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LOCUS XM_059368241 3840 bp mRNA linear INV 02-SEP-2023 non-receptor type 9 (LOC106090166), transcript variant X3, mRNA. ACCESSION XM_059368241 VERSION XM_059368241.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3840 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3840 /gene="LOC106090166" /note="tyrosine-protein phosphatase non-receptor type 9; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106090166" CDS 60..2459 /gene="LOC106090166" /codon_start=1 /product="tyrosine-protein phosphatase non-receptor type 9 isoform X3" /protein_id="XP_059224224.1" /db_xref="GeneID:106090166" /translation="MVQLILCNSSLEQYKQAVKQFIELCNNIGSTCTPRRNISQTTAV KFLYARKFDVPRAVSLYEQHEQIRLKEGLYNIDPDVEPLRSELQTGKFTILSARDSSG AAIALFTANKHSPLCVTHTTTLQGIVYQLDCALQDTETQKAGLVFIYDMSGSKYSNFD YDLSQKILTLLKGGYPARLKKVLIVTAPLWFKAPFKILRLFVREKLRERVFTVSVPTL SLHVPRRALPIHLGGTLEIEHNTWLLHCRKSMTNREDELLANIGGLSAATAATAAANQ NSLSNQSHITNTVGVVANGDCQRFLAEPNENITNHSNNTSTTTAATASPTSLLNGHHN NSSSIAAAPLVPIANNLNNLNNSTSPNNAKLLAVGLANGGLVAGTIVNGDLVHTATSP SSSSASSTPLVVNGIVTGISALSGSATAGSGGGGGGVVVGQTTPTNNTSATNNTATAA GTTTTTGLSDFWTENPPSSASSGFSDDDSLAGQEGDPKTIEQIVQMVKTRGRQGLVKE YAEIRSRAPDGTFLHARMRNNVTKNRYTDVLCYDHSRVVLSRVGGDEVSDYINANFVD GYKQKNAYISTQGPLPKTSQDFWRMIWEQHCLVIVMTTRVMERGRVKCGQYWEPAENS SLEFGNFHVRTLSIETNEDYTVASLELRNTKTDEVRNVSHWQFTSWPDYGVPSSAMAM ITFLQKVREKQAQMVQALGDTWAGHPRGPPIVVHCSAGIGRTGTFITLDICISRLEDV GTADIRGTVEKIRAQRAYSIQMPDQYVFCHLALIEYAISRGMLKAVDLEGFDDREDDS E" polyA_site 3840 /gene="LOC106090166" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agcaaccaaa tttgtatacg ataaaagtgc agtgaacctt tcgtcagagt agaagcaaaa 61 tggtgcaatt gattttatgt aattcaagcc tcgagcaata taagcaggct gtgaaacaat 121 ttatcgaact ttgtaataat attggctcaa catgcacacc tagacgtaat atctcacaga 181 caactgctgt caagttcctt tatgcacgca aatttgatgt cccccgggct gtgtcactgt 241 atgaacaaca tgaacagata cgtctcaagg aggggctcta taatattgat ccggatgttg 301 aaccattacg ttcagagttg caaacgggca aattcacaat attgtctgcc cgagattcca 361 gtggtgctgc catagccctc ttcaccgcca acaaacacag tcccttgtgc gtcacacaca 421 caacgacact gcagggaatt gtgtatcaac tggattgcgc tttacaggat acagaaacac 481 aaaaggctgg tctagtgttt atctacgata tgagcggctc aaagtattca aatttcgatt 541 atgatttatc tcagaaaatt ttgacattac ttaagggtgg ctatccagca cgactgaaaa 601 aagttttaat tgttacggca cccctgtggt ttaaggctcc cttcaaaatt ttgcgcctat 661 ttgtgcgaga gaaattgcgc gaacgcgttt tcactgtatc agtgcctacg ctgagcctac 721 acgtgccacg cagagcattg cccatacatc tcggcggtac actggaaatt gagcataaca 781 catggttgct gcattgccgc aaatcgatga cgaatcgtga agacgagttg ctcgccaaca 841 ttggtggttt gtcagcggca acagcggcga cagcggcagc aaatcaaaac agtttgagca 901 accaatcaca catcacaaac accgtcggag tggtggcaaa cggcgattgt caacgttttc 961 tggcggaacc caacgaaaat atcacaaacc acagcaacaa cacatcaaca acaactgcag 1021 caacagcatc accaacatca ctgttaaacg gacatcataa taattctagt agcatcgcag 1081 ccgcgccatt agtgccaatt gccaacaatt taaataatct aaacaacagt acgtcaccca 1141 ataacgccaa attgttggcg gtgggtctag ctaacggcgg ccttgtcgcc ggcaccattg 1201 tcaacggtga tctagtgcat acggcaacgt cgccgtcgtc ctcctccgct tcctccacgc 1261 ccttggtggt gaacggcatc gttacgggta tcagcgcctt aagtggtagt gccactgctg 1321 gttccggtgg tggtggcggc ggtgttgttg ttggccaaac aacaccgaca aacaacacat 1381 cagcgacaaa taacacagca acagcagcag gaacaacaac aacaacgggt ctcagtgatt 1441 tctggacaga gaacccacca agtagtgcct cgtcgggatt cagtgatgac gacagtctgg 1501 ctggccaaga gggtgatccg aaaacaattg aacaaattgt tcaaatggta aagacacggg 1561 ggcgtcaggg tctggtgaaa gaatatgccg aaatccgcag tcgagccccg gatggcacgt 1621 ttctacatgc cagaatgcgc aataacgtga ccaaaaatcg ctacacagat gttctttgtt 1681 atgaccacag tcgagttgtt ctatcccgag tcggtggtga tgaggtatcg gattatataa 1741 atgccaattt tgtagatggt tacaaacaga aaaatgcata catttcaact caaggcccat 1801 taccaaagac atcccaagat ttctggcgca tgatctggga gcaacattgt ttagttatag 1861 ttatgacaac acgtgttatg gaacgtggac gcgttaaatg cggtcaatat tgggaaccag 1921 ccgaaaatag ttccttagaa tttggaaatt tccatgtgcg aacacttagt atagaaacta 1981 atgaagatta tacagtagcc tcattagaat tgagaaatac aaagactgat gaagtaagaa 2041 atgtatcaca ttggcaattt accagctggc ccgattatgg tgtgcctagt tctgctatgg 2101 ccatgataac atttttacaa aaagtacgcg agaaacaggc tcaaatggta caggcgctgg 2161 gtgatacatg ggctggacat cctagaggac ccccaattgt tgtacattgc agtgcgggta 2221 taggaagaac aggtacattt ataactttgg acatttgcat atctcgtctc gaggatgttg 2281 gtacggccga tatacgtgga actgtggaaa agatacgtgc tcaacgtgca tattcaatac 2341 aaatgcccga tcaatatgta ttttgtcatt tagcgttaat tgaatatgcg atctcaaggg 2401 gaatgttaaa ggctgtcgat ctggagggtt tcgatgacag agaagatgat tccgaataaa 2461 atgggaaata gtaacaacaa aaacaaccaa ctaacaacaa taattacaac aaccaacaaa 2521 tatataattt gtttttaatt caaagaaggc caacactacc aactacacca ccaaaatcct 2581 gtcaacaaaa caaacggaaa ccataaaatg aaatccacaa caattttaaa caaaaaaaga 2641 gtgtttttct cttttttcaa tacctaaaac aaagaaacac aggaagacag atcaacctac 2701 ctaaaagata tgatatttgt aaaactgtga aatagtttca ttcagtttca tctttaggta 2761 atacaaaaaa aaaacaacca caagccccct actactaagt ttgttattat ggtattttgt 2821 ttttctcaat acaaaatcat tttttttata gtaaaaaaca aagaaaaacc tggaaaacca 2881 actccctact acttctacca ctacacaccc acacacacac acacactacg aaatagttta 2941 caatcaatta attttttgtt atttattaaa aaaaaaagaa aaaataaata tatgtatgta 3001 ttattgtaat gtaaacacag aaataaaaaa agtctaaaca aaaataatcc atagctatta 3061 gttttgggcc ccattataaa ggacgattcg ttcatcccaa caagaagttt tgaaagcgta 3121 gtaacaaacc atattttttt ttactttcga tgacagatag aaggacacta ttgagaatag 3181 ccgccatcaa ttaataataa ggcatatata agttatacaa tcaaacaaac aacaacaact 3241 acaacaacaa gaaccttaat ctgttttcac atgtttttat gtaatttgtg gataataatt 3301 tatatatgta aagaaaacaa aaaaacaaac aaaacaaagg acaattttta taaaacaaaa 3361 acagcaaaca gccaagccga ttagaagaaa acccatattt gcgtagtttt tagatcagtg 3421 atttgtagat gaaacaagag aaccaacatt aacagtaaca accaacgtag attcttatgt 3481 taattttttt aatttaattt ttttttttaa tcattaatgt ttttttctgt ttaactattg 3541 ctattattac aaattacaaa aaaaaaaata tatatatata tattatttaa atcgtaatgg 3601 aaaaaacccc aatacccata cttgttgtca ttaaaaccat caaatgtgtg gcaaaacaaa 3661 aacaaaaaaa aaacaactgg aaaagagaat gaatgcggtt aaacaagcga tgatgaagag 3721 tatgaatgtt aattataacg ctaaatttaa attaaaataa tgataatatt atctatatat 3781 atatatataa atatattata cataacttaa tataaacgaa ataaaataaa tttaattata