSPNEPMSPVNTPPPTHILGAIYSKPLVSNNTNGSGGQVVAA AASSSIAPPCKQLLQKSSSSPIAILRNPNAGVGVGSGATKTTTPTKVNSVSSLNGAVA ADEARLPVFNRISSVADTFPHVAL" polyA_site 8168 /gene="LOC106083906" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cagtgcaatt gttgaatggt gtggcgttgg ttgaataaaa acattgataa acctcttcag 61 aatcatcata atcatcatat gtctaatgga catataaatg gcggcagctc attgtccgaa 121 ctcaacatca tggatattaa ctgttcaaac aactcctcaa tggatcatat ggaccaaatg 181 gatcagttgc aacaacaaat tcaacacaat tccaccacat cgaacacaaa tgctcaaact 241 aaagcgctca atcatcaata tcgcattcat gccgctttga ctcgcaccat ctctacgccc 301 cagccgcaaa tcaaaccacc acatcatcta agtacattgc aacagcatca aacacaagca 361 cagtcacaac agcaacatga tccgaatgtg gcaatggtga ataccctaat tgagaatttg 421 ggcaacataa atctacatag gaagctggaa agaacacaat cggagccatt gccgcaacag 481 gttaatgcat caaggtacaa aactgaactt tgtcgcccct ttgaagaagc aggcgaatgc 541 aagtatggtg aaaagtgcca gttcgctcat ggctatcatg aattgcgtaa cctacagaga 601 catcccaagt acaaaacgga atattgtcgc actttccata gcgtgggctt ttgcccctat 661 ggaccacgtt gccattttgt gcacaacgct gatgaagcgc gagctcttca acagcagcaa 721 caacagcagc agcagcaaca acaacaacaa cagcaacaat ttcaacaacc acaacaacaa 781 actaaattac aaaatcattc caattattat ataaacaacc ccttgagtgc caaatctagt 841 ctcaatggag gagcagtagc aacagcagca gcagccggcg gtatcaatca ttccctaccg 901 ctaagtcctc ccttgagcat gtccaccggc tccgatcgcg aatcaccaac tggctcattg 961 tcactttcgc ccacaagttc catgacaaat ttcacatttg gtgaacaaat cagtccagca 1021 aattccgtgt ttcaaataag cttcaattat gggagtacac cacccgatag tcccaatgaa 1081 cccatgtcgc cagtgaacac accaccaccc acccatatct tgggtgccat atatagtaag 1141 ccgttggtgt ccaataacac caatggtagc ggtggtcagg ttgttgctgc cgctgccagc 1201 tcctcgattg caccaccctg caaacaattg ttgcagaaaa gttccagctc tcccatagcg 1261 attctgagga accctaatgc cggcgttggt gttggcagtg gtgccaccaa aactactact 1321 cctaccaaag tcaactctgt gtcatcgttg aatggtgctg tggcagccga tgaggcacgt 1381 ttacctgtgt tcaatcgcat tagctcagta gcagatacat ttccccatgt agctttataa 1441 acatctctgt aatatagtag tttaatttga tcatatgcat actttcaaac atatatgtaa 1501 caaagaacat aacgcgtgcg caaacctgct tgcgcgttga cccagcaact taccaacaag 1561 cgacaaagaa aaaatctcaa taatttcaca cccccacacg acgcatacaa atatttaatt 1621 gaaaccagag acaattaaaa attctagttt tttttcttta tgcatattaa tattaacgaa 1681 aacaaaaaat cttttatgtg taattaatta taaaataact acttttttac ttttttatgc 1741 tatcatctct attttttaat gtttttatcc atatgcatat atattttaca cagacacccc 1801 tatctatatc tatcaatcta acttttatat acatctacat attttgttat ttaacaacac 1861 aattcattta tttaaacaac aacaaccagt acagacagaa ctaaccacca aacaactaac 1921 cgacaaccat ttaacaacaa tcagcataga cgtacagaca gcagacagag acagacagca 1981 aataactaaa aaaaatcatt aatttatata catatctata aaacaaaaac aaaactgata 2041 tttgcatatg cacacttata aaagaaacaa caacgacaaa ctgctaaaaa atgtactaaa 2101 ttattgaaac tattattgat gaaaaatgtt aagctgtttt gtttttgctc tgcaaagtag 2161 cttttgatat ttatcatgcg ataacatggg gagcacttgc atattgctgc tccatataaa 2221 tacctagtat ttaaaaaaat ttgtaacggt ataatgcttg gtttgtttgt ttgtctttcc 2281 atgttgcgtc tatacgtgct atcggctggc gtcacatgaa atcgataaca tttttagcac 2341 tatgccatac aaaggcgtgt tatcgttttc acatgtaatc gaaagcaaag ttacattgca 2401 gtgcaaaact aagacaacta ctctgttata actattatgc aaacattaac attcatacaa 2461 catattatag aaaaatatcc atacaaacaa cattgtatat gtaaacatgt atacacaagc 2521 acacgcaaca ttttaacttt atatatacat attacttatt ataattattt aaaacaaaaa 2581 aaaaacgcaa caatttgatt atttatctca aaaggaaaaa aaaacaagaa aacacactac 2641 tattataatt atatactatt attatattta ctatttataa tttatatcta tatatatata 2701 tacatacaca tatttaattt tacacataat tatccataaa agtggatatg actttttttg 2761 aaaaaacata tacctatttt taaacaaatt atttaaaaga aaaacaaaac caacataaat 2821 acacaatgta aatgtaaaac ttctggctgg gttgctttat gatctaaacg atgtaaaaaa 2881 gaaaaaacaa aaaaatgttt gcatttatta aaattaatct ttttatttat tttttttttt 2941 cttccttctt aacttatttc ttagacaaac aaaattttgt aacttaacaa aaaagcgtta 3001 aagaaaagac attcaaacaa aaaaaaagac cagagaatat aagatcttga aaagaaaagc 3061 aaaaaaaaaa aaacaaattt taagacaaat cattagatgt tttcaaaaaa gcaatggagt 3121 gatatttttc aaaaaaacaa aaactcacaa aactaaatgc ctaaataaaa taagcacaca 3181 tattaacaga ctttaaaaag agagtgagag agagagagaa aaaaaaaaac aaacaacgag 3241 ttgttaaaat atcaaaagaa atagttgtca tattgtgcca aaattataac agaaacagtt 3301 tatttcctcc ctcatatccc tcaaacaaga attcactaag ggaaacatct tattttaata 3361 acatttacca acactaagga gggaaatatt agttgtctcc atttccatca taccaggaac 3421 atgaatattt taagagttaa aaaaaaacac cacattgaaa agaaaaagta tggctaaatt 3481 accgcaaact tcatttctga atactgaaca cttcaaattg ttttaaaatc gagcttaaca 3541 ttaagggccc gttttttttt aaaaagctta atgaagcctt ataatcagtt tacacatcat 3601 gatacttggt cattgtaata atattggtga aatgcgtcac atggccgaaa aatctaaatc 3661 atttgatttt ttcaatgact gtcgtctatc gattaccatt tacacagaaa tgtgtaatca 3721 ttaattgaca gctgttgaaa aatatgttct ggccaaaatc aaattataaa aagagaagaa 3781 aagtttggaa agtaaaataa aatcaaagaa aagaaaaaaa tctatacaga tgatgagtac 3841 gatcatgatg tgacgcataa actgccaatt attataggtt tatttaacaa ttctataagg 3901 gaactctctc caagaaatca attccgattc tacattaagt tttgtatata acggtataag 3961 aacacattgt tcgagaatta taaaaggtga tgaaatgtta agggccgatg ttgaatgtca 4021 aaccaccata tgaaatgtca aattttttct ttctgaattt cagactaact caatttaaac 4081 catgtaagga tacacaattg agcaatgcgt ttaagctttt caaaatcaac atcttcgctt 4141 taaatgtaac caccctttat atagcagata gttaaagcat attttgccca ataagggtat 4201 agtctgagaa acttttgaga gcttttgggt ttgatgttaa ccagaatgct ttttatcatc 4261 ttatttattt attggatcac tagtaggcgg caaatgggtt tgcctatgca ttcgaacagg 4321 gtagcagctc gttctatcgt tgtgtaacca aaggggcaat ttgatacttt ttataaaggt 4381 ttgcccattt tagtgaccct tttttgacaa attatagctc gagtaaggaa atgcaatttg 4441 gattgtcata aagtggatga atgaaactag ttaaaaatat tttgccgtca tataaggtca 4501 tgttttgtag aaaattggct tgtcgaaaac cagctgtaaa aattgctcaa aaattctaaa 4561 aaaatatata tgaatgagat ttctggaaat cgttctagta tcttttagca tttaatggtt 4621 tctgtattat aaaaaacatg gcgataagct taccactttt gggaaaagtt gcgattttat 4681 gtgaaagtca acaaaatcca cttttcttcg ctaaattgtc ataaaatatt aagtaaacgt 4741 ttggtttttt gtttttgtaa acaatttgtg gctgggataa taaaaaaaat ttatttgttt 4801 aaaatttttt gaaaaaatta aaatttcttt ttttaatatt taattttttt aacttaagat 4861 tttaagattt atatttcaat tatttttgtt tttttttttt caatttaaat acaatttttt 4921 caagctttaa aaaagtattt ttggtaaaaa ataattaaat taaaaattct tcaatttttt 4981 atatttaaaa aaaatttaac aaaatgctac ctcaacataa ttagccaaaa taatcaatat 5041 attaaatttc tcaatcgagg gtctggcgtt ataatggttt aagaaaacct ttcaaaattc 5101 tatttgcata gaaaatttct taattatata tatatatttt aatattactt tttttaatcc 5161 cttaacttct gacccttgat ttccttttaa ttatttaaag catttatgtt ggcttagtat 5221 tttttttaaa tactgaaaaa aattaaagca aagcaaagga aagttgtctg tagcccaaaa 5281 tagtaggcct atcgtcctta atgttttttt ttttctaata tctaaccctc aaaaactaca 5341 agaaaactcg aagtttccag aactttacac ttgcaagaat tttaaaaaga ttttttattt 5401 gaattttgga gctttgcaaa attgctaact tttaccaaga aaataacctt ataggacaag 5461 acataaattt gtttaactag tttcattcgt cctattgcaa agccactttc ccaacttgag 5521 ctagaatttt gcctaatcgg cgttaatggg ataattatta tctttttatt tttacttaat 5581 cattttggta aaattttgaa aaatattatg ttttgtgacc ctttacttaa aaaatgcatt 5641 ttcccctttt tgcaaagttc tgaacggtaa cccagcaggg taaccaaatt attatgctca 5701 tacgcctaaa atagcctttt tttgtatggt ttatttaatc gatggcaata tttaaaaatt 5761 aaacctgttt tcatatgtat ctatttcgcc gccaaattgc cagttgagtg gcaatacctc 5821 acattttttc caaaactaca aaacaaactg tggtaacaag aaaaaaagcc gttatatctt 5881 gagtagtgat ggacattcta acacataggc ccagtattgt caagcccatg ggctaatgtt 5941 cttttgcacg tgtacaaaag tgtgtgtgtg tatgtatttg ctcatcactg atctggagcc 6001 atcaacggcc ccgaacttag ttgcagtgaa aactgtattg ggttgcttga gagagcaaaa 6061 tttttgaaat tgtctgtgaa acattctcag tatctcattt accttagttg ttgttgcgca 6121 taagtatgaa ttggcaatat tcaaaaaatg aacttgtttt catatgtccc tattttgccg 6181 ccaaattgcc agttgagtag caatacctta gattttttcc aaaacaacaa aacaaactgt 6241 ggtaacaaga aaaaagagca gtgatgggga ctaacacata ggcccagcat tgtcaagccc 6301 atgagctaat gttcttgtgt gtggtgtgtg tgtatttgct catcattgat ctgaagccat 6361 caacgccccc actcagttat agtgaaaatt gtatgggttt gcttgagaga gcaaaatttt 6421 taaaattgtc tatgaaacat tctcactctc tcatttacct tagtggttgt tgcgcataag 6481 tatgcattgc aatcgcaaag cccatcacaa gacatattgg ttggccgaaa tttcttgttt 6541 gtataggtaa ttttgtatac ttttcacagc atatgaatgg ggaaaccctt taatgatgag 6601 tacacaaata agaacctctt tcataagctt ggtatatgta ttttaaaata agaaaacagc 6661 tgatttgtat acctcaagcg gacaaaaggt atttgtacaa gggcaactta gctttggtag 6721 aaacaatgag ttgtttaaat tcttaaaata ttcttttcca gtatctggta tgactgtggt 6781 ggactacatc atatttagtt tctgtaacct cccgttatat acaccaacga aaacaacatt 6841 gtaaattttg ggcctttgtc tcgctatcta atgaaagcat tgttaacaat taagactttg 6901 gccagttaat ctgcaatatt tccttaaagc cttggactgg aaattcacac catacatgcc 6961 caaatgaaag tactttttaa tgaatatgcc ttatatacat taatatttat aatattaaaa 7021 ataaaatacc tctgaacatt taaaattaat tttctatata tatttttttt aatttaatta 7081 tttaattaaa aattgttttt ttgttttgct atatgacaaa cttgataata ataataaaaa 7141 aaaagatttt tatgaacaat ttcgtatgag acttcttagg tgcgtacaga gtcaattgct 7201 tactattatt ttcgcttgtt tttataaaaa aaaattgtaa tttttaaaat ttctaaacta 7261 aagttggaat aaagaaaacc acaaatcatg atgtatataa acaaatcaaa tgaaattgag 7321 aataaaaata gaaatctgta acgaagaaaa agaacacaaa caaaaacata tgtaatttaa 7381 aacaaaaacc ttaatttaaa tgaaagaata atttattttt ttattaacta aattatataa 7441 atcacacaca accacaaaca aatacatata caaaatatta tatatgtacg ttattatata 7501 tatattacac tattttctat aaatttagaa taaaaacaat ggcaattatt taaagaatga 7561 gtttattttt ttttataaaa catacaattt gtcctttccg tttttatttt atattttaaa 7621 ttgagcaaag tttcattttt tttaattttc tatttccagc attcacattt catctaaatt 7681 aaatatttac tttagtaata ttttttttta aatcatatgt cttagtctat tatatttaaa 7741 agtagaggaa aacatgtata caacaataag aaaaaaccaa taatttgtca ttgaaaaatt 7801 ctcaagtgcc ttaataatgt tttattatta ttattttttt ttaattatta ttattattaa 7861 ctatttatat gtaatttaat ttgattggtt taattgaata ttattttgtt tttattttta 7921 caatttacct tttttagtta tttaaatgga tttagtcttc cccactctaa tttttattat 7981 attatatttc taatttatat ttgtattttt ttctcccttg acatagtaat acaatacgcg 8041 ccagttcgag ataagtcgtc agtagtcttt actatgcact gtgtttaaaa atacaaaata 8101 aaaaaaaata cgaactatgc ttccatttta catattttta caaataaaat cgaaacattg 8161 aaacgtaa