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LOCUS XM_059368329 8948 bp mRNA linear INV 02-SEP-2023 (LOC106085140), transcript variant X2, mRNA. ACCESSION XM_059368329 VERSION XM_059368329.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8948 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..8948 /gene="LOC106085140" /note="uncharacterized LOC106085140; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:106085140" CDS 341..3343 /gene="LOC106085140" /codon_start=1 /product="uncharacterized protein LOC106085140 isoform X1" /protein_id="XP_059224312.1" /db_xref="GeneID:106085140" /translation="MARKKKSPKEAAAVKDDSGACGIDNNLLGLPHSLHRCSKDDNLM LHASDSELSEIKQLEKNKSNLFLIKSYSFIDKTNARRPNSLNIPQKLQEFENYHTLLL EESSPVTPLKEDHHKAKEKFKETKKNSKKSSKLGKMKKSKSTYDSLEDLSEFQDILRK PTVILDCEPSGDSSKRPLTFVVDNPHKPVVKSKTMEDIAPLIKRESFIRHSLQSIRRS FSSSKKSQISSSSSNNSSSACSSASSTSSSSSSGGDPQGNSLKKSKNHKNKDKTKIAS EQNNSKEDAIKATPKRNGEYKTHANEPELHNCNQQLMIENTLKASMPQQPIVVISSPS PASSMACLAAHVTLNAPNAMPANSNNNNNSNNNAVILAVLQEEDEKDLQNPLERSTSS VSTLAQLPTDSLGSSSMAPLQTHTEAQSVQCLNSTQSYDHQDSHSPTQATKRSHLQHQ QSIAESLESTSIGCATSSEYSSARSLKHSTTSLAPLQSVPSSTSLRSISPSRRSASSN SSSTAKHEQSPAANTAAGAAVAAATTSAAIASGSSSGQNITPPEKEKKRKEVSSSRVK KFQRHFSQVSQDEKLINYFSCALVSDILLQGHLYITDQHFAFYSNVFGYVTKVVIPTS SVTKISKEKTAKIIPNAVGVATADERHVFGSFISREAAFRLMCSVCPPLDALETLVKD PASIEISEEYSVEDDSSCSISGNESPAQATDNANSTHDNSQTILRRSVANSSLSIADS SAAHKQRHSDIPLNAKTANNNAAFSRASAPPVPGLASAAATAHYANGGSGAVSGHATV AGGGGIGHVIVSSINGPATAIGCPSLEGATNLTFIAGNASTTTSATSTPTPSTSSSPT TVMALPHTKAYQILNKFRTLSNKLLVNLKFPTEIHVVYLGAMLTVLLAVFTIFLLYRI LDIEAKTNVYRSPIEFKWQSANDDDIFAEALRFQKQLQVKSTEEAQNILKTNLEQIAK VRRSLETLSMLIHDRSSSFDSTNPDDSD" polyA_site 8948 /gene="LOC106085140" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 caaaaaataa taaataacaa caaagaaaaa ccaaaaatta taagaaattt taacaaaaaa 61 caacaattta acaaaagtat ataaaaaaca acaacaacaa aaaccttaac accaaatcaa 121 aaaccaaaac cagcaccaat tttcaagttt aaacaacaaa aaaacaagtg tatagtcaac 181 aaaaaagtgt aaccaaactc accaaaaagt gttaaaaaat tttctcaaac ccctccgctt 241 gtactgctgt agaactactc aagaaatgac tcaactctaa caccttcaga aaaccattat 301 tgaagacaac aacaactcca caatattttc ttcacaaaaa atggctcgca aaaagaaatc 361 ccctaaggag gcagcagccg ttaaggacga ttccggagcc tgtggcatag ataataattt 421 actgggcctt cctcattctc ttcatcgctg cagcaaggat gacaatctta tgctacatgc 481 cagcgatagt gaattgtctg agatcaaaca attggagaag aataaatcaa atttatttct 541 tatcaagtct tactccttta ttgataagac caatgcgaga agacccaatt ccttgaatat 601 acctcagaaa ctgcaggaat ttgaaaacta tcataccctg ctattggagg aaagctctcc 661 agtgacccct ctaaaagaag accatcacaa ggcgaaagaa aagtttaagg agacgaagaa 721 aaattccaaa aaatcttcca agctaggcaa aatgaaaaaa tccaaatcca cctatgactc 781 cttggaggat ttaagtgagt tccaggatat tttaagaaag cccacagtta tcttggattg 841 tgagcccagt ggtgactcta gcaagaggcc tttgactttt gttgtggata atccccataa 901 accagtggtt aaatccaaga ccatggagga tatagctccc ttaatcaaac gagagtcttt 961 tatacgccat agcttgcaat ccataaggcg cagcttttcc tcttcgaaaa aatctcaaat 1021 atcttcgtct tcatccaata actcctcgtc ggcctgctct tcggcatctt ccacttcgtc 1081 cagctcatct tcaggtggcg acccacaagg caatagccta aagaaatcca aaaaccataa 1141 gaacaaagac aaaaccaaaa tagcctcaga acaaaacaac tccaaagaag atgcaatcaa 1201 agcaacacct aagagaaatg gggaatataa aacacatgcc aatgagccag agttacacaa 1261 ctgcaatcaa cagctgatga tagaaaatac gctgaaagcc tctatgccac agcaacccat 1321 agtggtgata tcctcgcctt cgccagcatc atctatggcc tgcttggctg cccatgtgac 1381 tttaaacgcc cccaatgcta tgcctgcaaa ctctaacaac aacaacaaca gtaacaacaa 1441 tgcggttatt ttagctgtac ttcaagagga ggatgaaaag gatttacaaa atcccttaga 1501 aagatcaacc agcagcgtta gtacacttgc tcagttgccc acagacagtc ttggctcttc 1561 gtccatggcc cctttgcaaa cacacactga ggctcaaagt gttcagtgtt taaattcgac 1621 acaatcgtac gaccatcagg attctcatag tccaacacaa gcgaccaaac gttctcacct 1681 acagcatcag cagtcgatag cggaatccct agaatccacg tcgataggtt gtgcaacgtc 1741 tagtgaatat tcaagcgcaa gatctctcaa acatagcacc acatcgttgg cccccctgca 1801 atcggtacca tcctcgacca gcctgcgcag cataagtcct tcgcgtcgta gtgcgagtag 1861 caacagcagc agcacggcca agcatgagca atcaccggcg gctaatacag ccgccggtgc 1921 tgctgttgct gctgccacta cctctgccgc aatcgcctct ggttcaagtt cgggccaaaa 1981 tatcacacca ccggaaaaag aaaagaaacg caaagaggtt tcatcgtctc gggtaaaaaa 2041 gttccaaagg catttctctc aggtgtcgca agatgagaag ttaattaact atttttcctg 2101 tgctttagtc agtgatatat tactgcaagg acatctgtat ataacagatc aacattttgc 2161 attttattcc aatgtttttg gttatgttac taaggttgtt atacccacat cgtcggttac 2221 gaaaatttcc aaagaaaaaa ccgcaaaaat cataccaaat gctgtgggtg tggccaccgc 2281 cgacgaacgc catgtctttg gcagtttcat tagtcgcgag gctgcctttc gtctgatgtg 2341 cagtgtctgc cctcccctgg atgcccttga aacgttggtc aaagatccgg cgagcattga 2401 aatctccgaa gaatactcag ttgaggatga tagcagctgt tccataagcg gcaacgaaag 2461 tcccgctcag gccacagaca atgccaattc aacgcatgat aatagtcaga cgatattaag 2521 acgttccgta gctaattcaa gtttaagtat tgccgatagc tcagcagccc ataaacagag 2581 gcactccgac attccgttaa atgccaaaac agcaaacaat aatgcagctt tctcaagagc 2641 ttcagctcca ccggtgccag ggttagcatc tgcagcagca acagcccatt atgccaatgg 2701 cggtagtggg gccgttagtg gtcatgcaac agtcgccggc ggcggtggca ttggccatgt 2761 cattgtgtcc tccataaatg ggccggcaac agccataggc tgtcccagcc ttgagggcgc 2821 caccaatctc acattcattg cgggcaatgc ttccaccacc acctcggcca cttcaacacc 2881 aacaccgtcg acctcatcgt cgcccaccac cgttatggca ttgccacata caaaagctta 2941 tcaaatctta aataaattta gaacactaag caacaaactg ttggtcaatc tgaaatttcc 3001 cactgaaatc catgtggtat acttgggcgc catgctcacc gtattgctgg ctgtattcac 3061 catattccta ttgtatcgga tattagatat agaagcgaag acgaatgttt atcgatctcc 3121 tatagaattt aaatggcaat ccgccaatga tgatgatatc tttgccgaag cattacgttt 3181 ccaaaaacaa ttgcaagtga aaagcactga agaagctcag aatatactta aaacgaattt 3241 agaacaaatc gctaaggttc gccgcagttt agaaacctta tcgatgttaa tccatgaccg 3301 tagctcatcg tttgattcca caaatcccga tgatagtgac tgaatttata ttttaaaaca 3361 agaaaaactt ggcgaagttt ttcctagtta attattataa gcttagcaat gaaggcgtta 3421 gaagtatgta tgtaccatat gcttaggatc ttgtaattag atatttatta ctattattat 3481 tatcaccttt ttatattatt gaaatattcc ataacttagt ttttgggtga attttttcat 3541 aaacttccat aagtgtgtta aaacttctaa ctaactccct catcccattc ttgtaaatct 3601 aaaaatcaaa tgaattgatt ttgctgaaaa gggaaacaag gggattgcaa aaaaggtttt 3661 gctttagttc ttgttctaaa aatttatgaa tttttttttt aagaatattt ttggaaattt 3721 tttatttaaa aatttccaca aagttttcgg aaaaaaacca aaccatataa aacaatttgt 3781 tttgtgttat ttattataac tttgaaaact gtaatactat cataactttg aaaactgtaa 3841 taatcgaatg ttaaggttaa aagtttaact ttatacctct ttaaaaaaaa aaagtaaaaa 3901 ttctaagcca aaggaaacta atttaaattt ggaaatttat tgaaatattt tttgtaaaac 3961 aaatattatg aaaaaataaa atgaataagc tttaatgact ctgaaaagag ctaatttctc 4021 tctaaacaaa tgagatttct tatatccaag ttgattgaaa tttaaaaaat ttaatttcac 4081 ttgttctatt aatttttgaa acttttaagg gaaataactt aacataaaaa atatgatttc 4141 aacgaattta gttactacaa gtattctata ttaccaccaa agagttaaaa tgtttagggt 4201 gaaatgtgtt aaaggaaata atagaatgat ctcataaaag aaattccact atcaaaaaat 4261 ttctaataat tattaaccca tctaaagtgt agaaaattaa atgagaacaa agttttagtt 4321 taaattattt tttttttgcc gataatgatt cttaaaacct ttgtgaaaca ctatgcaaac 4381 ataacaaaat atgctaaata cttacaatgt atacagtaat caatgctgaa aatgtttata 4441 atttttaata gcaattatgg ggtaaatctg ctttagcata ggcaaatgaa ttgatgtggc 4501 gtttaatttt tggaaaccaa tatctagctg acaacagcct ttctataaat gttacacatg 4561 tttatgtgtg cagcagtttt tttgaacact ttttgttaac gtgggcaaat gaattgattt 4621 ggaaaaactg ttttagacaa aattttttgc tacagatcct ctttctaaat tattccatat 4681 taattatatg tgcaagcatg ttgtaagcta tttctctcta atttcaacat ataaattgat 4741 ctatgaacac agcgctaaga atgaattaag tgaattaagt cacctaatac aagcaaaaga 4801 attgatctaa aaaagccaac aaataggaaa tataccacaa aatacagcca ctcaagatat 4861 actacactac ttcatgaatg caggaatttt cagaaagaac caactattaa gtgagtaaat 4921 gaattgatgt tgaaaagttt ataaagacag gatattgtat tgtagatgcc ccttccagaa 4981 ttattaaagt agtctatgtg tgcaaacgtt ttctcaatat agcttagctt aacattagcc 5041 aatgagttga tgtaggaata caaagcttac gagaattttc aaaaagaatc aactataaaa 5101 ttagtaaatg aattgatgtg gaaaaattta taaaaacaga atattatgtt gcagatgctc 5161 cttcctaatt tattaaagta gtccatgtgt gcaaacattt ttccaataca gcttaaaata 5221 acaataccta atgaattgaa gtagtaataa aaagcttacg agaacatctt gtaaaacact 5281 atctttctaa aatgattaat ttgtgcttta attttctgaa acgactttct ataacaagaa 5341 ttaacgaatt gatgtagcat atcttactaa ataccttctt tctagatttt ttaaatttct 5401 tgattttgtg tgcaaccgat tttttgtaaa aacggttgaa tataatacag gtaaacgaat 5461 tgaacttgaa aaactgaatt gagcaaatga tattgtttta gataatcttt cttaaagttt 5521 tgagatggtt tacgtgtgca aagatttttg aaatgaactt gctgtaatac aagtaaatta 5581 attaatctac aaaaattaaa ttgaacaaaa gatattgttt taaatacttt ttcaatatat 5641 gttaagctcc atgatatgtg attacatttt tgaataaagc ctccctaaca ctggcaaatg 5701 aatttatcta agtaaacaaa gcttaagaga aaatctgact ttctataaat aattagcaat 5761 ttcgacctca cttttttttg catattttgg atatcaatta tgcgattatg agcttgtttt 5821 ttgaagaatc aagactgcag ttgcgcttaa cctcattttt caccataaac tttaacgctg 5881 catactcaac tcaaaaaatt cgttcacatc aaaaattgaa aatttggata ggctttgcta 5941 aaaaaattca aaaaaataaa atttaaaatt tttaggaatc ttgtttattt taggatttgt 6001 tttcgaattt tgaaccgggg aaagcttcaa cattttctaa actcgaaaaa attaagaagt 6061 tatagcgttt tcattcttaa aactgacctt gaaagtttta ggcctaaaat aattcgattt 6121 ttacaatttt tttcatagaa aacttggaaa ttttgcttca accagcacca atacagaaag 6181 agttttactt ctcgcatgca attatgcttt caaaatttcg gagttcacaa atctaaggaa 6241 gtaacagcaa tttcgacctc acattgatat gttttttgca ttttttgata tcatttatac 6301 gattttgagc ttgttttttg agaaatcaac accggaattg cgctaatgct cctttttcgt 6361 catcaaccac aatgctgctt attcatctca aaaaaatatt tcgcatcaaa aattttaaat 6421 ttttggaaag gctaacccct tgctaaaaaa attaaaaaaa aattaaaatc ttacatttta 6481 aggggttttg ttattttacg actcatcctc caatcttaaa ctgcggaatg ctttaaaatt 6541 ttctaaattc gaaaaaaatt aatgtgttac agcgtttacg aacttaaaaa ttacatatgt 6601 acataccttg tattctcact ttgtaaaaaa atcagcttga aataaacaca aatactgatg 6661 aattgattct tcagcgaaat aattttcacc attaattgtc atttccatat ggcacacgac 6721 cccctctctc tcacaaaaac aaaccattac ttacctccag caatgcaata caataatgaa 6781 agtctaaaca cttcacttag ctcactgtaa tatatcaaaa actttgcacc caccatgcat 6841 gagagcttta aacctacttt cattctaact catccaaatg gggcatgctt aatctgctga 6901 ttttctgttt aatgaaattg taactcttta aagtattctc gagtttacat atggcctcta 6961 ctagggttta cttatctctc ctactcttac gctctcttca tctttggctt tatctcagtg 7021 ctgtgttgtc agtctgagac ataacggatt tctctcttgg caatgtgccc acatcatatg 7081 atttgttgtt gcgactacaa tgatttggtt ataggttcac taacacaaac tcaggtcgtg 7141 ttttcatgca cagcgtctgt gacaaagttt gtttataaat tattactttg ttaataattt 7201 tgaaggaatt ttgttataat ttttctcata aatatagtgc acatctccat aaatatatct 7261 ttcgattatt ataacctttg ttgcagttga atgtccagga ggccagcaaa gtatacagca 7321 aagtttcgct tagcagttta acatatgaca tcattttcag ttatctattg tgaatggtat 7381 ataaaattgt tagttatttt ttattggaat ttcctaattc aattttaatt tcaaattctt 7441 taaaaacttt gaaatttcta aattttgggc tttgtttaga atgtgtaggc atgtcctttg 7501 aatattttgt tgttcttaag agttttatgt gttttgtcta aaccttaatc tttaaaaagg 7561 ttcttttagc tagtttttga tataaaaatt aataaaagtg tgccaaactt attttgaaaa 7621 cttagaaatt tgtggataat aataaaaacg tttgctacca atagggaaaa ttatcaaaag 7681 caattttatg cattaaaaaa aatcccaaaa aaaagtattc ctttattctt ttaaaataaa 7741 ttatttaaaa aaacacaaaa cataaatgtc ttaaaattta gagcatacca aagaacgaaa 7801 gtaaaaacct ttaggcaaag tttaaccaaa taaaatataa gaaaaacaaa atagataatt 7861 tttgacaagt atagctggga cttggtgcaa tattagaaag agaaatatga aaaaataaaa 7921 aaaaaaaata aataaaaaaa cttgctgttt tgataaaacc catggaaaaa gaggctaaaa 7981 tttgagacat accacatatt agataaaata taaatataca aaaaagaaaa aattacgagc 8041 attttcgaaa tttttactaa aacccgtaga aaaacggaaa tataactctt ctatagacca 8101 gaaatcttac acagtttata tatagaattt caaaacacaa aagccatagg aaggcagaca 8161 gcttttacaa aacataaaca attataaaga cgtcctaggc cttttccaca cacgctccta 8221 agcccctcat cagcataaac gttttaacaa gacattggaa aatatggaaa aacataagaa 8281 atactatatg tatatacata tataaacaaa aaacaacata ttatatacaa ttatatatag 8341 atatacatat ttagaacaaa atatatataa agtccatata taagctaatt cttttatatg 8401 aaaagtcact ttaattatgt atattttttg tggtacattc aagttttgag cttttttgca 8461 gcagcaatat atgtttacat atatattttt tttaaatttc taaacatttt tccttgagaa 8521 aaagttttac acaaagagag ttaaaaaaaa atttcaaata tttgcctgca tgtttttcac 8581 acaaatacac acatattctt tgtttttgtt tttttttttt aattgaaacg taaatacaac 8641 cctgtgatat atatttcatt ttattgtttt attgtaatta ttgatcttta agtttctaag 8701 ctaaaattgc gaagtactgc aaggctaagc aactaccaac agcaattgca ataacaaatg 8761 aaataaaaca acaacaaaaa atgatttttt tgtataaacc tataattata gtataattta 8821 tacatattaa ataatgcata tatatagtgg atgtttataa aagcaaaact cttaaatata 8881 gtaagcagct tagtgcatat tacgttattt tccttcgtga aaaccaataa aaaacaattt 8941 atggaaaa