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LOCUS XM_059368243 3813 bp mRNA linear INV 02-SEP-2023 non-receptor type 9 (LOC106090166), transcript variant X5, mRNA. ACCESSION XM_059368243 VERSION XM_059368243.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3813 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3813 /gene="LOC106090166" /note="tyrosine-protein phosphatase non-receptor type 9; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106090166" CDS 483..2432 /gene="LOC106090166" /codon_start=1 /product="tyrosine-protein phosphatase non-receptor type 9 isoform X5" /protein_id="XP_059224226.1" /db_xref="GeneID:106090166" /translation="MSGSKYSNFDYDLSQKILTLLKGGYPARLKKVLIVTAPLWFKAP FKILRLFVREKLRERVFTVSVPTLSLHVPRRALPIHLGGTLEIEHNTWLLHCRKSMTN REDELLANIGGLSAATAATAAANQNSLSNQSHITNTVGVVANGDCQRFLAEPNENITN HSNNTSTTTAATASPTSLLNGHHNNSSSIAAAPLVPIANNLNNLNNSTSPNNAKLLAV GLANGGLVAGTIVNGDLVHTATSPSSSSASSTPLVVNGIVTGISALSGSATAGSGGGG GGVVVGQTTPTNNTSATNNTATAAGTTTTTGLSDFWTENPPSSASSGFSDDDSLAGQE GDPKTIEQIVQMVKTRGRQGLVKEYAEIRSRAPDGTFLHARMRNNVTKNRYTDVLCYD HSRVVLSRVGGDEVSDYINANFVDGYKQKNAYISTQGPLPKTSQDFWRMIWEQHCLVI VMTTRVMERGRVKCGQYWEPAENSSLEFGNFHVRTLSIETNEDYTVASLELRNTKTDE VRNVSHWQFTSWPDYGVPSSAMAMITFLQKVREKQAQMVQALGDTWAGHPRGPPIVVH CSAGIGRTGTFITLDICISRLEDVGTADIRGTVEKIRAQRAYSIQMPDQYVFCHLALI EYAISRGMLKAVDLEGFDDREDDSE" polyA_site 3813 /gene="LOC106090166" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 accagttacg agcacactat cgcaattatg tgcaagctca tgggctagct ttgggttatt 61 tttttgtgta cgtgcacctt gctgtgaaac aatttatcga actttgtaat aatattggct 121 caacatgcac acctagacgt aatatctcac agacaactgc tgtcaagttc ctttatgcac 181 gcaaatttga tgtcccccgg gctgtgtcac tgtatgaaca acatgaacag atacgtctca 241 aggaggggct ctataatatt gatccggatg ttgaaccatt acgttcagag ttgcaaacgg 301 gcaaattcac aatattgtct gcccgagatt ccagtggtgc tgccatagcc ctcttcaccg 361 ccaacaaaca cagtcccttg tgcgtcacac acacaacgac actgcaggga attgtgtatc 421 aactggattg cgctttacag gatacagaaa cacaaaaggc tggtctagtg tttatctacg 481 atatgagcgg ctcaaagtat tcaaatttcg attatgattt atctcagaaa attttgacat 541 tacttaaggg tggctatcca gcacgactga aaaaagtttt aattgttacg gcacccctgt 601 ggtttaaggc tcccttcaaa attttgcgcc tatttgtgcg agagaaattg cgcgaacgcg 661 ttttcactgt atcagtgcct acgctgagcc tacacgtgcc acgcagagca ttgcccatac 721 atctcggcgg tacactggaa attgagcata acacatggtt gctgcattgc cgcaaatcga 781 tgacgaatcg tgaagacgag ttgctcgcca acattggtgg tttgtcagcg gcaacagcgg 841 cgacagcggc agcaaatcaa aacagtttga gcaaccaatc acacatcaca aacaccgtcg 901 gagtggtggc aaacggcgat tgtcaacgtt ttctggcgga acccaacgaa aatatcacaa 961 accacagcaa caacacatca acaacaactg cagcaacagc atcaccaaca tcactgttaa 1021 acggacatca taataattct agtagcatcg cagccgcgcc attagtgcca attgccaaca 1081 atttaaataa tctaaacaac agtacgtcac ccaataacgc caaattgttg gcggtgggtc 1141 tagctaacgg cggccttgtc gccggcacca ttgtcaacgg tgatctagtg catacggcaa 1201 cgtcgccgtc gtcctcctcc gcttcctcca cgcccttggt ggtgaacggc atcgttacgg 1261 gtatcagcgc cttaagtggt agtgccactg ctggttccgg tggtggtggc ggcggtgttg 1321 ttgttggcca aacaacaccg acaaacaaca catcagcgac aaataacaca gcaacagcag 1381 caggaacaac aacaacaacg ggtctcagtg atttctggac agagaaccca ccaagtagtg 1441 cctcgtcggg attcagtgat gacgacagtc tggctggcca agagggtgat ccgaaaacaa 1501 ttgaacaaat tgttcaaatg gtaaagacac gggggcgtca gggtctggtg aaagaatatg 1561 ccgaaatccg cagtcgagcc ccggatggca cgtttctaca tgccagaatg cgcaataacg 1621 tgaccaaaaa tcgctacaca gatgttcttt gttatgacca cagtcgagtt gttctatccc 1681 gagtcggtgg tgatgaggta tcggattata taaatgccaa ttttgtagat ggttacaaac 1741 agaaaaatgc atacatttca actcaaggcc cattaccaaa gacatcccaa gatttctggc 1801 gcatgatctg ggagcaacat tgtttagtta tagttatgac aacacgtgtt atggaacgtg 1861 gacgcgttaa atgcggtcaa tattgggaac cagccgaaaa tagttcctta gaatttggaa 1921 atttccatgt gcgaacactt agtatagaaa ctaatgaaga ttatacagta gcctcattag 1981 aattgagaaa tacaaagact gatgaagtaa gaaatgtatc acattggcaa tttaccagct 2041 ggcccgatta tggtgtgcct agttctgcta tggccatgat aacattttta caaaaagtac 2101 gcgagaaaca ggctcaaatg gtacaggcgc tgggtgatac atgggctgga catcctagag 2161 gacccccaat tgttgtacat tgcagtgcgg gtataggaag aacaggtaca tttataactt 2221 tggacatttg catatctcgt ctcgaggatg ttggtacggc cgatatacgt ggaactgtgg 2281 aaaagatacg tgctcaacgt gcatattcaa tacaaatgcc cgatcaatat gtattttgtc 2341 atttagcgtt aattgaatat gcgatctcaa ggggaatgtt aaaggctgtc gatctggagg 2401 gtttcgatga cagagaagat gattccgaat aaaatgggaa atagtaacaa caaaaacaac 2461 caactaacaa caataattac aacaaccaac aaatatataa tttgttttta attcaaagaa 2521 ggccaacact accaactaca ccaccaaaat cctgtcaaca aaacaaacgg aaaccataaa 2581 atgaaatcca caacaatttt aaacaaaaaa agagtgtttt tctctttttt caatacctaa 2641 aacaaagaaa cacaggaaga cagatcaacc tacctaaaag atatgatatt tgtaaaactg 2701 tgaaatagtt tcattcagtt tcatctttag gtaatacaaa aaaaaaacaa ccacaagccc 2761 cctactacta agtttgttat tatggtattt tgtttttctc aatacaaaat catttttttt 2821 atagtaaaaa acaaagaaaa acctggaaaa ccaactccct actacttcta ccactacaca 2881 cccacacaca cacacacact acgaaatagt ttacaatcaa ttaatttttt gttatttatt 2941 aaaaaaaaaa gaaaaaataa atatatgtat gtattattgt aatgtaaaca cagaaataaa 3001 aaaagtctaa acaaaaataa tccatagcta ttagttttgg gccccattat aaaggacgat 3061 tcgttcatcc caacaagaag ttttgaaagc gtagtaacaa accatatttt tttttacttt 3121 cgatgacaga tagaaggaca ctattgagaa tagccgccat caattaataa taaggcatat 3181 ataagttata caatcaaaca aacaacaaca actacaacaa caagaacctt aatctgtttt 3241 cacatgtttt tatgtaattt gtggataata atttatatat gtaaagaaaa caaaaaaaca 3301 aacaaaacaa aggacaattt ttataaaaca aaaacagcaa acagccaagc cgattagaag 3361 aaaacccata tttgcgtagt ttttagatca gtgatttgta gatgaaacaa gagaaccaac 3421 attaacagta acaaccaacg tagattctta tgttaatttt tttaatttaa tttttttttt 3481 taatcattaa tgtttttttc tgtttaacta ttgctattat tacaaattac aaaaaaaaaa 3541 atatatatat atatattatt taaatcgtaa tggaaaaaac cccaataccc atacttgttg 3601 tcattaaaac catcaaatgt gtggcaaaac aaaaacaaaa aaaaaacaac tggaaaagag 3661 aatgaatgcg gttaaacaag cgatgatgaa gagtatgaat gttaattata acgctaaatt 3721 taaattaaaa taatgataat attatctata tatatatata taaatatatt atacataact 3781 taatataaac gaaataaaat aaatttaatt ata