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LOCUS XM_059368242 3824 bp mRNA linear INV 02-SEP-2023 non-receptor type 9 (LOC106090166), transcript variant X4, mRNA. ACCESSION XM_059368242 VERSION XM_059368242.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3824 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3824 /gene="LOC106090166" /note="tyrosine-protein phosphatase non-receptor type 9; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106090166" CDS 56..2443 /gene="LOC106090166" /codon_start=1 /product="tyrosine-protein phosphatase non-receptor type 9 isoform X4" /protein_id="XP_059224225.1" /db_xref="GeneID:106090166" /translation="MASEVASDEIQFAVKQFIELCNNIGSTCTPRRNISQTTAVKFLY ARKFDVPRAVSLYEQHEQIRLKEGLYNIDPDVEPLRSELQTGKFTILSARDSSGAAIA LFTANKHSPLCVTHTTTLQGIVYQLDCALQDTETQKAGLVFIYDMSGSKYSNFDYDLS QKILTLLKGGYPARLKKVLIVTAPLWFKAPFKILRLFVREKLRERVFTVSVPTLSLHV PRRALPIHLGGTLEIEHNTWLLHCRKSMTNREDELLANIGGLSAATAATAAANQNSLS NQSHITNTVGVVANGDCQRFLAEPNENITNHSNNTSTTTAATASPTSLLNGHHNNSSS IAAAPLVPIANNLNNLNNSTSPNNAKLLAVGLANGGLVAGTIVNGDLVHTATSPSSSS ASSTPLVVNGIVTGISALSGSATAGSGGGGGGVVVGQTTPTNNTSATNNTATAAGTTT TTGLSDFWTENPPSSASSGFSDDDSLAGQEGDPKTIEQIVQMVKTRGRQGLVKEYAEI RSRAPDGTFLHARMRNNVTKNRYTDVLCYDHSRVVLSRVGGDEVSDYINANFVDGYKQ KNAYISTQGPLPKTSQDFWRMIWEQHCLVIVMTTRVMERGRVKCGQYWEPAENSSLEF GNFHVRTLSIETNEDYTVASLELRNTKTDEVRNVSHWQFTSWPDYGVPSSAMAMITFL QKVREKQAQMVQALGDTWAGHPRGPPIVVHCSAGIGRTGTFITLDICISRLEDVGTAD IRGTVEKIRAQRAYSIQMPDQYVFCHLALIEYAISRGMLKAVDLEGFDDREDDSE" polyA_site 3824 /gene="LOC106090166" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgaccaagca aacaagcagt agtaagaatc agcagagtaa aaatacacgt tcaaaatggc 61 gtcggaagtt gcatcggatg aaattcaatt tgctgtgaaa caatttatcg aactttgtaa 121 taatattggc tcaacatgca cacctagacg taatatctca cagacaactg ctgtcaagtt 181 cctttatgca cgcaaatttg atgtcccccg ggctgtgtca ctgtatgaac aacatgaaca 241 gatacgtctc aaggaggggc tctataatat tgatccggat gttgaaccat tacgttcaga 301 gttgcaaacg ggcaaattca caatattgtc tgcccgagat tccagtggtg ctgccatagc 361 cctcttcacc gccaacaaac acagtccctt gtgcgtcaca cacacaacga cactgcaggg 421 aattgtgtat caactggatt gcgctttaca ggatacagaa acacaaaagg ctggtctagt 481 gtttatctac gatatgagcg gctcaaagta ttcaaatttc gattatgatt tatctcagaa 541 aattttgaca ttacttaagg gtggctatcc agcacgactg aaaaaagttt taattgttac 601 ggcacccctg tggtttaagg ctcccttcaa aattttgcgc ctatttgtgc gagagaaatt 661 gcgcgaacgc gttttcactg tatcagtgcc tacgctgagc ctacacgtgc cacgcagagc 721 attgcccata catctcggcg gtacactgga aattgagcat aacacatggt tgctgcattg 781 ccgcaaatcg atgacgaatc gtgaagacga gttgctcgcc aacattggtg gtttgtcagc 841 ggcaacagcg gcgacagcgg cagcaaatca aaacagtttg agcaaccaat cacacatcac 901 aaacaccgtc ggagtggtgg caaacggcga ttgtcaacgt tttctggcgg aacccaacga 961 aaatatcaca aaccacagca acaacacatc aacaacaact gcagcaacag catcaccaac 1021 atcactgtta aacggacatc ataataattc tagtagcatc gcagccgcgc cattagtgcc 1081 aattgccaac aatttaaata atctaaacaa cagtacgtca cccaataacg ccaaattgtt 1141 ggcggtgggt ctagctaacg gcggccttgt cgccggcacc attgtcaacg gtgatctagt 1201 gcatacggca acgtcgccgt cgtcctcctc cgcttcctcc acgcccttgg tggtgaacgg 1261 catcgttacg ggtatcagcg ccttaagtgg tagtgccact gctggttccg gtggtggtgg 1321 cggcggtgtt gttgttggcc aaacaacacc gacaaacaac acatcagcga caaataacac 1381 agcaacagca gcaggaacaa caacaacaac gggtctcagt gatttctgga cagagaaccc 1441 accaagtagt gcctcgtcgg gattcagtga tgacgacagt ctggctggcc aagagggtga 1501 tccgaaaaca attgaacaaa ttgttcaaat ggtaaagaca cgggggcgtc agggtctggt 1561 gaaagaatat gccgaaatcc gcagtcgagc cccggatggc acgtttctac atgccagaat 1621 gcgcaataac gtgaccaaaa atcgctacac agatgttctt tgttatgacc acagtcgagt 1681 tgttctatcc cgagtcggtg gtgatgaggt atcggattat ataaatgcca attttgtaga 1741 tggttacaaa cagaaaaatg catacatttc aactcaaggc ccattaccaa agacatccca 1801 agatttctgg cgcatgatct gggagcaaca ttgtttagtt atagttatga caacacgtgt 1861 tatggaacgt ggacgcgtta aatgcggtca atattgggaa ccagccgaaa atagttcctt 1921 agaatttgga aatttccatg tgcgaacact tagtatagaa actaatgaag attatacagt 1981 agcctcatta gaattgagaa atacaaagac tgatgaagta agaaatgtat cacattggca 2041 atttaccagc tggcccgatt atggtgtgcc tagttctgct atggccatga taacattttt 2101 acaaaaagta cgcgagaaac aggctcaaat ggtacaggcg ctgggtgata catgggctgg 2161 acatcctaga ggacccccaa ttgttgtaca ttgcagtgcg ggtataggaa gaacaggtac 2221 atttataact ttggacattt gcatatctcg tctcgaggat gttggtacgg ccgatatacg 2281 tggaactgtg gaaaagatac gtgctcaacg tgcatattca atacaaatgc ccgatcaata 2341 tgtattttgt catttagcgt taattgaata tgcgatctca aggggaatgt taaaggctgt 2401 cgatctggag ggtttcgatg acagagaaga tgattccgaa taaaatggga aatagtaaca 2461 acaaaaacaa ccaactaaca acaataatta caacaaccaa caaatatata atttgttttt 2521 aattcaaaga aggccaacac taccaactac accaccaaaa tcctgtcaac aaaacaaacg 2581 gaaaccataa aatgaaatcc acaacaattt taaacaaaaa aagagtgttt ttctcttttt 2641 tcaataccta aaacaaagaa acacaggaag acagatcaac ctacctaaaa gatatgatat 2701 ttgtaaaact gtgaaatagt ttcattcagt ttcatcttta ggtaatacaa aaaaaaaaca 2761 accacaagcc ccctactact aagtttgtta ttatggtatt ttgtttttct caatacaaaa 2821 tcattttttt tatagtaaaa aacaaagaaa aacctggaaa accaactccc tactacttct 2881 accactacac acccacacac acacacacac tacgaaatag tttacaatca attaattttt 2941 tgttatttat taaaaaaaaa agaaaaaata aatatatgta tgtattattg taatgtaaac 3001 acagaaataa aaaaagtcta aacaaaaata atccatagct attagttttg ggccccatta 3061 taaaggacga ttcgttcatc ccaacaagaa gttttgaaag cgtagtaaca aaccatattt 3121 ttttttactt tcgatgacag atagaaggac actattgaga atagccgcca tcaattaata 3181 ataaggcata tataagttat acaatcaaac aaacaacaac aactacaaca acaagaacct 3241 taatctgttt tcacatgttt ttatgtaatt tgtggataat aatttatata tgtaaagaaa 3301 acaaaaaaac aaacaaaaca aaggacaatt tttataaaac aaaaacagca aacagccaag 3361 ccgattagaa gaaaacccat atttgcgtag tttttagatc agtgatttgt agatgaaaca 3421 agagaaccaa cattaacagt aacaaccaac gtagattctt atgttaattt ttttaattta 3481 attttttttt ttaatcatta atgttttttt ctgtttaact attgctatta ttacaaatta 3541 caaaaaaaaa aatatatata tatatattat ttaaatcgta atggaaaaaa ccccaatacc 3601 catacttgtt gtcattaaaa ccatcaaatg tgtggcaaaa caaaaacaaa aaaaaaacaa 3661 ctggaaaaga gaatgaatgc ggttaaacaa gcgatgatga agagtatgaa tgttaattat 3721 aacgctaaat ttaaattaaa ataatgataa tattatctat atatatatat ataaatatat 3781 tatacataac ttaatataaa cgaaataaaa taaatttaat tata