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LOCUS XM_059368284 7470 bp mRNA linear INV 02-SEP-2023 (LOC106087029), transcript variant X4, mRNA. ACCESSION XM_059368284 VERSION XM_059368284.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7470 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7470 /gene="LOC106087029" /note="uncharacterized LOC106087029; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins" /db_xref="GeneID:106087029" CDS 813..5723 /gene="LOC106087029" /codon_start=1 /product="uncharacterized protein LOC106087029 isoform X4" /protein_id="XP_059224267.1" /db_xref="GeneID:106087029" /translation="MQSNTSRATLSAQSSGTPSASTISSSGKQQVVELSGYVIILVEN VDGKIKLYGSPPDRDNLEVGDEILEVNGLTLDNISRTEVIRHIHDCIKSCTICLRVRK KNDSRLAWDIGNSVQDAFVIAVEEHARERLQRLAALNRVTPVDITQLSKKLQQTKSGA PSTQKQDLSFLNEASPIYVTSFNSNHTACNSTTLTTAAAVATSTTGTAGLISATTITP TAVASTTTNASSAKPQTVPASGVGPLSAAIVAGAKTTATGNTSTVAPTGADRNANNCP QASVIAAAAVASSLAAASKQIPASVHHPLPTAAAAAAITAGAPASAATTTTSTTSILT NHNSIYQATALAKLPSSLPHKKLTIARSLQHLEVKEVDDDDDDLAALGANLCNINFIN YKNKHAEIPTPTTTGPLHVSPFVGNAPVIVAGPSSTLGRRKSQQSNSNTNTNPVTVSA TVDVHHSAHAAGASTAYHDHIPPPLQLPPPNKIYVDAQTLTSPRLAKNAQGGGVVVVG AAGDSLITKGGPTLNNNINNNNSLKTLSALSAAATASIKAPAVTATAANKATALQLNN NNSQQLPSYAVHHLGTLQQLTQKQQPATNATAILNAQLTSSSCSNQLSSNNSSIHSAS SASTQASSIITAPLSAGASSSAANTASTTATTKNLSSNLSNNCDLHISANNLQQQQQQ QHLQQQQHQHQQQPPRRELLTDDDEDETDDILQLNTNSLSNNLTQLNYSPNSSISRGG FELLLGDQSLRQDIRPRRRSGSSIVVLDSEDLKPCLPDVYNNLPHIRQPNEDTQEIDQ EMYTTMLKSINQDNGPHREMAVDCPDNFIARNKTPPRYPPPRPPQLNGSIKPVPPPRD TVRVEKDGRVQRSPLPPQLPDRRGMPGANSQQQQIAQIVEPTMEQLDSIKKYQEQLRR RREEEERIAQQNEFLRASLRGSRKLKALQDNKTGAQQQQPVAAERSVIGVENEAYVED EDVDKVKGYGDLIAALNRLQSQLTKNGMNTLAGRVSAAHNILSNPGVAHALAARAAVL QRRRSKATTPVSTNAMELQKDIVELLTKSNSAAAIELGNLLTSHEMEGLLLAHDRVAT HTDGTPSPSLSGAGSPQPISPSSAPLPPLPVPPKSASVRGTAVPPPVVPPPLAQRSAM PLPPNVPAHNATSTGYAHMKPAGSHRPDSPPLSACFGILNDQNDNIRIIQIEKSTEPL GATVRNEGEAVVIGRIVRGGAAEKSGLLHEGDEILEVNGQELRGKTVNDVCALLSTMQ GTLTFLIVPAGSPPPGGGHHRENAVLHVRAHFDYDPEDDLYIPCRELGISFQKGDVLH VISREDPNWWQAYREGEEDQTLAGLIPSQSFQHQRETMKLAIAEEAGLQGRNRGKDGG AKGSTLLCARKGRKKKKKASSEAGYPLYATTAPDETEPEEILTYEEVALYYPRATHKR PIVLIGPPNIGRHELRQRLMADSDRFSAAVPHTSRTRREGEVPGVDYHFITRQAFEAD ILARRFVEHGEYEKAYYGTSLEAIRTVVASGKICVLNLHPQSLKLLRASDLKPYVVLV APPSLDKLRQKKLRNGEPFKEEELKDIIATARDMEARWGHLFDMIIINNDTERAYHQL LAEINSLEREPQWVPASWVHNNRDES" polyA_site 7470 /gene="LOC106087029" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tactcgtcgc cgtcgttgtc gtttgtggag ccctaaaaat agttacatct tttttttttg 61 tttgaaaaaa atttcataaa accaaagtaa ttttactcaa aaaggaaagt gttatagaat 121 agctaagaaa ttgttgccat aaaaagagtt ttaataattt ttttacccaa ttatattttt 181 tcacggtttc caatacatgg tgtgatatat ttatgaaaag cattttgttg gccgaaaaca 241 aacgctactg agtttgaaca gagctggcaa cgaaaaagga aaaaatttaa taaaaattca 301 ataacattat cacctttgat tatagcaagc caggagcacc ataaaacctt tggcaaaggt 361 caaatgtgga aaaaatccaa ataacaaaat gtatcgctga ttcggaaatt ggtattaaca 421 aactattggt tgccccgcct ctagtccttc ctctacaaca atcgcataac tgggattttc 481 gtttacgccg ttgtgatttt tgccccgcag actaccgttt tgggtctgca tgcgtgcgtg 541 cgtgggcttt cgtgagtttg aatgcgggca acgtgcccgc aacgtgtgtg tgcgtcgttg 601 tcgttgtcgt cgtcgtcgtt gttgttgtcc tagttcttcg tggcatagtg tatgctcttt 661 gtaattcatc ccaaacatca acttttctac tattggaaaa cttttcgcag aattctttgt 721 tgtgccatta gaagtttccc ctcaaagttt gttttcttgc ttactttcaa agggcgtctt 781 atttttcgct ttggctttgg gcggctgctg caatgcaatc gaataccagt cgtgctactt 841 tgagtgcaca atcctcggga acaccatcgg cgtcaacgat atcatcatca ggcaagcaac 901 aagtggttga attatctggt tatgtcatta ttctggtgga gaatgttgat ggtaaaatta 961 aattatatgg ctctccaccc gatcgtgata atttggaagt gggcgatgag atactcgaag 1021 ttaatggctt aacattggat aatatttcac gaacggaagt tatacgacac atacacgatt 1081 gtattaaatc gtgtaccata tgtttacggg ttcgcaagaa aaatgattcc aggctggctt 1141 gggatattgg caattcagtg caggacgcat ttgttatagc ggttgaggaa catgcaagag 1201 aacgtttgca acgtttagcg gccttaaatc gtgtaacacc tgtggatatt actcagttat 1261 cgaaaaagct ccaacaaacc aaaagcggtg ctccatcgac acaaaaacag gacttaagtt 1321 tcctcaacga agcctccccc atctatgtga cctcattcaa tagcaatcat acggcctgca 1381 atagcaccac cctaacgaca gcggcagcgg tagccacctc tactacgggg acagcggggc 1441 tgataagtgc aacaacaata acgcccacgg ctgttgcatc cacgacgact aatgccagtt 1501 cggctaagcc acagacagta ccagccagcg gtgtaggtcc actatcggca gccatagtag 1561 caggagcaaa aaccacagca accggaaaca cctcaacagt agcaccaaca ggagccgata 1621 gaaatgccaa caattgcccc caggcctctg taatagcagc agcagctgta gcatcctcat 1681 tagcggctgc ctccaagcag ataccagcct cagttcacca cccactacca acagcagcag 1741 cagcagcagc aatcacagca ggagccccag catcagcggc cacaacaaca acgtccacaa 1801 cctcaatatt gacaaatcat aatagcattt atcaggccac agccctagcg aaattgccct 1861 cctcattgcc gcacaaaaag ctaaccatcg cacgcagcct ccaacatttg gaggttaagg 1921 aggtggacga tgacgatgat gatttggccg cattaggtgc caatttgtgt aacatcaatt 1981 tcattaacta caagaacaag catgccgaaa tacccacacc cacaaccact ggccccctgc 2041 atgttagtcc atttgtgggc aacgcacctg tgatagtagc aggtcccagt tccaccttgg 2101 ggcgacgcaa atcgcagcag agcaacagca acaccaatac gaatcctgtt accgttagtg 2161 ccacagttga tgttcatcac tcagctcatg cggcgggagc atcaacagcc tatcacgatc 2221 acataccacc gcctttacag ttacccccgc ccaataagat ctatgtggat gcccaaacac 2281 tgacctcgcc gcgcctggcc aagaacgccc aaggaggagg agtagtagta gtaggagcag 2341 caggcgattc tttgatcacc aaaggtggcc caactttgaa caacaatatc aacaacaaca 2401 atagtctaaa aactttatcg gcattatcgg cggccgccac agccagtatc aaggcaccag 2461 ccgtaactgc tactgctgct aacaaggcga cagctctgca actgaacaat aacaactctc 2521 aacagcttcc ttcgtatgcg gtacatcatt tgggtacgct acagcagctg acgcagaagc 2581 agcagccagc aacgaatgca actgcaatcc ttaatgccca gttaacatct tcctcgtgct 2641 cgaatcagct cagcagcaac aatagcagca ttcacagtgc atccagtgca tcgacgcaag 2701 catcatcaat aataacggca ccattgtcgg cgggagcctc atcatcagca gcaaatacag 2761 catctacgac agcaacaaca aaaaatctta gcagtaatct tagtaataat tgtgatttac 2821 atatatcagc gaataatctt caacaacaac agcaacaaca acatctacaa cagcagcagc 2881 accagcacca gcaacaacca ccgagaagag agttactaac agatgacgat gaagatgaaa 2941 cagatgatat tttacaattg aatacaaata gtttatcaaa taatttaacg caactaaatt 3001 atagtccaaa tagcagcata tcaagaggtg gatttgaact actactgggt gatcaatcgt 3061 taaggcaaga tatcaggccc cggcgtagat ccggctctag tatagtggtt ttagatagtg 3121 aagatttaaa gccctgtcta cccgatgttt ataataatct accacatata cgacagccaa 3181 acgaagatac ccaagagatt gatcaggaaa tgtacacaac catgttgaag tccataaatc 3241 aagataatgg acctcatcgc gagatggctg ttgattgtcc agataatttt atagcacgta 3301 ataaaacacc accacgttat ccgccacccc gtccaccaca gttaaatggc tcgattaagc 3361 cggtgccacc tccacgtgac acagtgcgtg tggaaaaaga tggacgtgta cagcgttcac 3421 cattgccgcc gcaattaccc gatcgtcgag ggatgccggg ggcaaatagt caacaacaac 3481 agattgccca aattgtggag ccaacaatgg aacaattgga tagtattaag aaatatcagg 3541 aacaattgcg tcgccgacga gaagaggagg agaggattgc ccaacagaat gagtttttgc 3601 gtgccagctt acgaggttca cgaaagctta aagctttgca ggataataaa actggcgccc 3661 aacagcagca accggtagca gcagaacgtt ctgttattgg ggtagaaaat gaagcctatg 3721 tggaggatga ggatgtggat aaagttaaag gctatggtga tttaattgcc gccttaaacc 3781 gtctccagag tcagctaacc aaaaatggca tgaacacact cgcaggccga gtgtcggccg 3841 ctcacaatat tctctccaat ccgggcgtag cccatgcctt ggctgcccgt gccgcggtgc 3901 tgcaacgtcg acgctccaaa gccaccactc cagtcagtac aaatgccatg gaattgcaaa 3961 aggatatcgt ggagctccta accaagtcca attctgcagc ggccattgaa ttgggcaact 4021 tgctgacaag tcacgaaatg gagggcctac tattggccca tgatcgtgtg gccacccaca 4081 cagatggtac accatcacca tcgctaagtg gggccggcag tcctcagccc atatcgccta 4141 gttcggcacc ccttccacct ctgcctgtac caccaaaatc tgcctctgta aggggcacag 4201 cagtgccacc acctgtggtg ccgcctccat tggcccaacg cagtgcaatg cctttacctc 4261 ccaatgttcc agcccataat gccaccagca ccggctatgc ccatatgaag ccggccggtt 4321 cgcataggcc ggactcgccg ccactgagtg cctgctttgg tatactcaac gatcaaaatg 4381 acaatatacg tattatacaa attgagaaat cgactgaacc cctaggtgcc acagtacgca 4441 atgaaggtga ggcggtagtc ataggccgca tagtaagggg aggagctgcc gaaaagtccg 4501 gccttctaca cgagggcgat gaaatactcg aggtgaatgg tcaagagttg cgcggcaaga 4561 cggtgaatga tgtttgcgcc ttgctaagca ccatgcaggg caccctcacc tttttgatag 4621 tgcccgctgg cagtcctcca cctggtggcg gccatcatcg tgaaaatgct gtcttacatg 4681 tgcgggctca tttcgattat gatccggaag atgatttgta tataccttgc cgtgagctgg 4741 gcattagttt ccaaaagggt gatgttctac atgtcatctc gagggaggat ccaaattggt 4801 ggcaagcata tcgtgagggt gaagaagacc aaactttggc cggtctaata cctagtcaat 4861 cattccaaca tcaaagggaa accatgaaat tggccatagc cgaagaggcg ggtctgcaag 4921 gcagaaatcg tggcaaagat ggtggggcaa agggatcaac gctgctgtgt gcacgcaagg 4981 gacgcaagaa gaagaagaag gccagttcgg aagcaggata tcctttatat gccaccaccg 5041 cccccgatga aactgaaccc gaggaaatac tcacctatga agaggttgcc ttgtactatc 5101 cccgagccac acacaaacgt cccattgttc taataggccc acccaatata ggacgtcatg 5161 aattgcgtca gcgtcttatg gcggattccg atcggttttc agcagcagtg ccacatacct 5221 cccgcacccg tcgtgaaggc gaagttcctg gtgtcgacta tcattttatc acacgccagg 5281 cttttgaagc tgatattttg gctcgtcgct ttgtggagca tggtgaatat gaaaaagctt 5341 actatggcac ttccttggaa gccatacgta cagttgtggc cagtggtaaa atctgtgttc 5401 ttaatctaca tccacaaagt cttaaacttt taagagcctc ggatttgaaa ccctatgttg 5461 tgctggtggc tccacctagt ctagataaac taagacaaaa gaaattacgc aatggtgaac 5521 catttaagga ggaggagcta aaagatatca ttgctaccgc ccgagacatg gaggcccgct 5581 ggggtcattt attcgatatg atcattatta ataatgatac cgaaagagct tatcatcaat 5641 tgttggccga gattaattca ttggaacgtg agcctcaatg ggtgccagcc agctgggtgc 5701 ataacaatag ggatgagtca taatttttta ataaaaaaaa aaaaacttga aacaaatttt 5761 aagatttagg caaacagcta agaaaaaatt ggaagggaat tttaaaacaa aaattgtaaa 5821 taaaacatga tattaagcaa aaggatttgt gaacagaaaa aaaaattaag aaatcataat 5881 ttatacaaaa tgaagaaaac atttatatat gcaatatttt ttattattat tattataatt 5941 tttattgatt gagaaatttg ttaatgtaga tataacaatt gtgtttgaat gtggtgtttt 6001 tacatccaaa tttactatat aagtaaataa tataattaaa aaaaaaaaaa caaaaacatg 6061 aataaaatta atgtgtatat tattattttt tttaatgaat ttcttttcaa accccgaaaa 6121 tcacaaatag ttttttttta atacataaca cttaacaata actatattac ataaaagaaa 6181 atttgtttga caaatatcga atgtaagtat aataaaaaaa acaaaaaatc ttccttaatt 6241 tccacttttt atgtagaaac ctaaaaatgt ctagaaatta taaaaaaaaa attttgtttt 6301 gtgttttttt aataatttgt aaactaaaca ttccatttat ttcttttttt acatatataa 6361 aatatgtttt taaaatttta tgttttaatt ttctttttaa taaaaaaaaa caaagaaaac 6421 tctaagctaa actttaaaaa aactataaaa aaaaaattaa aaaattatat agttgttatt 6481 gaaaataaag aaaaagacaa catacaaaac aaaatgtata acttctaagc aaatgttaaa 6541 agcagatggt cttaacaata acagcaaacc aactaataaa caattttatg aatccaaaaa 6601 tcaacaacaa caacaacacc ccatttactt tattgcaaaa ccaagaacag caacaactac 6661 aacatcatta aatgtatgtt aagtataaga aaaatcgaag gacatcaatc ctactgctag 6721 taaagttttc atagcctaaa gaaaacgtgt tacattctaa actaatcctc gatatacatc 6781 aaaaagaaat attaacaaaa ctgcaagcaa aaaatatcga aaatttgtat ttaaagaaaa 6841 caaaaaaaaa atacaatgaa taaaaatact tccacttgtt aaatatcttg aaaccctgcc 6901 ccactttata gattttgtta caaaatttga gtacagagtt gtgtttttct gaagaaacga 6961 aaatacaatt ccaatgttaa aattctgtta acattttgta agtgaaatat gaaattcaac 7021 agaaaccttg caaaaaatac ataccctata gaaaaacaca tatatcatcc gacatgtttt 7081 ccatatatac gtacatacat atatattgtc acattaatat atttgtatat tgttttcata 7141 attttgtagt taaatggaaa ttattttttg tgttttattg attgtttttt tttatataac 7201 atatacatga atggataatg gaagcataac ctccaccacc accaacaaca ccccttagga 7261 caaaagcaaa cgaatctgaa agtgaagcga aaaagtatac ataaaaataa aaagccaaca 7321 acaacaacaa caaatgaaaa catattagaa tttagcaaag taactgagaa atggtaacat 7381 acaaaaaaaa actatatcga taaaaagaag aaaaaatcac taacagagaa aaaatcaaga 7441 agattataaa acagagcaag aaaaaagaaa