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PREDICTED: Stomoxys calcitrans pH-sensitive chloride channel 2


LOCUS       XM_059368246            1635 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106084170), transcript variant X3, mRNA.
ACCESSION   XM_059368246
VERSION     XM_059368246.1
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1635
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1635
                     /gene="LOC106084170"
                     /note="pH-sensitive chloride channel 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:106084170"
     CDS             16..1503
                     /gene="LOC106084170"
                     /codon_start=1
                     /product="pH-sensitive chloride channel 2 isoform X3"
                     /protein_id="XP_059224229.1"
                     /db_xref="GeneID:106084170"
                     /translation="MVFIVILCLSLTNCADIECPSLVDADSLSQTQLLERLTHGCRYD
                     RLERPVTFSESGSRLPVDVYVRWYVYFMQNLEAHDLQFKIHALLQLRFLDPRLTFRKV
                     APKRKQPILGEKQLRDNLWVPHIFLANERDSSIMGTNEKDILTSISPDGTVIISSRIK
                     ATLYCWMNLQKFPFDEQHCSTYLESWMYNTSELVLHWEQKRPITFDPDLHLTEYILQE
                     AWSNESVINADLNDLRHGAFAGNYSSLDFTVGFSREVGFYLMDYFLPSMLIVGISWVS
                     FWLRADQAPPRIMLGTSTMLTFITLASAQGKTLPKVSYIKVSEVWFLGCTLFIFGSLL
                     EFAFVNTVIRRRRNVDVKSMSSKHILKSTIPPRISKRKIRSRSLSSATLGTDSISLTG
                     APTYNNYMTVHNFPINTIKETESDTDSISKVTSFTTTTNNQKVDMGLLERRGFNNCHG
                     DDDEDGWTTLTPEQLSQWIDVRARVLFPLTFLVFNAFFWTFVYIF"
     polyA_site      1635
                     /gene="LOC106084170"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agtggaatag acaaaatggt gtttatagtt attttatgtt tatcattaac gaattgtgct
       61 gatatcgaat gtccctcgct ggtggatgca gacagcctgt ctcaaactca actgcttgag
      121 agacttactc atggttgccg ctacgatcgt ttggagcgac cggttacttt ttccgaatcg
      181 ggcagtcgtc taccggtgga cgtttatgtg cgatggtatg tttacttcat gcagaatttg
      241 gaagctcatg atttgcagtt caaaatacat gctttgctac aattgcgctt tctggatccg
      301 cgtctgacgt ttcgtaaggt ggctcccaaa cgcaagcagc caatactggg tgagaaacaa
      361 ctgcgcgaca atttatgggt gcctcacatc tttctggcca atgaacgtga ttccagcatt
      421 atgggtacga atgaaaaaga tattctaacc tcaatttctc cagacggtac ggtaattatc
      481 tcgagccgca ttaaggcaac tttgtactgc tggatgaatt tgcaaaaatt ccccttcgat
      541 gagcagcatt gttcgacata tttggagagc tggatgtaca acacatctga attggttctg
      601 cactgggaac aaaagagacc aataacgttt gatccagatt tgcacttgac agagtatata
      661 cttcaagaag cctggagcaa tgagtcagtg atcaatgctg atttgaatga cctgcgccat
      721 ggggcatttg cgggtaatta tagttcactc gactttactg ttggattttc gcgtgaggtt
      781 ggattctatt tgatggacta ttttctgccc tcaatgttga ttgtgggcat atcgtgggtc
      841 tcattttggc taagggccga tcaagcgcct ccaaggatta tgttgggaac atcaacaatg
      901 ttaaccttta taacattggc ttcggctcaa ggaaaaactt tgcccaaagt aagctacatc
      961 aaagtgtcag aggtttggtt tttgggttgc acgttgttta tctttggcag tttacttgaa
     1021 tttgctttcg tgaacacggt aatacgccgc agacgcaatg tagacgtgaa atcaatgagc
     1081 agcaaacaca tattgaaatc cacaatccca cctcgtattt cgaaacgtaa aatacgatct
     1141 cgttcactct cgtcggctac actgggaaca gacagtattt ctcttacggg agcaccaacg
     1201 tacaacaact acatgacggt gcacaacttt cccataaata ctatcaaaga aactgagagt
     1261 gacaccgaca gcatttccaa agtgacatct ttcactacca ccaccaacaa tcaaaaggtg
     1321 gatatggggc tcttggagcg aaggggcttt aacaattgcc atggtgatga cgatgaagat
     1381 ggctggacca cacttactcc cgaacaatta tcgcagtgga ttgatgttcg agcccgtgtc
     1441 ctgtttccct taacctttct ggtgttcaac gctttcttct ggacatttgt gtatattttt
     1501 tagttcctct ctgtatttta ttcctgatat tacattcttt acattcctag tcttgttcaa
     1561 ttttgtaaac ttgcatgtgc ctccagcaat actattttat accataaaga tgtaaaaaca
     1621 ttttatttca ataaa