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LOCUS XM_059368240 3818 bp mRNA linear INV 02-SEP-2023 non-receptor type 9 (LOC106090166), transcript variant X2, mRNA. ACCESSION XM_059368240 VERSION XM_059368240.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3818 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3818 /gene="LOC106090166" /note="tyrosine-protein phosphatase non-receptor type 9; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106090166" CDS 29..2437 /gene="LOC106090166" /codon_start=1 /product="tyrosine-protein phosphatase non-receptor type 9 isoform X2" /protein_id="XP_059224223.1" /db_xref="GeneID:106090166" /translation="MIDDAKYNCHRKVFLCIIKAVKQFIELCNNIGSTCTPRRNISQT TAVKFLYARKFDVPRAVSLYEQHEQIRLKEGLYNIDPDVEPLRSELQTGKFTILSARD SSGAAIALFTANKHSPLCVTHTTTLQGIVYQLDCALQDTETQKAGLVFIYDMSGSKYS NFDYDLSQKILTLLKGGYPARLKKVLIVTAPLWFKAPFKILRLFVREKLRERVFTVSV PTLSLHVPRRALPIHLGGTLEIEHNTWLLHCRKSMTNREDELLANIGGLSAATAATAA ANQNSLSNQSHITNTVGVVANGDCQRFLAEPNENITNHSNNTSTTTAATASPTSLLNG HHNNSSSIAAAPLVPIANNLNNLNNSTSPNNAKLLAVGLANGGLVAGTIVNGDLVHTA TSPSSSSASSTPLVVNGIVTGISALSGSATAGSGGGGGGVVVGQTTPTNNTSATNNTA TAAGTTTTTGLSDFWTENPPSSASSGFSDDDSLAGQEGDPKTIEQIVQMVKTRGRQGL VKEYAEIRSRAPDGTFLHARMRNNVTKNRYTDVLCYDHSRVVLSRVGGDEVSDYINAN FVDGYKQKNAYISTQGPLPKTSQDFWRMIWEQHCLVIVMTTRVMERGRVKCGQYWEPA ENSSLEFGNFHVRTLSIETNEDYTVASLELRNTKTDEVRNVSHWQFTSWPDYGVPSSA MAMITFLQKVREKQAQMVQALGDTWAGHPRGPPIVVHCSAGIGRTGTFITLDICISRL EDVGTADIRGTVEKIRAQRAYSIQMPDQYVFCHLALIEYAISRGMLKAVDLEGFDDRE DDSE" polyA_site 3818 /gene="LOC106090166" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctctctgtgg caatcatatt acgataaaat gattgatgat gccaagtata attgccaccg 61 caaggtattt ctttgcatta tcaaggctgt gaaacaattt atcgaacttt gtaataatat 121 tggctcaaca tgcacaccta gacgtaatat ctcacagaca actgctgtca agttccttta 181 tgcacgcaaa tttgatgtcc cccgggctgt gtcactgtat gaacaacatg aacagatacg 241 tctcaaggag gggctctata atattgatcc ggatgttgaa ccattacgtt cagagttgca 301 aacgggcaaa ttcacaatat tgtctgcccg agattccagt ggtgctgcca tagccctctt 361 caccgccaac aaacacagtc ccttgtgcgt cacacacaca acgacactgc agggaattgt 421 gtatcaactg gattgcgctt tacaggatac agaaacacaa aaggctggtc tagtgtttat 481 ctacgatatg agcggctcaa agtattcaaa tttcgattat gatttatctc agaaaatttt 541 gacattactt aagggtggct atccagcacg actgaaaaaa gttttaattg ttacggcacc 601 cctgtggttt aaggctccct tcaaaatttt gcgcctattt gtgcgagaga aattgcgcga 661 acgcgttttc actgtatcag tgcctacgct gagcctacac gtgccacgca gagcattgcc 721 catacatctc ggcggtacac tggaaattga gcataacaca tggttgctgc attgccgcaa 781 atcgatgacg aatcgtgaag acgagttgct cgccaacatt ggtggtttgt cagcggcaac 841 agcggcgaca gcggcagcaa atcaaaacag tttgagcaac caatcacaca tcacaaacac 901 cgtcggagtg gtggcaaacg gcgattgtca acgttttctg gcggaaccca acgaaaatat 961 cacaaaccac agcaacaaca catcaacaac aactgcagca acagcatcac caacatcact 1021 gttaaacgga catcataata attctagtag catcgcagcc gcgccattag tgccaattgc 1081 caacaattta aataatctaa acaacagtac gtcacccaat aacgccaaat tgttggcggt 1141 gggtctagct aacggcggcc ttgtcgccgg caccattgtc aacggtgatc tagtgcatac 1201 ggcaacgtcg ccgtcgtcct cctccgcttc ctccacgccc ttggtggtga acggcatcgt 1261 tacgggtatc agcgccttaa gtggtagtgc cactgctggt tccggtggtg gtggcggcgg 1321 tgttgttgtt ggccaaacaa caccgacaaa caacacatca gcgacaaata acacagcaac 1381 agcagcagga acaacaacaa caacgggtct cagtgatttc tggacagaga acccaccaag 1441 tagtgcctcg tcgggattca gtgatgacga cagtctggct ggccaagagg gtgatccgaa 1501 aacaattgaa caaattgttc aaatggtaaa gacacggggg cgtcagggtc tggtgaaaga 1561 atatgccgaa atccgcagtc gagccccgga tggcacgttt ctacatgcca gaatgcgcaa 1621 taacgtgacc aaaaatcgct acacagatgt tctttgttat gaccacagtc gagttgttct 1681 atcccgagtc ggtggtgatg aggtatcgga ttatataaat gccaattttg tagatggtta 1741 caaacagaaa aatgcataca tttcaactca aggcccatta ccaaagacat cccaagattt 1801 ctggcgcatg atctgggagc aacattgttt agttatagtt atgacaacac gtgttatgga 1861 acgtggacgc gttaaatgcg gtcaatattg ggaaccagcc gaaaatagtt ccttagaatt 1921 tggaaatttc catgtgcgaa cacttagtat agaaactaat gaagattata cagtagcctc 1981 attagaattg agaaatacaa agactgatga agtaagaaat gtatcacatt ggcaatttac 2041 cagctggccc gattatggtg tgcctagttc tgctatggcc atgataacat ttttacaaaa 2101 agtacgcgag aaacaggctc aaatggtaca ggcgctgggt gatacatggg ctggacatcc 2161 tagaggaccc ccaattgttg tacattgcag tgcgggtata ggaagaacag gtacatttat 2221 aactttggac atttgcatat ctcgtctcga ggatgttggt acggccgata tacgtggaac 2281 tgtggaaaag atacgtgctc aacgtgcata ttcaatacaa atgcccgatc aatatgtatt 2341 ttgtcattta gcgttaattg aatatgcgat ctcaagggga atgttaaagg ctgtcgatct 2401 ggagggtttc gatgacagag aagatgattc cgaataaaat gggaaatagt aacaacaaaa 2461 acaaccaact aacaacaata attacaacaa ccaacaaata tataatttgt ttttaattca 2521 aagaaggcca acactaccaa ctacaccacc aaaatcctgt caacaaaaca aacggaaacc 2581 ataaaatgaa atccacaaca attttaaaca aaaaaagagt gtttttctct tttttcaata 2641 cctaaaacaa agaaacacag gaagacagat caacctacct aaaagatatg atatttgtaa 2701 aactgtgaaa tagtttcatt cagtttcatc tttaggtaat acaaaaaaaa aacaaccaca 2761 agccccctac tactaagttt gttattatgg tattttgttt ttctcaatac aaaatcattt 2821 tttttatagt aaaaaacaaa gaaaaacctg gaaaaccaac tccctactac ttctaccact 2881 acacacccac acacacacac acactacgaa atagtttaca atcaattaat tttttgttat 2941 ttattaaaaa aaaaagaaaa aataaatata tgtatgtatt attgtaatgt aaacacagaa 3001 ataaaaaaag tctaaacaaa aataatccat agctattagt tttgggcccc attataaagg 3061 acgattcgtt catcccaaca agaagttttg aaagcgtagt aacaaaccat attttttttt 3121 actttcgatg acagatagaa ggacactatt gagaatagcc gccatcaatt aataataagg 3181 catatataag ttatacaatc aaacaaacaa caacaactac aacaacaaga accttaatct 3241 gttttcacat gtttttatgt aatttgtgga taataattta tatatgtaaa gaaaacaaaa 3301 aaacaaacaa aacaaaggac aatttttata aaacaaaaac agcaaacagc caagccgatt 3361 agaagaaaac ccatatttgc gtagttttta gatcagtgat ttgtagatga aacaagagaa 3421 ccaacattaa cagtaacaac caacgtagat tcttatgtta atttttttaa tttaattttt 3481 ttttttaatc attaatgttt ttttctgttt aactattgct attattacaa attacaaaaa 3541 aaaaaatata tatatatata ttatttaaat cgtaatggaa aaaaccccaa tacccatact 3601 tgttgtcatt aaaaccatca aatgtgtggc aaaacaaaaa caaaaaaaaa acaactggaa 3661 aagagaatga atgcggttaa acaagcgatg atgaagagta tgaatgttaa ttataacgct 3721 aaatttaaat taaaataatg ataatattat ctatatatat atatataaat atattataca 3781 taacttaata taaacgaaat aaaataaatt taattata