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LOCUS XM_059368281 8452 bp mRNA linear INV 02-SEP-2023 (LOC106087029), transcript variant X1, mRNA. ACCESSION XM_059368281 VERSION XM_059368281.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8452 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..8452 /gene="LOC106087029" /note="uncharacterized LOC106087029; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106087029" CDS 820..6705 /gene="LOC106087029" /codon_start=1 /product="uncharacterized protein LOC106087029 isoform X1" /protein_id="XP_059224264.1" /db_xref="GeneID:106087029" /translation="MQSNTSRATLSAQSSGTPSASTISSSGKQQVVELSGYVIILVEN VDGKIKLYGSPPDRDNLEVGDEILEVNGLTLDNISRTEVIRHIHDCIKSCTICLRVRK KNDSRLAWDIGNSVQDAFVIAVEEHARERLQRLAALNRVTPVDITQLSKKLQQTKSGA PSTQKQDLSFLNEASPIYVTSFNSNHTACNSTTLTTAAAVATSTTGTAGLISATTITP TAVASTTTNASSAKPQTVPASGVGPLSAAIVAGAKTTATGNTSTVAPTGADRNANNCP QASVIAAAAVASSLAAASKQIPASVHHPLPTAAAAAAITAGAPASAATTTTSTTSILT NHNSIYQATALAKLPSSLPHKKLTIARSLQHLEVKEVDDDDDDLAALGANLCNINFIN YKNKHAEIPTPTTTGPLHVSPFVGNAPVIVAGPSSTLGRRKSQQSNSNTNTNPVTVSA TVDVHHSAHAAGASTAYHDHIPPPLQLPPPNKIYVDAQTLTSPRLAKNAQGGGVVVVG AAGDSLITKGGPTLNNNINNNNSLKTLSALSAAATASIKAPAVTATAANKATALQLNN NNSQQLPSYAVHHLGTLQQLTQKQQPATNATAILNAQLTSSSCSNQLSSNNSSIHSAS SASTQASSIITAPLSAGASSSAANTASTTATTKNLSSNLSNNCDLHISANNLQQQQQQ QHLQQQQHQHQQQPPRRELLTDDDEDETDDILQLNTNSLSNNLTQLNYSPNSSISRGG FELLLGDQSLRQDIRPRRRSGSSIVVLDSEDLKPCLPDVYNNLPHIRQPNEDTQEIDQ EMYTTMLKSINQDNGPHREMAVDCPDNFIARNKTPPRYPPPRPPQQKQLNNALALGGK GKMSVALNPNGGGGGSLTSPEELDLMVVDALYRKGSSSHSSSYESEVLSKKSSESFDS ISYRQLQNNNNDLIGKESQHNSNSNSSSSSCSNPKQKVVSMNGNGVASLLSNAASIIN GGGNSSSGGGNNSGSGESLPSITSTGSTPPPEYELKELSSKNSILPPVIKHRELPVDV PDSFIEMVKTPPRYPPPAHLSSLSSQISSCSSASTANTTLTRINSSNNSNTESHNMSL SPQSLKMHHQTQETSMISTMSLNGSFEDFQNQQQQQQQQQNQQQQSGNQIPQPQVAIM PAKRTDELNGSIKPVPPPRDTVRVEKDGRVQRSPLPPQLPDRRGMPGANSQQQQIAQI VEPTMEQLDSIKKYQEQLRRRREEEERIAQQNEFLRASLRGSRKLKALQDNKTGAQQQ QPVAAERSVIGVENEAYVEDEDVDKVKGYGDLIAALNRLQSQLTKNGMNTLAGRVSAA HNILSNPGVAHALAARAAVLQRRRSKATTPVSTNAMELQKDIVELLTKSNSAAAIELG NLLTSHEMEGLLLAHDRVATHTDGTPSPSLSGAGSPQPISPSSAPLPPLPVPPKSASV RGTAVPPPVVPPPLAQRSAMPLPPNVPAHNATSTGYAHMKPAGSHRPDSPPLSACFGI LNDQNDNIRIIQIEKSTEPLGATVRNEGEAVVIGRIVRGGAAEKSGLLHEGDEILEVN GQELRGKTVNDVCALLSTMQGTLTFLIVPAGSPPPGGGHHRENAVLHVRAHFDYDPED DLYIPCRELGISFQKGDVLHVISREDPNWWQAYREGEEDQTLAGLIPSQSFQHQRETM KLAIAEEAGLQGRNRGKDGGAKGSTLLCARKGRKKKKKASSEAGYPLYATTAPDETEP EEILTYEEVALYYPRATHKRPIVLIGPPNIGRHELRQRLMADSDRFSAAVPLFYLCQS KEKDCKKKNTSRTRREGEVPGVDYHFITRQAFEADILARRFVEHGEYEKAYYGTSLEA IRTVVASGKICVLNLHPQSLKLLRASDLKPYVVLVAPPSLDKLRQKKLRNGEPFKEEE LKDIIATARDMEARWGHLFDMIIINNDTERAYHQLLAEINSLEREPQWVPASWVHNNR DES" polyA_site 8452 /gene="LOC106087029" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ataatcatac tcgtcgccgt cgttgtcgtt tgtggagccc taaaaatagt tacatctttt 61 ttttttgttt gaaaaaaatt tcataaaacc aaagtaattt tactcaaaaa ggaaagtgtt 121 atagaatagc taagaaattg ttgccataaa aagagtttta ataatttttt tacccaatta 181 tattttttca cggtttccaa tacatggtgt gatatattta tgaaaagcat tttgttggcc 241 gaaaacaaac gctactgagt ttgaacagag ctggcaacga aaaaggaaaa aatttaataa 301 aaattcaata acattatcac ctttgattat agcaagccag gagcaccata aaacctttgg 361 caaaggtcaa atgtggaaaa aatccaaata acaaaatgta tcgctgattc ggaaattggt 421 attaacaaac tattggttgc cccgcctcta gtccttcctc tacaacaatc gcataactgg 481 gattttcgtt tacgccgttg tgatttttgc cccgcagact accgttttgg gtctgcatgc 541 gtgcgtgcgt gggctttcgt gagtttgaat gcgggcaacg tgcccgcaac gtgtgtgtgc 601 gtcgttgtcg ttgtcgtcgt cgtcgttgtt gttgtcctag ttcttcgtgg catagtgtat 661 gctctttgta attcatccca aacatcaact tttctactat tggaaaactt ttcgcagaat 721 tctttgttgt gccattagaa gtttcccctc aaagtttgtt ttcttgctta ctttcaaagg 781 gcgtcttatt tttcgctttg gctttgggcg gctgctgcaa tgcaatcgaa taccagtcgt 841 gctactttga gtgcacaatc ctcgggaaca ccatcggcgt caacgatatc atcatcaggc 901 aagcaacaag tggttgaatt atctggttat gtcattattc tggtggagaa tgttgatggt 961 aaaattaaat tatatggctc tccacccgat cgtgataatt tggaagtggg cgatgagata 1021 ctcgaagtta atggcttaac attggataat atttcacgaa cggaagttat acgacacata 1081 cacgattgta ttaaatcgtg taccatatgt ttacgggttc gcaagaaaaa tgattccagg 1141 ctggcttggg atattggcaa ttcagtgcag gacgcatttg ttatagcggt tgaggaacat 1201 gcaagagaac gtttgcaacg tttagcggcc ttaaatcgtg taacacctgt ggatattact 1261 cagttatcga aaaagctcca acaaaccaaa agcggtgctc catcgacaca aaaacaggac 1321 ttaagtttcc tcaacgaagc ctcccccatc tatgtgacct cattcaatag caatcatacg 1381 gcctgcaata gcaccaccct aacgacagcg gcagcggtag ccacctctac tacggggaca 1441 gcggggctga taagtgcaac aacaataacg cccacggctg ttgcatccac gacgactaat 1501 gccagttcgg ctaagccaca gacagtacca gccagcggtg taggtccact atcggcagcc 1561 atagtagcag gagcaaaaac cacagcaacc ggaaacacct caacagtagc accaacagga 1621 gccgatagaa atgccaacaa ttgcccccag gcctctgtaa tagcagcagc agctgtagca 1681 tcctcattag cggctgcctc caagcagata ccagcctcag ttcaccaccc actaccaaca 1741 gcagcagcag cagcagcaat cacagcagga gccccagcat cagcggccac aacaacaacg 1801 tccacaacct caatattgac aaatcataat agcatttatc aggccacagc cctagcgaaa 1861 ttgccctcct cattgccgca caaaaagcta accatcgcac gcagcctcca acatttggag 1921 gttaaggagg tggacgatga cgatgatgat ttggccgcat taggtgccaa tttgtgtaac 1981 atcaatttca ttaactacaa gaacaagcat gccgaaatac ccacacccac aaccactggc 2041 cccctgcatg ttagtccatt tgtgggcaac gcacctgtga tagtagcagg tcccagttcc 2101 accttggggc gacgcaaatc gcagcagagc aacagcaaca ccaatacgaa tcctgttacc 2161 gttagtgcca cagttgatgt tcatcactca gctcatgcgg cgggagcatc aacagcctat 2221 cacgatcaca taccaccgcc tttacagtta cccccgccca ataagatcta tgtggatgcc 2281 caaacactga cctcgccgcg cctggccaag aacgcccaag gaggaggagt agtagtagta 2341 ggagcagcag gcgattcttt gatcaccaaa ggtggcccaa ctttgaacaa caatatcaac 2401 aacaacaata gtctaaaaac tttatcggca ttatcggcgg ccgccacagc cagtatcaag 2461 gcaccagccg taactgctac tgctgctaac aaggcgacag ctctgcaact gaacaataac 2521 aactctcaac agcttccttc gtatgcggta catcatttgg gtacgctaca gcagctgacg 2581 cagaagcagc agccagcaac gaatgcaact gcaatcctta atgcccagtt aacatcttcc 2641 tcgtgctcga atcagctcag cagcaacaat agcagcattc acagtgcatc cagtgcatcg 2701 acgcaagcat catcaataat aacggcacca ttgtcggcgg gagcctcatc atcagcagca 2761 aatacagcat ctacgacagc aacaacaaaa aatcttagca gtaatcttag taataattgt 2821 gatttacata tatcagcgaa taatcttcaa caacaacagc aacaacaaca tctacaacag 2881 cagcagcacc agcaccagca acaaccaccg agaagagagt tactaacaga tgacgatgaa 2941 gatgaaacag atgatatttt acaattgaat acaaatagtt tatcaaataa tttaacgcaa 3001 ctaaattata gtccaaatag cagcatatca agaggtggat ttgaactact actgggtgat 3061 caatcgttaa ggcaagatat caggccccgg cgtagatccg gctctagtat agtggtttta 3121 gatagtgaag atttaaagcc ctgtctaccc gatgtttata ataatctacc acatatacga 3181 cagccaaacg aagataccca agagattgat caggaaatgt acacaaccat gttgaagtcc 3241 ataaatcaag ataatggacc tcatcgcgag atggctgttg attgtccaga taattttata 3301 gcacgtaata aaacaccacc acgttatccg ccaccccgtc caccacagca gaagcagctt 3361 aacaatgccc tggccttggg gggcaaaggc aaaatgtcgg tggcccttaa tcccaatgga 3421 ggcggaggtg gttcgctgac atcgcctgag gaattggatt taatggtggt ggatgctctc 3481 tatcgcaaag gttcctcctc tcattcgtct tcgtatgaaa gtgaggtctt gagtaaaaag 3541 tcctcggaat cctttgattc catatcctat cgtcaactgc agaacaataa caatgacttg 3601 attggcaaag aatctcagca caactccaat tcaaattcat cgtcgtcatc ttgctcgaat 3661 cccaagcaaa aagtggttag catgaatggc aatggtgtgg ccagtctctt gagcaatgcg 3721 gcctccatca ttaatggtgg tggcaatagc agcagcggtg gaggcaataa cagtggcagt 3781 ggcgaatcct tgcccagcat aacgagcaca ggttctacgc cgccgccgga atatgaactc 3841 aaagaattgt cctccaaaaa ttccatttta cctcctgtta tcaagcatcg cgaactgccg 3901 gtagatgtac ccgatagctt cattgaaatg gttaagactc cccccagata tcctcctccc 3961 gcccatttgt cctcattatc ctcacaaata tcttcctgca gttcggcctc caccgccaat 4021 accaccttga cgcgcatcaa ctcttcgaat aattccaata ccgagtcaca taatatgagc 4081 ttgtcgccgc aatcgctaaa aatgcatcac caaactcaag agacttccat gatatccacc 4141 atgtctctga atggatcctt tgaggatttc caaaatcagc agcagcagca acaacaacaa 4201 caaaaccagc agcagcaatc aggcaatcaa ataccacagc ctcaagtggc tataatgcct 4261 gcaaaacgta ccgatgagtt aaatggctcg attaagccgg tgccacctcc acgtgacaca 4321 gtgcgtgtgg aaaaagatgg acgtgtacag cgttcaccat tgccgccgca attacccgat 4381 cgtcgaggga tgccgggggc aaatagtcaa caacaacaga ttgcccaaat tgtggagcca 4441 acaatggaac aattggatag tattaagaaa tatcaggaac aattgcgtcg ccgacgagaa 4501 gaggaggaga ggattgccca acagaatgag tttttgcgtg ccagcttacg aggttcacga 4561 aagcttaaag ctttgcagga taataaaact ggcgcccaac agcagcaacc ggtagcagca 4621 gaacgttctg ttattggggt agaaaatgaa gcctatgtgg aggatgagga tgtggataaa 4681 gttaaaggct atggtgattt aattgccgcc ttaaaccgtc tccagagtca gctaaccaaa 4741 aatggcatga acacactcgc aggccgagtg tcggccgctc acaatattct ctccaatccg 4801 ggcgtagccc atgccttggc tgcccgtgcc gcggtgctgc aacgtcgacg ctccaaagcc 4861 accactccag tcagtacaaa tgccatggaa ttgcaaaagg atatcgtgga gctcctaacc 4921 aagtccaatt ctgcagcggc cattgaattg ggcaacttgc tgacaagtca cgaaatggag 4981 ggcctactat tggcccatga tcgtgtggcc acccacacag atggtacacc atcaccatcg 5041 ctaagtgggg ccggcagtcc tcagcccata tcgcctagtt cggcacccct tccacctctg 5101 cctgtaccac caaaatctgc ctctgtaagg ggcacagcag tgccaccacc tgtggtgccg 5161 cctccattgg cccaacgcag tgcaatgcct ttacctccca atgttccagc ccataatgcc 5221 accagcaccg gctatgccca tatgaagccg gccggttcgc ataggccgga ctcgccgcca 5281 ctgagtgcct gctttggtat actcaacgat caaaatgaca atatacgtat tatacaaatt 5341 gagaaatcga ctgaacccct aggtgccaca gtacgcaatg aaggtgaggc ggtagtcata 5401 ggccgcatag taaggggagg agctgccgaa aagtccggcc ttctacacga gggcgatgaa 5461 atactcgagg tgaatggtca agagttgcgc ggcaagacgg tgaatgatgt ttgcgccttg 5521 ctaagcacca tgcagggcac cctcaccttt ttgatagtgc ccgctggcag tcctccacct 5581 ggtggcggcc atcatcgtga aaatgctgtc ttacatgtgc gggctcattt cgattatgat 5641 ccggaagatg atttgtatat accttgccgt gagctgggca ttagtttcca aaagggtgat 5701 gttctacatg tcatctcgag ggaggatcca aattggtggc aagcatatcg tgagggtgaa 5761 gaagaccaaa ctttggccgg tctaatacct agtcaatcat tccaacatca aagggaaacc 5821 atgaaattgg ccatagccga agaggcgggt ctgcaaggca gaaatcgtgg caaagatggt 5881 ggggcaaagg gatcaacgct gctgtgtgca cgcaagggac gcaagaagaa gaagaaggcc 5941 agttcggaag caggatatcc tttatatgcc accaccgccc ccgatgaaac tgaacccgag 6001 gaaatactca cctatgaaga ggttgccttg tactatcccc gagccacaca caaacgtccc 6061 attgttctaa taggcccacc caatatagga cgtcatgaat tgcgtcagcg tcttatggcg 6121 gattccgatc ggttttcagc agcagtgcca cttttctatt tatgtcaatc aaaagaaaag 6181 gattgcaaaa agaagaatac ctcccgcacc cgtcgtgaag gcgaagttcc tggtgtcgac 6241 tatcatttta tcacacgcca ggcttttgaa gctgatattt tggctcgtcg ctttgtggag 6301 catggtgaat atgaaaaagc ttactatggc acttccttgg aagccatacg tacagttgtg 6361 gccagtggta aaatctgtgt tcttaatcta catccacaaa gtcttaaact tttaagagcc 6421 tcggatttga aaccctatgt tgtgctggtg gctccaccta gtctagataa actaagacaa 6481 aagaaattac gcaatggtga accatttaag gaggaggagc taaaagatat cattgctacc 6541 gcccgagaca tggaggcccg ctggggtcat ttattcgata tgatcattat taataatgat 6601 accgaaagag cttatcatca attgttggcc gagattaatt cattggaacg tgagcctcaa 6661 tgggtgccag ccagctgggt gcataacaat agggatgagt cataattttt taataaaaaa 6721 aaaaaaactt gaaacaaatt ttaagattta ggcaaacagc taagaaaaaa ttggaaggga 6781 attttaaaac aaaaattgta aataaaacat gatattaagc aaaaggattt gtgaacagaa 6841 aaaaaaatta agaaatcata atttatacaa aatgaagaaa acatttatat atgcaatatt 6901 ttttattatt attattataa tttttattga ttgagaaatt tgttaatgta gatataacaa 6961 ttgtgtttga atgtggtgtt tttacatcca aatttactat ataagtaaat aatataatta 7021 aaaaaaaaaa aacaaaaaca tgaataaaat taatgtgtat attattattt tttttaatga 7081 atttcttttc aaaccccgaa aatcacaaat agtttttttt taatacataa cacttaacaa 7141 taactatatt acataaaaga aaatttgttt gacaaatatc gaatgtaagt ataataaaaa 7201 aaacaaaaaa tcttccttaa tttccacttt ttatgtagaa acctaaaaat gtctagaaat 7261 tataaaaaaa aaattttgtt ttgtgttttt ttaataattt gtaaactaaa cattccattt 7321 atttcttttt ttacatatat aaaatatgtt tttaaaattt tatgttttaa ttttcttttt 7381 aataaaaaaa aacaaagaaa actctaagct aaactttaaa aaaactataa aaaaaaaatt 7441 aaaaaattat atagttgtta ttgaaaataa agaaaaagac aacatacaaa acaaaatgta 7501 taacttctaa gcaaatgtta aaagcagatg gtcttaacaa taacagcaaa ccaactaata 7561 aacaatttta tgaatccaaa aatcaacaac aacaacaaca ccccatttac tttattgcaa 7621 aaccaagaac agcaacaact acaacatcat taaatgtatg ttaagtataa gaaaaatcga 7681 aggacatcaa tcctactgct agtaaagttt tcatagccta aagaaaacgt gttacattct 7741 aaactaatcc tcgatataca tcaaaaagaa atattaacaa aactgcaagc aaaaaatatc 7801 gaaaatttgt atttaaagaa aacaaaaaaa aaatacaatg aataaaaata cttccacttg 7861 ttaaatatct tgaaaccctg ccccacttta tagattttgt tacaaaattt gagtacagag 7921 ttgtgttttt ctgaagaaac gaaaatacaa ttccaatgtt aaaattctgt taacattttg 7981 taagtgaaat atgaaattca acagaaacct tgcaaaaaat acatacccta tagaaaaaca 8041 catatatcat ccgacatgtt ttccatatat acgtacatac atatatattg tcacattaat 8101 atatttgtat attgttttca taattttgta gttaaatgga aattattttt tgtgttttat 8161 tgattgtttt tttttatata acatatacat gaatggataa tggaagcata acctccacca 8221 ccaccaacaa caccccttag gacaaaagca aacgaatctg aaagtgaagc gaaaaagtat 8281 acataaaaat aaaaagccaa caacaacaac aacaaatgaa aacatattag aatttagcaa 8341 agtaactgag aaatggtaac atacaaaaaa aaactatatc gataaaaaga agaaaaaatc 8401 actaacagag aaaaaatcaa gaagattata aaacagagca agaaaaaaga aa