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LOCUS XM_059368309 3465 bp mRNA linear INV 02-SEP-2023 (LOC106093085), transcript variant X4, mRNA. ACCESSION XM_059368309 VERSION XM_059368309.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3465 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3465 /gene="LOC106093085" /note="optomotor-blind protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:106093085" CDS 121..2679 /gene="LOC106093085" /codon_start=1 /product="optomotor-blind protein isoform X4" /protein_id="XP_059224292.1" /db_xref="GeneID:106093085" /translation="MRYDVQELLHQSAEDPFARFANGMAYHPFLQLSRPTDFSVSSLL TAGHQATTQAVDSSGNNSTLPAAVSPPHRHLSQGPISNHQQQTTHQQLAGIGGGQSSP VGGQQPPQLSPGPESSNNNNESSSCTSRNPGLLSSNDSTNSSEATNRPRSNNNLPSAL LTASHSAAAAAAAAAAASHALPPHSSPQAQAPPPSHPHHSPVPGHLGAHLPQQPPYFP AAALAALAGSPAGPHPGLYPGPLRFPPHHPHHHHHPLGTAYTTAEDVVLASAVAHQLH PAMRPLRALQPEEDGVVDDPKVTLEGKELWEKFHKLGTEMVITKSGRQMFPQMKFRVS GLDAKAKYILLLDIVAADDYRYKFHNSRWMIAGKADPEMPKRMYIHPDSPTTGEQWMQ KVVSFHKLKLTNNISDKHGFVSTTILNSMHKYQPRFHLVRANDIIKLPYSTFRTYVFK ETEFIAVTAYQNEKITQLKIDNNPFAKGFRDTGAGKREKNCYRQALLSNRGSDSDKLN PTHVSSSRAPLHLGHTGRPPHHLHSHPSMHDNQQDDEDKLLDVVGPPQSPLLPLSHSL QQMHAHQHSAWFNHLAGASDHGSDDALRRRLQSDEVERDGSDSSCSESVGGSTGGAFR PTSSGSPKEGAAGLNASGSYPSPNISVGPPIHPSPHLLPYLYPHGLYPPHHLGLLHNP AAAGLNPGLLFNAQLALAAQHPALFGHYSGHTPASPLHGLKGHRFSPYTLPGSLGSAF DAVTPGSNANRSGSECPGMSSGTGSVDNGPRSLSSSPRPRASSHSPPTRPISMSPTTP PSLLKRTTNSPSELKSIENMVNGLEVQHNGSACSTSGGSMDDLHRKSPGLHADQ" ORIGIN 1 aacaaaataa aagccccgtc taaaaatcac cattctaaca tctggacagc atcgtcgtag 61 tagcaggcgt gtgtcattgt gttttttcat tcatagttct tgccccacga atgtaatgta 121 atgagatacg acgtccagga gttacttcat cagtcagctg aagatccatt cgccaggttc 181 gcaaatggta tggcatatca cccatttctg caactgtctc gacccactga cttcagcgtt 241 tcctcgctgt tgacggcggg acaccaagcg acaacgcagg cagtcgattc cagcggcaac 301 aactccacgt tgcccgccgc cgtctcgcca ccacaccgcc atctgtcaca gggtcccatc 361 tcgaatcatc aacagcagac gacacatcag cagcttgccg gcattggagg tggtcaatcg 421 tcgcctgtag gtggccagca gccgccccag ctatcgcccg gtccagaatc ctcgaacaac 481 aacaacgaat cctccagctg tacgagccgc aatcctggcc tgctctcctc caacgatagc 541 acaaacagta gcgaggccac caatcgacca cgcagcaata acaatttgcc gtcggctctg 601 ctaacggcct cacattcggc agctgctgca gcggctgcgg ctgccgccgc ctcacacgct 661 ctaccaccgc actcatctcc tcaagctcaa gcgccacctc cgtcacatcc tcatcactct 721 ccagtacctg gtcacttagg agctcatctg cctcaacagc ctccgtattt cccagcagct 781 gcactggctg ccctagctgg tagtccggcc ggtccccatc cgggtctgta tccaggacct 841 ttacgatttc caccgcatca tcctcaccac catcatcatc ctttggggac agcgtatacg 901 acagccgaag acgtggttct agcctcagcg gtagcccatc aattgcatcc ggccatgcgt 961 ccgctgcgtg ctctacagcc cgaggaggat ggtgtcgtcg atgatcccaa agtaacactg 1021 gagggcaaag agctgtggga gaaattccat aaacttggca cagaaatggt cataacgaaa 1081 agtgggagac aaatgtttcc ccaaatgaaa tttcgagtct ccggactaga tgccaaggcg 1141 aaatatatac tcctgcttga tatagtggcg gccgacgact atcgctataa attccacaat 1201 agccgttgga tgattgccgg caaagctgat cccgaaatgc ccaaacgcat gtacatccat 1261 ccagattcgc ccaccaccgg cgaacagtgg atgcaaaaag ttgtctcatt tcacaaacta 1321 aagctgacca acaacattag tgataaacat ggatttgtaa gtactacgat actcaactcc 1381 atgcacaagt accaaccccg gtttcatttg gtgcgagcca acgacatcat aaaactacca 1441 tactccacgt tcaggacgta tgttttcaag gagacggaat tcatagctgt gactgcatat 1501 caaaatgaaa agataaccca gttgaaaatc gacaacaatc ctttcgccaa aggttttcgc 1561 gataccggcg ctggaaaaag ggaaaagaat tgttacaggc aagcgttact ctcgaatcgc 1621 gggtccgatt cggataagct aaaccccaca catgtcagca gttcgagagc tcctttgcat 1681 ttgggccata cgggcaggcc gccccatcat ttacactcgc acccctccat gcatgacaat 1741 caacaggatg atgaggataa attattggat gtggtggggc cgccacagag ccctttgctg 1801 cctttaagtc attcgttgca gcaaatgcat gcccatcaac attcggcttg gttcaaccac 1861 ttggccgggg ccagcgatca tggcagcgat gatgctttgc ggcggcgcct acaatcggac 1921 gaagtggaac gagatggcag tgattccagt tgctcggaaa gtgtgggtgg cagtacgggt 1981 ggtgcgttta ggcccacttc atcgggcagt cccaaggagg gagccgctgg cctaaatgct 2041 tcgggttcgt atccctcgcc caatatttca gtgggtccac ccatacatcc atcgccacac 2101 ctgttgcctt acctatatcc acatggcctg tacccgccac accatttggg tttgttgcac 2161 aatcccgccg cggcaggcct caatccaggt ctgctattca atgctcaact tgctttagcc 2221 gctcagcatc ccgccttatt tggacattac tcaggacaca caccagcctc accgttgcat 2281 ggtcttaagg gtcatcgatt ttcgccctac accctgccgg gcagtttagg ctcggccttt 2341 gatgcagtca caccgggctc caatgcgaat cgttccggct ccgagtgccc cggcatgagt 2401 agtggcacgg gcagtgtcga caatgggcct cgcagcctta gctctagtcc aagacctcgt 2461 gcctcatcgc attcgccacc gacgcggcca atatccatgt cacccaccac gccgccctcg 2521 ctgctgaagc gaaccaccaa ctcaccgtca gagctcaaaa gtatcgagaa catggtcaat 2581 gggctagaag tgcaacacaa tggcagtgcc tgcagcacca gtggtggctc catggatgat 2641 ctgcatagga aatcgccagg cctgcatgcg gatcagtgac aattgtatga ccgggacgac 2701 aacgatcgct catctgtcat agatctcgat gacgtgtgac aagttagcta ttcgttgcat 2761 ttgcagcccg ttataaatgc ctggcgccag atcaatggaa ctgataaagc actacaacac 2821 caatcaccca ttcattctcc agcaccagca acattctgtt gatcacccaa aacaaaaaaa 2881 gcggatataa cttcaatgct atcgagcaac cgagtgaatg aatgaaggcg atggacgacg 2941 aacacgtatg taagatggca cccatgaatg tatcgatgta agtccctagc ccaaaatact 3001 tccagtgttg tccttgtagt gtgaaatcga caaaaaatta ccccaaaaca cccctctttt 3061 atattttcta actctatata tctcctttat tcccaatcga tctccctctc tctttatttg 3121 tccctttcgt tttacaaact tctttcgatt aatttaaacc aaagaccgta tcttactttt 3181 atgttctcct ctcctcccct tattgttcat gttttttttt tcttattttt aaaaaaacaa 3241 attatcatta taagtaatgt gtatgtatat gtatgtagag cttaccactt acaaccaatc 3301 caagaccatt ccaagcagac cctataacta ccacccaaat cccgattccc aagctaggac 3361 aaatgctcct agaaagaaac tacaacaaca gcaacctagc ttcgtacttt gtacaatatg 3421 taaatttatg cttaagttct gtcctcaagc agcactctct agtat