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LOCUS XM_059368155 3888 bp mRNA linear INV 02-SEP-2023 (LOC106086286), transcript variant X3, mRNA. ACCESSION XM_059368155 VERSION XM_059368155.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3888 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3888 /gene="LOC106086286" /note="uncharacterized LOC106086286; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins" /db_xref="GeneID:106086286" CDS 551..2776 /gene="LOC106086286" /codon_start=1 /product="uncharacterized protein LOC106086286 isoform X3" /protein_id="XP_059224138.1" /db_xref="GeneID:106086286" /translation="MSQFRDNSWLAGSRSKSVLKSLRCRSSGRSKSKCKSSVDLNKGM LGGDNASIASTSTSTYNDGCDGQEQGQNGFEELRRYVKQGGDFGKELIVILQERIDSE LLYSKSLSKMANKLNKACRELPGSIADAWRGVATEMETRSDIHRQLSASLAEEVVKPL KTIVEGHHKTRKSVESNVDKASRVLAEWRASEAKGKKSSHTAARENEKLQDAMLDVRI QKSPSIALLQQSVNKQAAEKEIKLAEKDCAKLDNKRKKAEEAVKKADVEYYTLCVRAE RARVDWEMAVLRGSSLLQNIENQRLINMKNFVSNYASLTANMNPIMESLVQRLQPQVE NCNVVKDMQIVKNIRRNAEGPSEQLLPDFYCEHTTLAMNRERRKHALIKLLQLVKTDL ERERRSRNGLKGLSQSLNSQEHQNITDKLYHIRSMLTYLEGARFKLHSALLELDHKPR SSHPLAQHIQITRDRTGLQQSILKVPLWLKNNDKLNNSQGSDETGNEYDTISQSNTTT STTNISCMDGIVSSHGNGSTDGSSYGMKNFNRSKSNIETFSNKRKISVNSTAAAPNAV NGKTKTLSGTTANLYDDTCSDDRGQADGGSNQQDSDFDEFSSQDEDEEAQLTSSTTVG VGGRKEHKANIEKSLSAENYYQNSTELKKQEQQQYTPNGLAENTGQGGLNTSNESSTH VILGRCKALYNYTPKLYDELELIPGDIIEVHAKQDDGWWLGALRNQVGIFPATYVEEI A" polyA_site 3888 /gene="LOC106086286" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgcgtatcgg taaggttttg cgcgcggagt ttttcgaatc gaagatcgaa tgaagcctaa 61 cgacgagtgt aaatgtctaa ttgctaagtt tttgtgttca ttatttgttt aacaagcaat 121 aatagatcga aaaaaataat tgtgaaaata atatgcaaaa aatatataat aattgctttg 181 cagtgatttc caagtaatta gaaaaataaa tgaaatttaa aaaaaggaat gaaatagaga 241 aataatttta agtcacctga tctttgtggc gttaattaat agtgactaaa aatatttgtt 301 agttgtgact accaagtaaa aagaaaaaaa aaacattttg aatagtttga gaaagtcaag 361 tgaacctact taaactatcg cttctttccc aaaaaaaaaa acaaaagtca atttgtcaac 421 ataagcggat tagttttgag cacaaaaaac cgcattgctc cagttcaagt cgattaaata 481 tttgtggatt aaattctgga tttgcgaaaa acacgaaata ttcagctgga gttaaaaaat 541 tgcaacaaca atgtcacaat ttcgtgataa ttcttggttg gccggttctc gctccaaatc 601 ggtgttgaaa agtttgcgtt gtcgttcatc gggtcgttca aaatccaagt gcaaatcctc 661 tgtggatttg aacaaaggta tgcttggagg cgacaatgct tctatagcat ccacttctac 721 ttcgacatat aacgatggtt gcgatgggca ggaacagggc caaaatggct ttgaagaatt 781 gcgtcgttat gttaagcagg gtggagattt tggtaaagaa ctcattgtca ttttacaaga 841 aagaatcgat tctgagcttt tgtattccaa atctttatcc aaaatggcca ataaattgaa 901 taaggcttgc cgtgaattgc ccggttccat agccgatgct tggaggggtg tagccaccga 961 aatggaaact cgcagtgata tacatcgcca actgtcggct tcattggccg aggaggtggt 1021 taagccctta aagaccatag tcgaaggaca tcacaagacc agaaaatcgg ttgaaagtaa 1081 tgtcgataag gcctctcgtg ttcttgctga atggcgtgcc agcgaagcta agggcaaaaa 1141 gtcatcacac actgctgctc gtgaaaatga gaagcttcaa gatgccatgc tggatgttag 1201 aatacaaaaa tcaccctcca tagccctact gcagcaaagc gtcaataagc aagccgccga 1261 aaaggagatc aaattggccg aaaaagattg tgcaaaactt gacaataaac gcaaaaaagc 1321 cgaggaggca gtcaaaaaag ccgacgtcga gtactacacc ctatgtgtga gagccgagcg 1381 ggcccgtgtc gattgggaaa tggccgtttt gaggggttca tctcttctac agaatatcga 1441 aaatcaacgt ttgataaata tgaaaaattt cgtctcgaac tatgcaagtc tcacggccaa 1501 tatgaatccc ataatggaga gtttggttca acgtctacag ccgcaggtgg aaaattgcaa 1561 tgtcgtcaag gatatgcaga ttgtgaaaaa tatacgccgc aatgccgaag gacccagtga 1621 acaattactg cccgatttct attgtgaaca caccacattg gccatgaatc gtgaaagacg 1681 taaacatgcc ttgatcaaac tcttgcaatt ggtcaaaaca gatttggaga gggagagacg 1741 ttctcgcaat ggcttaaagg gtctctcgca atctttgaac agtcaagagc atcagaatat 1801 cacagacaaa ttgtatcata tacgttcaat gcttacatat ttggaaggag cccgctttaa 1861 gctacattca gctttattgg aattggatca taaacctaga tcttcacatc ctttagctca 1921 acatatacag attacccgtg atcgcactgg tctacagcaa agcatactaa aggttccctt 1981 gtggcttaag aacaacgata aacttaacaa ttcccagggt agcgatgaaa ctggcaatga 2041 atacgacacc atatcacaga gcaacactac aacttcgaca acgaatatca gctgtatgga 2101 tggtattgtt agcagtcacg ggaatggctc gacggatggc agcagttatg gcatgaaaaa 2161 tttcaatcgc agcaaaagca atatcgaaac cttctccaat aaaaggaaga tcagtgtaaa 2221 ctctacggct gcagcaccca acgctgtaaa tggaaagact aaaacgttgt cgggaacaac 2281 tgcaaatctt tacgatgaca cttgcagcga tgatcgcggt caggctgatg gtggttcaaa 2341 tcaacaagac tccgactttg atgagttcag ctcccaggat gaggatgaag aggcacaact 2401 gacatcgtca actactgtgg gcgtaggtgg acgcaaggag cacaaagcca acattgaaaa 2461 atctctatcg gcagaaaatt attatcaaaa ctcgacggag cttaagaagc aggagcaaca 2521 acaatacaca ccaaatggcc tggcggagaa tactggacag ggcggcctta atacttccaa 2581 tgaatcttca acccacgtaa ttttaggtag atgtaaggct ctgtataatt acacacccaa 2641 attgtatgat gaactcgaat tgattcctgg cgatatcata gaagttcatg ccaaacaaga 2701 tgatggctgg tggttgggag cgttacgcaa ccaggtgggc atatttccgg ccacctatgt 2761 ggaggaaatc gcttgaagag taaagaaggc aaacttttat ttaagttatt gttcaaatta 2821 tcagaattag gaggttgaat ggaaaaatct ttaaaagatt tcttcgagcc atggaacctt 2881 tatccctcca aatgactgcc aatcactctt gtgtgtgtgt gtgtgtacta acgctgaagt 2941 agtgcctttt gttgttttct ctaggaaaac cttatctcat aaaggattat attcttcata 3001 tctcacaatc atttcacttg cagtgttttt ggagagggga attttttttt tttttttttg 3061 tttaaacaaa tcatatcgaa tgtaacttgt atgataaata gaaagcagag aagtagaaaa 3121 actcttcatc acattttctt acagtagttt catttagtaa aagaaacgaa ttaaattcgt 3181 cataaatttt tttaaatgct gaaatcttca ggactaaccc aagttaaaaa aagcaccgct 3241 cacatgtaac gctccacaca atttcaaatt cttgataacg cgtacatcac atgttttgtt 3301 attgttattg ataatattat tttacttttt tttaatgata agcttacact tttatttaaa 3361 tataacattg cgaacagttt atccttcgta tgtcttagtc tttatattta agttttcatt 3421 tagttttgtt ttcgttaaaa ttaaaattta ttatttatat gtcctatttt gtttattcat 3481 taatcattgt atgatgttct cgaaaaatgt tgtaaaatgt aacaaaacaa aaaatttaag 3541 caactcattt tatatgattg aatcctcctc ctctcctcag cataattttg ttatcgattc 3601 acaaggtttc gatttgctat aaagtgcgat tgattattca tgtcatttac tcacccattg 3661 cttattcatt ataaacgcaa taaaattatc cacttatatt tataaaaata tagattatac 3721 gaaattttaa tttaaagtaa aaaaaagaac aaaacaataa aaacatattc atacatacat 3781 cccttgttta agaaatcgaa cccagttgac aagagttggt cttctttctt tagagcatag 3841 gtacatatct cttgtaaata tttcaaataa aattgattaa atttaaaa