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LOCUS XM_059368333 8484 bp mRNA linear INV 02-SEP-2023 (LOC106085140), transcript variant X6, mRNA. ACCESSION XM_059368333 VERSION XM_059368333.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8484 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..8484 /gene="LOC106085140" /note="uncharacterized LOC106085140; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:106085140" CDS 598..2802 /gene="LOC106085140" /codon_start=1 /product="uncharacterized protein LOC106085140 isoform X3" /protein_id="XP_059224316.1" /db_xref="GeneID:106085140" /translation="MTTASMYASTPAMICLAQGIVSSELLLTQQQQQQDQQMKSDFPA TNTNNEQPEVPFRQKHQQHQHHHQLPSKQIQRKFSDSTVPPRSSVIYNRSNSTNTYAL DSSGNQGNSSRHRKILIKARSTSSVSTLAQLPTDSLGSSSMAPLQTHTEAQSVQCLNS TQSYDHQDSHSPTQATKRSHLQHQQSIAESLESTSIGCATSSEYSSARSLKHSTTSLA PLQSVPSSTSLRSISPSRRSASSNSSSTAKHEQSPAANTAAGAAVAAATTSAAIASGS SSGQNITPPEKEKKRKEVSSSRVKKFQRHFSQVSQDEKLINYFSCALVSDILLQGHLY ITDQHFAFYSNVFGYVTKVVIPTSSVTKISKEKTAKIIPNAVGVATADERHVFGSFIS REAAFRLMCSVCPPLDALETLVKDPASIEISEEYSVEDDSSCSISGNESPAQATDNAN STHDNSQTILRRSVANSSLSIADSSAAHKQRHSDIPLNAKTANNNAAFSRASAPPVPG LASAAATAHYANGGSGAVSGHATVAGGGGIGHVIVSSINGPATAIGCPSLEGATNLTF IAGNASTTTSATSTPTPSTSSSPTTVMALPHTKAYQILNKFRTLSNKLLVNLKFPTEI HVVYLGAMLTVLLAVFTIFLLYRILDIEAKTNVYRSPIEFKWQSANDDDIFAEALRFQ KQLQVKSTEEAQNILKTNLEQIAKVRRSLETLSMLIHDRSSSFDSTNPDDSD" polyA_site 8484 /gene="LOC106085140" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gctgttgatg tgtaacgacg acgaagaaga cggcatacga gaaaaaagca tcaaaacaaa 61 aatgacgacg ggttgctaaa catggtattg caagtgcaaa cataatgtgt gtctaaataa 121 cggcatcata attaaatatc aaacgaattt ttttttaata aaattcagtg ccaaaaatgt 181 caataataag aaaacgtgac tacaaaaaca aaaatataaa tcttaaaaag ttaatgagtc 241 atgtattgaa gaagaagtga atacaaaaat cactttcaaa accacacgag aaaaaaaaat 301 aaaataaaat tccccaaaaa accccaagtt gtgtgctgct gtcttatgct attgggcagt 361 ttcttttaaa atcttacgat gctcatcgcc tgagtttgac tgagtcactt gttgaagata 421 atttgttata agagtgtctc aatagagagc aacaataaca agccgcctac gcctaactaa 481 cttggtcaat taactttcat aaagacgtgc gtccgtccgt gtgtctgttc ctcactaacg 541 gatcggcaga agtaccgcac acgcgtcaga aaaccttgct gtcccaaaaa gatatccatg 601 accaccgcca gcatgtatgc cagcactcca gccatgatat gtttggccca aggcattgtc 661 agctcagagt tgctattgac gcagcagcaa caacagcaag accaacaaat gaagtcagat 721 tttccggcga ctaatactaa taatgaacag cccgaagtgc cgtttcgtca aaagcatcag 781 cagcatcaac atcatcatca gctgccctcg aaacagatac aaaggaaatt tagtgattcc 841 acagtgccac caagatcatc agtgatctac aatcgttcga attcaacgaa tacttatgcc 901 ttggactcga gcggtaatca gggcaacagc agcagacata gaaagatact aataaaagca 961 agatcaacca gcagcgttag tacacttgct cagttgccca cagacagtct tggctcttcg 1021 tccatggccc ctttgcaaac acacactgag gctcaaagtg ttcagtgttt aaattcgaca 1081 caatcgtacg accatcagga ttctcatagt ccaacacaag cgaccaaacg ttctcaccta 1141 cagcatcagc agtcgatagc ggaatcccta gaatccacgt cgataggttg tgcaacgtct 1201 agtgaatatt caagcgcaag atctctcaaa catagcacca catcgttggc ccccctgcaa 1261 tcggtaccat cctcgaccag cctgcgcagc ataagtcctt cgcgtcgtag tgcgagtagc 1321 aacagcagca gcacggccaa gcatgagcaa tcaccggcgg ctaatacagc cgccggtgct 1381 gctgttgctg ctgccactac ctctgccgca atcgcctctg gttcaagttc gggccaaaat 1441 atcacaccac cggaaaaaga aaagaaacgc aaagaggttt catcgtctcg ggtaaaaaag 1501 ttccaaaggc atttctctca ggtgtcgcaa gatgagaagt taattaacta tttttcctgt 1561 gctttagtca gtgatatatt actgcaagga catctgtata taacagatca acattttgca 1621 ttttattcca atgtttttgg ttatgttact aaggttgtta tacccacatc gtcggttacg 1681 aaaatttcca aagaaaaaac cgcaaaaatc ataccaaatg ctgtgggtgt ggccaccgcc 1741 gacgaacgcc atgtctttgg cagtttcatt agtcgcgagg ctgcctttcg tctgatgtgc 1801 agtgtctgcc ctcccctgga tgcccttgaa acgttggtca aagatccggc gagcattgaa 1861 atctccgaag aatactcagt tgaggatgat agcagctgtt ccataagcgg caacgaaagt 1921 cccgctcagg ccacagacaa tgccaattca acgcatgata atagtcagac gatattaaga 1981 cgttccgtag ctaattcaag tttaagtatt gccgatagct cagcagccca taaacagagg 2041 cactccgaca ttccgttaaa tgccaaaaca gcaaacaata atgcagcttt ctcaagagct 2101 tcagctccac cggtgccagg gttagcatct gcagcagcaa cagcccatta tgccaatggc 2161 ggtagtgggg ccgttagtgg tcatgcaaca gtcgccggcg gcggtggcat tggccatgtc 2221 attgtgtcct ccataaatgg gccggcaaca gccataggct gtcccagcct tgagggcgcc 2281 accaatctca cattcattgc gggcaatgct tccaccacca cctcggccac ttcaacacca 2341 acaccgtcga cctcatcgtc gcccaccacc gttatggcat tgccacatac aaaagcttat 2401 caaatcttaa ataaatttag aacactaagc aacaaactgt tggtcaatct gaaatttccc 2461 actgaaatcc atgtggtata cttgggcgcc atgctcaccg tattgctggc tgtattcacc 2521 atattcctat tgtatcggat attagatata gaagcgaaga cgaatgttta tcgatctcct 2581 atagaattta aatggcaatc cgccaatgat gatgatatct ttgccgaagc attacgtttc 2641 caaaaacaat tgcaagtgaa aagcactgaa gaagctcaga atatacttaa aacgaattta 2701 gaacaaatcg ctaaggttcg ccgcagttta gaaaccttat cgatgttaat ccatgaccgt 2761 agctcatcgt ttgattccac aaatcccgat gatagtgact gaatttatat tttgtaatta 2821 gatttattgt ttttcttttt ttttcttcta attttttgtt tcttttctat ttttaatttt 2881 tttttattag aaaacaagaa aaacttggcg aagtttttcc tagttaatta ttataagctt 2941 agcaatgaag gcgttagaag tatgtatgta ccatatgctt aggatcttgt aattagatat 3001 ttattactat tattattatc acctttttat attattgaaa tattccataa cttagttttt 3061 gggtgaattt tttcataaac ttccataagt gtgttaaaac ttctaactaa ctccctcatc 3121 ccattcttgt aaatctaaaa atcaaatgaa ttgattttgc tgaaaaggga aacaagggga 3181 ttgcaaaaaa ggttttgctt tagttcttgt tctaaaaatt tatgaatttt ttttttaaga 3241 atatttttgg aaatttttta tttaaaaatt tccacaaagt tttcggaaaa aaaccaaacc 3301 atataaaaca atttgttttg tgttatttat tataactttg aaaactgtaa tactatcata 3361 actttgaaaa ctgtaataat cgaatgttaa ggttaaaagt ttaactttat acctctttaa 3421 aaaaaaaaag taaaaattct aagccaaagg aaactaattt aaatttggaa atttattgaa 3481 atattttttg taaaacaaat attatgaaaa aataaaatga ataagcttta atgactctga 3541 aaagagctaa tttctctcta aacaaatgag atttcttata tccaagttga ttgaaattta 3601 aaaaatttaa tttcacttgt tctattaatt tttgaaactt ttaagggaaa taacttaaca 3661 taaaaaatat gatttcaacg aatttagtta ctacaagtat tctatattac caccaaagag 3721 ttaaaatgtt tagggtgaaa tgtgttaaag gaaataatag aatgatctca taaaagaaat 3781 tccactatca aaaaatttct aataattatt aacccatcta aagtgtagaa aattaaatga 3841 gaacaaagtt ttagtttaaa ttattttttt tttgccgata atgattctta aaacctttgt 3901 gaaacactat gcaaacataa caaaatatgc taaatactta caatgtatac agtaatcaat 3961 gctgaaaatg tttataattt ttaatagcaa ttatggggta aatctgcttt agcataggca 4021 aatgaattga tgtggcgttt aatttttgga aaccaatatc tagctgacaa cagcctttct 4081 ataaatgtta cacatgttta tgtgtgcagc agtttttttg aacacttttt gttaacgtgg 4141 gcaaatgaat tgatttggaa aaactgtttt agacaaaatt ttttgctaca gatcctcttt 4201 ctaaattatt ccatattaat tatatgtgca agcatgttgt aagctatttc tctctaattt 4261 caacatataa attgatctat gaacacagcg ctaagaatga attaagtgaa ttaagtcacc 4321 taatacaagc aaaagaattg atctaaaaaa gccaacaaat aggaaatata ccacaaaata 4381 cagccactca agatatacta cactacttca tgaatgcagg aattttcaga aagaaccaac 4441 tattaagtga gtaaatgaat tgatgttgaa aagtttataa agacaggata ttgtattgta 4501 gatgcccctt ccagaattat taaagtagtc tatgtgtgca aacgttttct caatatagct 4561 tagcttaaca ttagccaatg agttgatgta ggaatacaaa gcttacgaga attttcaaaa 4621 agaatcaact ataaaattag taaatgaatt gatgtggaaa aatttataaa aacagaatat 4681 tatgttgcag atgctccttc ctaatttatt aaagtagtcc atgtgtgcaa acatttttcc 4741 aatacagctt aaaataacaa tacctaatga attgaagtag taataaaaag cttacgagaa 4801 catcttgtaa aacactatct ttctaaaatg attaatttgt gctttaattt tctgaaacga 4861 ctttctataa caagaattaa cgaattgatg tagcatatct tactaaatac cttctttcta 4921 gattttttaa atttcttgat tttgtgtgca accgattttt tgtaaaaacg gttgaatata 4981 atacaggtaa acgaattgaa cttgaaaaac tgaattgagc aaatgatatt gttttagata 5041 atctttctta aagttttgag atggtttacg tgtgcaaaga tttttgaaat gaacttgctg 5101 taatacaagt aaattaatta atctacaaaa attaaattga acaaaagata ttgttttaaa 5161 tactttttca atatatgtta agctccatga tatgtgatta catttttgaa taaagcctcc 5221 ctaacactgg caaatgaatt tatctaagta aacaaagctt aagagaaaat ctgactttct 5281 ataaataatt agcaatttcg acctcacttt tttttgcata ttttggatat caattatgcg 5341 attatgagct tgttttttga agaatcaaga ctgcagttgc gcttaacctc atttttcacc 5401 ataaacttta acgctgcata ctcaactcaa aaaattcgtt cacatcaaaa attgaaaatt 5461 tggataggct ttgctaaaaa aattcaaaaa aataaaattt aaaattttta ggaatcttgt 5521 ttattttagg atttgttttc gaattttgaa ccggggaaag cttcaacatt ttctaaactc 5581 gaaaaaatta agaagttata gcgttttcat tcttaaaact gaccttgaaa gttttaggcc 5641 taaaataatt cgatttttac aatttttttc atagaaaact tggaaatttt gcttcaacca 5701 gcaccaatac agaaagagtt ttacttctcg catgcaatta tgctttcaaa atttcggagt 5761 tcacaaatct aaggaagtaa cagcaatttc gacctcacat tgatatgttt tttgcatttt 5821 ttgatatcat ttatacgatt ttgagcttgt tttttgagaa atcaacaccg gaattgcgct 5881 aatgctcctt tttcgtcatc aaccacaatg ctgcttattc atctcaaaaa aatatttcgc 5941 atcaaaaatt ttaaattttt ggaaaggcta accccttgct aaaaaaatta aaaaaaaatt 6001 aaaatcttac attttaaggg gttttgttat tttacgactc atcctccaat cttaaactgc 6061 ggaatgcttt aaaattttct aaattcgaaa aaaattaatg tgttacagcg tttacgaact 6121 taaaaattac atatgtacat accttgtatt ctcactttgt aaaaaaatca gcttgaaata 6181 aacacaaata ctgatgaatt gattcttcag cgaaataatt ttcaccatta attgtcattt 6241 ccatatggca cacgaccccc tctctctcac aaaaacaaac cattacttac ctccagcaat 6301 gcaatacaat aatgaaagtc taaacacttc acttagctca ctgtaatata tcaaaaactt 6361 tgcacccacc atgcatgaga gctttaaacc tactttcatt ctaactcatc caaatggggc 6421 atgcttaatc tgctgatttt ctgtttaatg aaattgtaac tctttaaagt attctcgagt 6481 ttacatatgg cctctactag ggtttactta tctctcctac tcttacgctc tcttcatctt 6541 tggctttatc tcagtgctgt gttgtcagtc tgagacataa cggatttctc tcttggcaat 6601 gtgcccacat catatgattt gttgttgcga ctacaatgat ttggttatag gttcactaac 6661 acaaactcag gtcgtgtttt catgcacagc gtctgtgaca aagtttgttt ataaattatt 6721 actttgttaa taattttgaa ggaattttgt tataattttt ctcataaata tagtgcacat 6781 ctccataaat atatctttcg attattataa cctttgttgc agttgaatgt ccaggaggcc 6841 agcaaagtat acagcaaagt ttcgcttagc agtttaacat atgacatcat tttcagttat 6901 ctattgtgaa tggtatataa aattgttagt tattttttat tggaatttcc taattcaatt 6961 ttaatttcaa attctttaaa aactttgaaa tttctaaatt ttgggctttg tttagaatgt 7021 gtaggcatgt cctttgaata ttttgttgtt cttaagagtt ttatgtgttt tgtctaaacc 7081 ttaatcttta aaaaggttct tttagctagt ttttgatata aaaattaata aaagtgtgcc 7141 aaacttattt tgaaaactta gaaatttgtg gataataata aaaacgtttg ctaccaatag 7201 ggaaaattat caaaagcaat tttatgcatt aaaaaaaatc ccaaaaaaaa gtattccttt 7261 attcttttaa aataaattat ttaaaaaaac acaaaacata aatgtcttaa aatttagagc 7321 ataccaaaga acgaaagtaa aaacctttag gcaaagttta accaaataaa atataagaaa 7381 aacaaaatag ataatttttg acaagtatag ctgggacttg gtgcaatatt agaaagagaa 7441 atatgaaaaa ataaaaaaaa aaaataaata aaaaaacttg ctgttttgat aaaacccatg 7501 gaaaaagagg ctaaaatttg agacatacca catattagat aaaatataaa tatacaaaaa 7561 agaaaaaatt acgagcattt tcgaaatttt tactaaaacc cgtagaaaaa cggaaatata 7621 actcttctat agaccagaaa tcttacacag tttatatata gaatttcaaa acacaaaagc 7681 cataggaagg cagacagctt ttacaaaaca taaacaatta taaagacgtc ctaggccttt 7741 tccacacacg ctcctaagcc cctcatcagc ataaacgttt taacaagaca ttggaaaata 7801 tggaaaaaca taagaaatac tatatgtata tacatatata aacaaaaaac aacatattat 7861 atacaattat atatagatat acatatttag aacaaaatat atataaagtc catatataag 7921 ctaattcttt tatatgaaaa gtcactttaa ttatgtatat tttttgtggt acattcaagt 7981 tttgagcttt tttgcagcag caatatatgt ttacatatat atttttttta aatttctaaa 8041 catttttcct tgagaaaaag ttttacacaa agagagttaa aaaaaaattt caaatatttg 8101 cctgcatgtt tttcacacaa atacacacat attctttgtt tttgtttttt ttttttaatt 8161 gaaacgtaaa tacaaccctg tgatatatat ttcattttat tgttttattg taattattga 8221 tctttaagtt tctaagctaa aattgcgaag tactgcaagg ctaagcaact accaacagca 8281 attgcaataa caaatgaaat aaaacaacaa caaaaaatga tttttttgta taaacctata 8341 attatagtat aatttataca tattaaataa tgcatatata tagtggatgt ttataaaagc 8401 aaaactctta aatatagtaa gcagcttagt gcatattacg ttattttcct tcgtgaaaac 8461 caataaaaaa caatttatgg aaaa