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LOCUS XM_059368269 4379 bp mRNA linear INV 02-SEP-2023 (LOC106083902), transcript variant X9, mRNA. ACCESSION XM_059368269 VERSION XM_059368269.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4379 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4379 /gene="LOC106083902" /note="syntaxin-binding protein 5; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins" /db_xref="GeneID:106083902" CDS 711..4115 /gene="LOC106083902" /codon_start=1 /product="syntaxin-binding protein 5 isoform X6" /protein_id="XP_059224252.1" /db_xref="GeneID:106083902" /translation="MKKFTFRGVLDGFRQTVQPQTARQEQEIHETLRPDHFTIRKTFR HGFPYSPTTFAFDPVQRLLVIGDKSGSLRLLGRPGVDTHISHEGESACPVILSEFLVN DGKLVTVTADDTIHLWNIRQKVPQVIQSLKFQRERVTCIHLAVASKWLYVGTEKGNIH VVNIETFALSGYVINWNKAIELARANHPGAVIALCDNPIDANKLLIAYECGLLVLWDL KSKFAEIRWVSSDPVKSIAWHYEGKYFVSSHKDGSICSWPMKPTPKPQSLVYPHAKTS REGTVEKCNPIYKVDLKASQSGETFTIFSGGMPTEKGAKSNCITVMVGKTTTVLEMEH AVVDFITLCENPWTSETQEPYAIAVLLQYDLVLIDLLTPGFPCFESPYPMDLHESPVT YCTYLTDCPSDLVPAFYSVGRTTTSKKTGFSEREWPVSGGEWSPASCSYAEIVITGHQ DGTIKFWDSGAGTLQILYKLKTAKIFEKSKSLQTDSGVEHPLAIQLIHLCSVSRRLCV AGAMGQVILFKFRKVETTSDVLVLEIPILFENFDDIYGTSPECDFIPHQVQKTESSES DKTDNLLRVKTGAQRKPPGFQSQLVCLTTGPNKRIVQVTSLCISSTYGLMAYGTEYGL VIIDIIQKVCLLSIACPDLYGAHDPYSRTPKSPKRIETKDQDQSRSPSSDQVRLRKFT FFIIFCNHFSKKQKLDGSFSRSRSSSMSSIDMSSAESVTCLAFIESYAKKNDMLSIVP TLWVGTSFGSILTLVVTMPEREVRKSQPVLVTINGGPVLRLKGSITSMSFLDAYGTII PFSSEPWRDDSRDTKKERTPTKSSSRTSPTFTPTTANTISNTSGGNVSTSASSSGISG SVSTGLDTIADRQYIVIASEKQTKVFDIANQCCINRIQLSEMDFAVKAKTITMKDGTC LATYLSNGHLMVHSLPSLKLLLDTEFLPLMDLSFQTKCKQGIVDPMLSIWGQQIIVHE DITQISKIFCFSNKGHGLYMASPTEIQKFTISSEFCQFILDMMGSLYTVQEMPEQPKE SFFKGLFGGGAKSLDREELFGEQSGKANRSVAKHIPGPTLEQLNQRASTAASEISRAH LLAMERGEKLNMLEERAERMANQAQDFSGTAHQLMLKYKDKKWYQL" polyA_site 4379 /gene="LOC106083902" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgtttagttt tatattatcc tttgaagtct gcggatgtaa ttgtagaatt aaaaaagaag 61 aacaacgcac aaaacctata tctttaccta tacacaaaaa aacaagaaaa aaatttcact 121 ctcatacata catacctaca aacagaattg aaactgaaat tggaaaaaaa aaattcaaaa 181 aaagaaagaa agaaaaaaaa aacgcaaaaa ccccaaaata ttcgaattgt taactaagaa 241 aaaaaaatgt tctagagttt tgtattaaat cttctatgtg aaagagagaa aagaaaaaaa 301 ctatgacaat attttcatgt taaatattgc cccttttttg aatgtgaatg tgtgtggtgt 361 atgtgttttc ttttgcatgg tgcttacaga cagtggtttg aatttttgtg ctggtcataa 421 attcctgtag gaatcgccta aaacgtttcg cttgcgtcgg ggtgctacgc aaaaagattt 481 ttttcgttac atgtgtgaac acaacaaatg gagaataata aattacataa taacggagtg 541 aataatacca aattgaaaga tagtcacaaa aatagtaatt ggtactataa gaaaatttta 601 tgaattcaat gggcaaatgg attatttgta agattggctg ctgcaaactt actgtaaagc 661 tacaagtcct ctacaacaca aattccaaaa aatcattcta tgtgtaaaaa atgaaaaagt 721 tcacatttag aggcgttctt gatggatttc gacaaacggt tcagccgcaa actgcaagac 781 aagagcagga gattcatgag acccttagac cagaccattt tacgataaga aagacctttc 841 gtcatggatt tccctactct ccaacgacat ttgcatttga tccagtacaa aggctgttag 901 ttattggcga caaatcgggc agtctaagat tattgggccg tccgggtgtg gatactcata 961 tcagtcatga aggtgaatct gcatgtcccg taattctatc cgaattttta gtcaatgatg 1021 gaaaattggt aaccgtgacc gcagatgaca caatacattt gtggaatata cgccaaaaag 1081 tacctcaagt catacaaagc ttaaaatttc aacgagaaag agtaacatgc attcacttag 1141 cagtggcaag caaatggctg tatgttggca cagaaaaagg caacattcat gtggtcaaca 1201 tagagacatt tgcccttagc ggttacgtta taaactggaa caaagcaatt gaattggcta 1261 gagctaatca tcctggtgct gtgattgcat tatgtgataa tccaatagat gcaaataagt 1321 tgttgattgc atacgaatgt ggtttgcttg tcctttggga cttgaaatcc aaatttgccg 1381 agatcagatg ggtatcctcg gatccggtga agtcaatagc atggcattat gaaggaaaat 1441 attttgtatc ctcgcataaa gatggttcca tatgttcatg gcctatgaag ccgaccccaa 1501 aacctcaatc tctagtctat cctcatgcca aaacatcgag agagggtacg gttgaaaaat 1561 gcaatccaat ttacaaagtt gatttgaaag cttctcaatc tggagaaacc tttacgattt 1621 tttcgggtgg tatgccaaca gagaagggag caaaatccaa ttgtatcact gttatggtgg 1681 ggaagacaac caccgtctta gaaatggaac atgctgttgt tgattttata acactttgtg 1741 aaaacccttg gactagtgaa acccaagaac catatgcgat agcagtactt ctgcagtatg 1801 atttagtatt aatagactta cttacacccg gttttccatg tttcgaatcg ccttatccca 1861 tggacttaca cgaatcacct gttacatatt gcacttactt aactgattgc ccctcggatt 1921 tggttcctgc tttttactct gttggccgta ctacgacatc taaaaaaact ggtttctccg 1981 aaagagaatg gcctgtatca ggtggagaat ggtcaccagc gtcttgtagt tatgccgaaa 2041 tagtcataac aggtcatcaa gatggcacca taaaattttg ggattctggt gcaggcacat 2101 tacagatttt atataaactg aagacagcaa agatatttga aaaatccaaa tccctacaaa 2161 cagacagcgg tgtggaacat cctctggcaa ttcaattaat acatctttgc tctgtgtcca 2221 gacgtttatg tgttgcgggc gcaatgggcc aagtaatttt gtttaaattt cgcaaagttg 2281 aaaccacttc agacgttttg gttctggaga ttccaatact ctttgagaac tttgatgata 2341 tttatggtac tagtccggaa tgtgatttta taccacatca agttcaaaaa actgaatcaa 2401 gtgaatctga taagacggac aatttactac gagtcaaaac aggagcacaa cgaaagcctc 2461 cagggtttca gtcacagtta gtttgtttaa caactggccc aaataagaga attgttcaag 2521 tcacatcatt atgtatcagt tctacatatg gattaatggc ttatggcacg gaatatggac 2581 ttgttattat cgatattata cagaaagtct gcttattgag cattgcctgt cccgacttgt 2641 atggtgcgca cgatccctat tcgcgaacac ccaaaagtcc caaacgcatt gaaaccaagg 2701 atcaggatca gagtcgctca cccagctccg atcaggtccg tttgcgaaaa tttacttttt 2761 tcataatatt ttgtaatcat ttctctaaaa aacaaaaatt ggatgggtca ttttcaagat 2821 ctagatcatc gtcgatgtcg agcatcgaca tgtcttccgc agagtctgta acctgtttgg 2881 cttttattga aagctatgcc aaaaagaatg acatgctctc tatagtccca actttgtggg 2941 ttggcacaag ttttggttcc atactaacgc tggtcgttac catgcctgaa cgtgaagtgc 3001 gcaaatctca accagttttg gtcacaatta atggcggtcc agtattacgt ctaaaaggat 3061 caataacatc aatgtcattt ttggatgctt atggcacaat tataccattt tcctctgaac 3121 catggcgaga tgacagtagg gatacaaaaa aagaacgaac gccaacaaaa agtagcagtc 3181 gaacaagtcc tacatttaca cctacaactg ccaatacaat atcaaataca tctggtggta 3241 atgtgagtac cagtgccagt agcagtggta ttagtggaag cgttagcacc ggcctagata 3301 ccatagctga tagacaatat atcgtaattg caagcgaaaa acaaactaaa gtcttcgata 3361 ttgcaaatca atgttgtatt aatcgcattc aattatctga aatggatttt gcggttaaag 3421 caaaaactat cacaatgaaa gatggaactt gcctagcaac ctatctttcc aatggccatc 3481 taatggtaca tagtcttcct agtctaaagt tgttattgga tacagagttc ttaccactta 3541 tggacttaag ttttcaaacc aaatgcaaac agggaattgt ggatccaatg ctttccatat 3601 ggggtcaaca aatcattgtt cacgaagata taacacaaat atcaaaaatt ttttgcttca 3661 gtaataaagg tcatggtctg tacatggcat cacccaccga aatacaaaag tttacaatat 3721 cgtcagagtt ttgtcaattt attttagata tgatgggatc attgtacacg gttcaagaga 3781 tgcctgaaca gccaaaggag agtttcttta aaggattatt tggtggcggc gccaaaagtc 3841 tggacagaga agaactattt ggagaacaaa gcgggaaggc aaaccgttct gtagctaaac 3901 acattccggg cccaacactc gaacaattga atcagagagc ttcaacagcg gcatccgaaa 3961 tcagtcgcgc ccatctattg gcaatggaac gcggcgaaaa acttaatatg ctggaagagc 4021 gagccgaacg tatggccaat caagctcaag atttcagcgg cacagcgcat caattaatgc 4081 ttaaatacaa ggataaaaag tggtaccagt tgtaaaatat ctattacagg agccaattct 4141 accacagtta ttgtaatatt gcttttataa caacaacaac aaaaacaaca acaacaaaca 4201 ctttctacta cattaaagta cacttattta atttctgttt tcaaatcgtc atgttattta 4261 tatattaaaa aaaaaaacaa aaacaaaaaa ccaacaaaaa acaaagtaaa aatatattaa 4321 actacaacaa aatgttttta ataaaatata gaccaataaa acgtgttaca gatttacaa