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LOCUS XM_059368283 7516 bp mRNA linear INV 02-SEP-2023 (LOC106087029), transcript variant X3, mRNA. ACCESSION XM_059368283 VERSION XM_059368283.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7516 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7516 /gene="LOC106087029" /note="uncharacterized LOC106087029; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106087029" CDS 814..5769 /gene="LOC106087029" /codon_start=1 /product="uncharacterized protein LOC106087029 isoform X3" /protein_id="XP_059224266.1" /db_xref="GeneID:106087029" /translation="MQSNTSRATLSAQSSGTPSASTISSSGKQQVVELSGYVIILVEN VDGKIKLYGSPPDRDNLEVGDEILEVNGLTLDNISRTEVIRHIHDCIKSCTICLRVRK KNDSRLAWDIGNSVQDAFVIAVEEHARERLQRLAALNRVTPVDITQLSKKLQQTKSGA PSTQKQDLSFLNEASPIYVTSFNSNHTACNSTTLTTAAAVATSTTGTAGLISATTITP TAVASTTTNASSAKPQTVPASGVGPLSAAIVAGAKTTATGNTSTVAPTGADRNANNCP QASVIAAAAVASSLAAASKQIPASVHHPLPTAAAAAAITAGAPASAATTTTSTTSILT NHNSIYQATALAKLPSSLPHKKLTIARSLQHLEVKEVDDDDDDLAALGANLCNINFIN YKNKHAEIPTPTTTGPLHVSPFVGNAPVIVAGPSSTLGRRKSQQSNSNTNTNPVTVSA TVDVHHSAHAAGASTAYHDHIPPPLQLPPPNKIYVDAQTLTSPRLAKNAQGGGVVVVG AAGDSLITKGGPTLNNNINNNNSLKTLSALSAAATASIKAPAVTATAANKATALQLNN NNSQQLPSYAVHHLGTLQQLTQKQQPATNATAILNAQLTSSSCSNQLSSNNSSIHSAS SASTQASSIITAPLSAGASSSAANTASTTATTKNLSSNLSNNCDLHISANNLQQQQQQ QHLQQQQHQHQQQPPRRELLTDDDEDETDDILQLNTNSLSNNLTQLNYSPNSSISRGG FELLLGDQSLRQDIRPRRRSGSSIVVLDSEDLKPCLPDVYNNLPHIRQPNEDTQEIDQ EMYTTMLKSINQDNGPHREMAVDCPDNFIARNKTPPRYPPPRPPQLNGSIKPVPPPRD TVRVEKDGRVQRSPLPPQLPDRRGMPGANSQQQQIAQIVEPTMEQLDSIKKYQEQLRR RREEEERIAQQNEFLRASLRGSRKLKALQDNKTGAQQQQPVAAERSVIGVENEAYVED EDVDKVKGYGDLIAALNRLQSQLTKNGMNTLAGRVSAAHNILSNPGVAHALAARAAVL QRRRSKATTPVSTNAMELQKDIVELLTKSNSAAAIELGNLLTSHEMEGLLLAHDRVAT HTDGTPSPSLSGAGSPQPISPSSAPLPPLPVPPKSASVRGTAVPPPVVPPPLAQRSAM PLPPNVPAHNATSTGYAHMKPAGSHRPDSPPLSACFGILNDQNDNIRIIQIEKSTEPL GATVRNEGEAVVIGRIVRGGAAEKSGLLHEGDEILEVNGQELRGKTVNDVCALLSTMQ GTLTFLIVPAGSPPPGGGHHRENAVLHVRAHFDYDPEDDLYIPCRELGISFQKGDVLH VISREDPNWWQAYREGEEDQTLAGLIPSQSFQHQRETMKLAIAEEAGLQGRNRGKDGG AKGSTLLCARKGRKKKKKASSEAGYPLYATTAPDETEPEEILTYEEVALYYPRATHKR PIVLIGPPNIGRHELRQRLMADSDRFSAAVPLFYLCQSKEKDCKKKNTSRTRREGEVP GVDYHFITRQAFEADILARRFVEHGEYEKAYYGTSLEAIRTVVASGKICVLNLHPQSL KLLRASDLKPYVVLVAPPSLDKLRQKKLRNGEPFKEEELKDIIATARDMEARWGHLFD MIIINNDTERAYHQLLAEINSLEREPQWVPASWVHNNRDES" polyA_site 7516 /gene="LOC106087029" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atactcgtcg ccgtcgttgt cgtttgtgga gccctaaaaa tagttacatc tttttttttt 61 gtttgaaaaa aatttcataa aaccaaagta attttactca aaaaggaaag tgttatagaa 121 tagctaagaa attgttgcca taaaaagagt tttaataatt tttttaccca attatatttt 181 ttcacggttt ccaatacatg gtgtgatata tttatgaaaa gcattttgtt ggccgaaaac 241 aaacgctact gagtttgaac agagctggca acgaaaaagg aaaaaattta ataaaaattc 301 aataacatta tcacctttga ttatagcaag ccaggagcac cataaaacct ttggcaaagg 361 tcaaatgtgg aaaaaatcca aataacaaaa tgtatcgctg attcggaaat tggtattaac 421 aaactattgg ttgccccgcc tctagtcctt cctctacaac aatcgcataa ctgggatttt 481 cgtttacgcc gttgtgattt ttgccccgca gactaccgtt ttgggtctgc atgcgtgcgt 541 gcgtgggctt tcgtgagttt gaatgcgggc aacgtgcccg caacgtgtgt gtgcgtcgtt 601 gtcgttgtcg tcgtcgtcgt tgttgttgtc ctagttcttc gtggcatagt gtatgctctt 661 tgtaattcat cccaaacatc aacttttcta ctattggaaa acttttcgca gaattctttg 721 ttgtgccatt agaagtttcc cctcaaagtt tgttttcttg cttactttca aagggcgtct 781 tatttttcgc tttggctttg ggcggctgct gcaatgcaat cgaataccag tcgtgctact 841 ttgagtgcac aatcctcggg aacaccatcg gcgtcaacga tatcatcatc aggcaagcaa 901 caagtggttg aattatctgg ttatgtcatt attctggtgg agaatgttga tggtaaaatt 961 aaattatatg gctctccacc cgatcgtgat aatttggaag tgggcgatga gatactcgaa 1021 gttaatggct taacattgga taatatttca cgaacggaag ttatacgaca catacacgat 1081 tgtattaaat cgtgtaccat atgtttacgg gttcgcaaga aaaatgattc caggctggct 1141 tgggatattg gcaattcagt gcaggacgca tttgttatag cggttgagga acatgcaaga 1201 gaacgtttgc aacgtttagc ggccttaaat cgtgtaacac ctgtggatat tactcagtta 1261 tcgaaaaagc tccaacaaac caaaagcggt gctccatcga cacaaaaaca ggacttaagt 1321 ttcctcaacg aagcctcccc catctatgtg acctcattca atagcaatca tacggcctgc 1381 aatagcacca ccctaacgac agcggcagcg gtagccacct ctactacggg gacagcgggg 1441 ctgataagtg caacaacaat aacgcccacg gctgttgcat ccacgacgac taatgccagt 1501 tcggctaagc cacagacagt accagccagc ggtgtaggtc cactatcggc agccatagta 1561 gcaggagcaa aaaccacagc aaccggaaac acctcaacag tagcaccaac aggagccgat 1621 agaaatgcca acaattgccc ccaggcctct gtaatagcag cagcagctgt agcatcctca 1681 ttagcggctg cctccaagca gataccagcc tcagttcacc acccactacc aacagcagca 1741 gcagcagcag caatcacagc aggagcccca gcatcagcgg ccacaacaac aacgtccaca 1801 acctcaatat tgacaaatca taatagcatt tatcaggcca cagccctagc gaaattgccc 1861 tcctcattgc cgcacaaaaa gctaaccatc gcacgcagcc tccaacattt ggaggttaag 1921 gaggtggacg atgacgatga tgatttggcc gcattaggtg ccaatttgtg taacatcaat 1981 ttcattaact acaagaacaa gcatgccgaa atacccacac ccacaaccac tggccccctg 2041 catgttagtc catttgtggg caacgcacct gtgatagtag caggtcccag ttccaccttg 2101 gggcgacgca aatcgcagca gagcaacagc aacaccaata cgaatcctgt taccgttagt 2161 gccacagttg atgttcatca ctcagctcat gcggcgggag catcaacagc ctatcacgat 2221 cacataccac cgcctttaca gttacccccg cccaataaga tctatgtgga tgcccaaaca 2281 ctgacctcgc cgcgcctggc caagaacgcc caaggaggag gagtagtagt agtaggagca 2341 gcaggcgatt ctttgatcac caaaggtggc ccaactttga acaacaatat caacaacaac 2401 aatagtctaa aaactttatc ggcattatcg gcggccgcca cagccagtat caaggcacca 2461 gccgtaactg ctactgctgc taacaaggcg acagctctgc aactgaacaa taacaactct 2521 caacagcttc cttcgtatgc ggtacatcat ttgggtacgc tacagcagct gacgcagaag 2581 cagcagccag caacgaatgc aactgcaatc cttaatgccc agttaacatc ttcctcgtgc 2641 tcgaatcagc tcagcagcaa caatagcagc attcacagtg catccagtgc atcgacgcaa 2701 gcatcatcaa taataacggc accattgtcg gcgggagcct catcatcagc agcaaataca 2761 gcatctacga cagcaacaac aaaaaatctt agcagtaatc ttagtaataa ttgtgattta 2821 catatatcag cgaataatct tcaacaacaa cagcaacaac aacatctaca acagcagcag 2881 caccagcacc agcaacaacc accgagaaga gagttactaa cagatgacga tgaagatgaa 2941 acagatgata ttttacaatt gaatacaaat agtttatcaa ataatttaac gcaactaaat 3001 tatagtccaa atagcagcat atcaagaggt ggatttgaac tactactggg tgatcaatcg 3061 ttaaggcaag atatcaggcc ccggcgtaga tccggctcta gtatagtggt tttagatagt 3121 gaagatttaa agccctgtct acccgatgtt tataataatc taccacatat acgacagcca 3181 aacgaagata cccaagagat tgatcaggaa atgtacacaa ccatgttgaa gtccataaat 3241 caagataatg gacctcatcg cgagatggct gttgattgtc cagataattt tatagcacgt 3301 aataaaacac caccacgtta tccgccaccc cgtccaccac agttaaatgg ctcgattaag 3361 ccggtgccac ctccacgtga cacagtgcgt gtggaaaaag atggacgtgt acagcgttca 3421 ccattgccgc cgcaattacc cgatcgtcga gggatgccgg gggcaaatag tcaacaacaa 3481 cagattgccc aaattgtgga gccaacaatg gaacaattgg atagtattaa gaaatatcag 3541 gaacaattgc gtcgccgacg agaagaggag gagaggattg cccaacagaa tgagtttttg 3601 cgtgccagct tacgaggttc acgaaagctt aaagctttgc aggataataa aactggcgcc 3661 caacagcagc aaccggtagc agcagaacgt tctgttattg gggtagaaaa tgaagcctat 3721 gtggaggatg aggatgtgga taaagttaaa ggctatggtg atttaattgc cgccttaaac 3781 cgtctccaga gtcagctaac caaaaatggc atgaacacac tcgcaggccg agtgtcggcc 3841 gctcacaata ttctctccaa tccgggcgta gcccatgcct tggctgcccg tgccgcggtg 3901 ctgcaacgtc gacgctccaa agccaccact ccagtcagta caaatgccat ggaattgcaa 3961 aaggatatcg tggagctcct aaccaagtcc aattctgcag cggccattga attgggcaac 4021 ttgctgacaa gtcacgaaat ggagggccta ctattggccc atgatcgtgt ggccacccac 4081 acagatggta caccatcacc atcgctaagt ggggccggca gtcctcagcc catatcgcct 4141 agttcggcac cccttccacc tctgcctgta ccaccaaaat ctgcctctgt aaggggcaca 4201 gcagtgccac cacctgtggt gccgcctcca ttggcccaac gcagtgcaat gcctttacct 4261 cccaatgttc cagcccataa tgccaccagc accggctatg cccatatgaa gccggccggt 4321 tcgcataggc cggactcgcc gccactgagt gcctgctttg gtatactcaa cgatcaaaat 4381 gacaatatac gtattataca aattgagaaa tcgactgaac ccctaggtgc cacagtacgc 4441 aatgaaggtg aggcggtagt cataggccgc atagtaaggg gaggagctgc cgaaaagtcc 4501 ggccttctac acgagggcga tgaaatactc gaggtgaatg gtcaagagtt gcgcggcaag 4561 acggtgaatg atgtttgcgc cttgctaagc accatgcagg gcaccctcac ctttttgata 4621 gtgcccgctg gcagtcctcc acctggtggc ggccatcatc gtgaaaatgc tgtcttacat 4681 gtgcgggctc atttcgatta tgatccggaa gatgatttgt atataccttg ccgtgagctg 4741 ggcattagtt tccaaaaggg tgatgttcta catgtcatct cgagggagga tccaaattgg 4801 tggcaagcat atcgtgaggg tgaagaagac caaactttgg ccggtctaat acctagtcaa 4861 tcattccaac atcaaaggga aaccatgaaa ttggccatag ccgaagaggc gggtctgcaa 4921 ggcagaaatc gtggcaaaga tggtggggca aagggatcaa cgctgctgtg tgcacgcaag 4981 ggacgcaaga agaagaagaa ggccagttcg gaagcaggat atcctttata tgccaccacc 5041 gcccccgatg aaactgaacc cgaggaaata ctcacctatg aagaggttgc cttgtactat 5101 ccccgagcca cacacaaacg tcccattgtt ctaataggcc cacccaatat aggacgtcat 5161 gaattgcgtc agcgtcttat ggcggattcc gatcggtttt cagcagcagt gccacttttc 5221 tatttatgtc aatcaaaaga aaaggattgc aaaaagaaga atacctcccg cacccgtcgt 5281 gaaggcgaag ttcctggtgt cgactatcat tttatcacac gccaggcttt tgaagctgat 5341 attttggctc gtcgctttgt ggagcatggt gaatatgaaa aagcttacta tggcacttcc 5401 ttggaagcca tacgtacagt tgtggccagt ggtaaaatct gtgttcttaa tctacatcca 5461 caaagtctta aacttttaag agcctcggat ttgaaaccct atgttgtgct ggtggctcca 5521 cctagtctag ataaactaag acaaaagaaa ttacgcaatg gtgaaccatt taaggaggag 5581 gagctaaaag atatcattgc taccgcccga gacatggagg cccgctgggg tcatttattc 5641 gatatgatca ttattaataa tgataccgaa agagcttatc atcaattgtt ggccgagatt 5701 aattcattgg aacgtgagcc tcaatgggtg ccagccagct gggtgcataa caatagggat 5761 gagtcataat tttttaataa aaaaaaaaaa acttgaaaca aattttaaga tttaggcaaa 5821 cagctaagaa aaaattggaa gggaatttta aaacaaaaat tgtaaataaa acatgatatt 5881 aagcaaaagg atttgtgaac agaaaaaaaa attaagaaat cataatttat acaaaatgaa 5941 gaaaacattt atatatgcaa tattttttat tattattatt ataattttta ttgattgaga 6001 aatttgttaa tgtagatata acaattgtgt ttgaatgtgg tgtttttaca tccaaattta 6061 ctatataagt aaataatata attaaaaaaa aaaaaacaaa aacatgaata aaattaatgt 6121 gtatattatt atttttttta atgaatttct tttcaaaccc cgaaaatcac aaatagtttt 6181 tttttaatac ataacactta acaataacta tattacataa aagaaaattt gtttgacaaa 6241 tatcgaatgt aagtataata aaaaaaacaa aaaatcttcc ttaatttcca ctttttatgt 6301 agaaacctaa aaatgtctag aaattataaa aaaaaaattt tgttttgtgt ttttttaata 6361 atttgtaaac taaacattcc atttatttct ttttttacat atataaaata tgtttttaaa 6421 attttatgtt ttaattttct ttttaataaa aaaaaacaaa gaaaactcta agctaaactt 6481 taaaaaaact ataaaaaaaa aattaaaaaa ttatatagtt gttattgaaa ataaagaaaa 6541 agacaacata caaaacaaaa tgtataactt ctaagcaaat gttaaaagca gatggtctta 6601 acaataacag caaaccaact aataaacaat tttatgaatc caaaaatcaa caacaacaac 6661 aacaccccat ttactttatt gcaaaaccaa gaacagcaac aactacaaca tcattaaatg 6721 tatgttaagt ataagaaaaa tcgaaggaca tcaatcctac tgctagtaaa gttttcatag 6781 cctaaagaaa acgtgttaca ttctaaacta atcctcgata tacatcaaaa agaaatatta 6841 acaaaactgc aagcaaaaaa tatcgaaaat ttgtatttaa agaaaacaaa aaaaaaatac 6901 aatgaataaa aatacttcca cttgttaaat atcttgaaac cctgccccac tttatagatt 6961 ttgttacaaa atttgagtac agagttgtgt ttttctgaag aaacgaaaat acaattccaa 7021 tgttaaaatt ctgttaacat tttgtaagtg aaatatgaaa ttcaacagaa accttgcaaa 7081 aaatacatac cctatagaaa aacacatata tcatccgaca tgttttccat atatacgtac 7141 atacatatat attgtcacat taatatattt gtatattgtt ttcataattt tgtagttaaa 7201 tggaaattat tttttgtgtt ttattgattg ttttttttta tataacatat acatgaatgg 7261 ataatggaag cataacctcc accaccacca acaacacccc ttaggacaaa agcaaacgaa 7321 tctgaaagtg aagcgaaaaa gtatacataa aaataaaaag ccaacaacaa caacaacaaa 7381 tgaaaacata ttagaattta gcaaagtaac tgagaaatgg taacatacaa aaaaaaacta 7441 tatcgataaa aagaagaaaa aatcactaac agagaaaaaa tcaagaagat tataaaacag 7501 agcaagaaaa aagaaa