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LOCUS XM_059368239 3962 bp mRNA linear INV 02-SEP-2023 non-receptor type 9 (LOC106090166), transcript variant X1, mRNA. ACCESSION XM_059368239 VERSION XM_059368239.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3962 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3962 /gene="LOC106090166" /note="tyrosine-protein phosphatase non-receptor type 9; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:106090166" CDS 26..2581 /gene="LOC106090166" /codon_start=1 /product="tyrosine-protein phosphatase non-receptor type 9 isoform X1" /protein_id="XP_059224222.1" /db_xref="GeneID:106090166" /translation="MTKQTSSSKNQQSKNTRSKWRRKLHRMKFNLETFSKHAIVTIDD EQHFSVKCYGYYGAFCEKKNVLRKAVKQFIELCNNIGSTCTPRRNISQTTAVKFLYAR KFDVPRAVSLYEQHEQIRLKEGLYNIDPDVEPLRSELQTGKFTILSARDSSGAAIALF TANKHSPLCVTHTTTLQGIVYQLDCALQDTETQKAGLVFIYDMSGSKYSNFDYDLSQK ILTLLKGGYPARLKKVLIVTAPLWFKAPFKILRLFVREKLRERVFTVSVPTLSLHVPR RALPIHLGGTLEIEHNTWLLHCRKSMTNREDELLANIGGLSAATAATAAANQNSLSNQ SHITNTVGVVANGDCQRFLAEPNENITNHSNNTSTTTAATASPTSLLNGHHNNSSSIA AAPLVPIANNLNNLNNSTSPNNAKLLAVGLANGGLVAGTIVNGDLVHTATSPSSSSAS STPLVVNGIVTGISALSGSATAGSGGGGGGVVVGQTTPTNNTSATNNTATAAGTTTTT GLSDFWTENPPSSASSGFSDDDSLAGQEGDPKTIEQIVQMVKTRGRQGLVKEYAEIRS RAPDGTFLHARMRNNVTKNRYTDVLCYDHSRVVLSRVGGDEVSDYINANFVDGYKQKN AYISTQGPLPKTSQDFWRMIWEQHCLVIVMTTRVMERGRVKCGQYWEPAENSSLEFGN FHVRTLSIETNEDYTVASLELRNTKTDEVRNVSHWQFTSWPDYGVPSSAMAMITFLQK VREKQAQMVQALGDTWAGHPRGPPIVVHCSAGIGRTGTFITLDICISRLEDVGTADIR GTVEKIRAQRAYSIQMPDQYVFCHLALIEYAISRGMLKAVDLEGFDDREDDSE" polyA_site 3962 /gene="LOC106090166" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 acaaaaatga agataaacac gagagatgac caagcaaaca agcagtagta agaatcagca 61 gagtaaaaat acacgttcaa aatggcgtcg gaagttgcat cggatgaaat tcaatttaga 121 aaccttctca aaacatgcca tagttacgat tgatgatgaa cagcactttt ctgttaagtg 181 ctatggctat tatggggcat tttgcgaaaa aaaaaacgta cttagaaaag ctgtgaaaca 241 atttatcgaa ctttgtaata atattggctc aacatgcaca cctagacgta atatctcaca 301 gacaactgct gtcaagttcc tttatgcacg caaatttgat gtcccccggg ctgtgtcact 361 gtatgaacaa catgaacaga tacgtctcaa ggaggggctc tataatattg atccggatgt 421 tgaaccatta cgttcagagt tgcaaacggg caaattcaca atattgtctg cccgagattc 481 cagtggtgct gccatagccc tcttcaccgc caacaaacac agtcccttgt gcgtcacaca 541 cacaacgaca ctgcagggaa ttgtgtatca actggattgc gctttacagg atacagaaac 601 acaaaaggct ggtctagtgt ttatctacga tatgagcggc tcaaagtatt caaatttcga 661 ttatgattta tctcagaaaa ttttgacatt acttaagggt ggctatccag cacgactgaa 721 aaaagtttta attgttacgg cacccctgtg gtttaaggct cccttcaaaa ttttgcgcct 781 atttgtgcga gagaaattgc gcgaacgcgt tttcactgta tcagtgccta cgctgagcct 841 acacgtgcca cgcagagcat tgcccataca tctcggcggt acactggaaa ttgagcataa 901 cacatggttg ctgcattgcc gcaaatcgat gacgaatcgt gaagacgagt tgctcgccaa 961 cattggtggt ttgtcagcgg caacagcggc gacagcggca gcaaatcaaa acagtttgag 1021 caaccaatca cacatcacaa acaccgtcgg agtggtggca aacggcgatt gtcaacgttt 1081 tctggcggaa cccaacgaaa atatcacaaa ccacagcaac aacacatcaa caacaactgc 1141 agcaacagca tcaccaacat cactgttaaa cggacatcat aataattcta gtagcatcgc 1201 agccgcgcca ttagtgccaa ttgccaacaa tttaaataat ctaaacaaca gtacgtcacc 1261 caataacgcc aaattgttgg cggtgggtct agctaacggc ggccttgtcg ccggcaccat 1321 tgtcaacggt gatctagtgc atacggcaac gtcgccgtcg tcctcctccg cttcctccac 1381 gcccttggtg gtgaacggca tcgttacggg tatcagcgcc ttaagtggta gtgccactgc 1441 tggttccggt ggtggtggcg gcggtgttgt tgttggccaa acaacaccga caaacaacac 1501 atcagcgaca aataacacag caacagcagc aggaacaaca acaacaacgg gtctcagtga 1561 tttctggaca gagaacccac caagtagtgc ctcgtcggga ttcagtgatg acgacagtct 1621 ggctggccaa gagggtgatc cgaaaacaat tgaacaaatt gttcaaatgg taaagacacg 1681 ggggcgtcag ggtctggtga aagaatatgc cgaaatccgc agtcgagccc cggatggcac 1741 gtttctacat gccagaatgc gcaataacgt gaccaaaaat cgctacacag atgttctttg 1801 ttatgaccac agtcgagttg ttctatcccg agtcggtggt gatgaggtat cggattatat 1861 aaatgccaat tttgtagatg gttacaaaca gaaaaatgca tacatttcaa ctcaaggccc 1921 attaccaaag acatcccaag atttctggcg catgatctgg gagcaacatt gtttagttat 1981 agttatgaca acacgtgtta tggaacgtgg acgcgttaaa tgcggtcaat attgggaacc 2041 agccgaaaat agttccttag aatttggaaa tttccatgtg cgaacactta gtatagaaac 2101 taatgaagat tatacagtag cctcattaga attgagaaat acaaagactg atgaagtaag 2161 aaatgtatca cattggcaat ttaccagctg gcccgattat ggtgtgccta gttctgctat 2221 ggccatgata acatttttac aaaaagtacg cgagaaacag gctcaaatgg tacaggcgct 2281 gggtgataca tgggctggac atcctagagg acccccaatt gttgtacatt gcagtgcggg 2341 tataggaaga acaggtacat ttataacttt ggacatttgc atatctcgtc tcgaggatgt 2401 tggtacggcc gatatacgtg gaactgtgga aaagatacgt gctcaacgtg catattcaat 2461 acaaatgccc gatcaatatg tattttgtca tttagcgtta attgaatatg cgatctcaag 2521 gggaatgtta aaggctgtcg atctggaggg tttcgatgac agagaagatg attccgaata 2581 aaatgggaaa tagtaacaac aaaaacaacc aactaacaac aataattaca acaaccaaca 2641 aatatataat ttgtttttaa ttcaaagaag gccaacacta ccaactacac caccaaaatc 2701 ctgtcaacaa aacaaacgga aaccataaaa tgaaatccac aacaatttta aacaaaaaaa 2761 gagtgttttt ctcttttttc aatacctaaa acaaagaaac acaggaagac agatcaacct 2821 acctaaaaga tatgatattt gtaaaactgt gaaatagttt cattcagttt catctttagg 2881 taatacaaaa aaaaaacaac cacaagcccc ctactactaa gtttgttatt atggtatttt 2941 gtttttctca atacaaaatc atttttttta tagtaaaaaa caaagaaaaa cctggaaaac 3001 caactcccta ctacttctac cactacacac ccacacacac acacacacta cgaaatagtt 3061 tacaatcaat taattttttg ttatttatta aaaaaaaaag aaaaaataaa tatatgtatg 3121 tattattgta atgtaaacac agaaataaaa aaagtctaaa caaaaataat ccatagctat 3181 tagttttggg ccccattata aaggacgatt cgttcatccc aacaagaagt tttgaaagcg 3241 tagtaacaaa ccatattttt ttttactttc gatgacagat agaaggacac tattgagaat 3301 agccgccatc aattaataat aaggcatata taagttatac aatcaaacaa acaacaacaa 3361 ctacaacaac aagaacctta atctgttttc acatgttttt atgtaatttg tggataataa 3421 tttatatatg taaagaaaac aaaaaaacaa acaaaacaaa ggacaatttt tataaaacaa 3481 aaacagcaaa cagccaagcc gattagaaga aaacccatat ttgcgtagtt tttagatcag 3541 tgatttgtag atgaaacaag agaaccaaca ttaacagtaa caaccaacgt agattcttat 3601 gttaattttt ttaatttaat tttttttttt aatcattaat gtttttttct gtttaactat 3661 tgctattatt acaaattaca aaaaaaaaaa tatatatata tatattattt aaatcgtaat 3721 ggaaaaaacc ccaataccca tacttgttgt cattaaaacc atcaaatgtg tggcaaaaca 3781 aaaacaaaaa aaaaacaact ggaaaagaga atgaatgcgg ttaaacaagc gatgatgaag 3841 agtatgaatg ttaattataa cgctaaattt aaattaaaat aatgataata ttatctatat 3901 atatatatat aaatatatta tacataactt aatataaacg aaataaaata aatttaatta 3961 ta