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PREDICTED: Stomoxys calcitrans alpha-tocopherol transfer


LOCUS       XM_059368137            1166 bp    mRNA    linear   INV 02-SEP-2023
            protein-like (LOC106094371), transcript variant X2, mRNA.
ACCESSION   XM_059368137
VERSION     XM_059368137.1
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1166
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1166
                     /gene="LOC106094371"
                     /note="alpha-tocopherol transfer protein-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:106094371"
     CDS             178..987
                     /gene="LOC106094371"
                     /codon_start=1
                     /product="alpha-tocopherol transfer protein-like isoform
                     X2"
                     /protein_id="XP_059224120.1"
                     /db_xref="GeneID:106094371"
                     /translation="MKGDVEKTKKLIEHNYYLRSKSPAIFFDRDPNEEVTKKSYFAVE
                     MVPLPGLTPEKYKVLCFRLVNKNPRTQNSIEESKSFFMMTDVRFTYNDLQENFDELGN
                     KDHDDKSDKHDIENEEQEEEDDLSSLANGEIHIVDIANYTLRHLASMSLMVMRTYMNY
                     LQEAYPVRLKAMHIINCPTHLNHMVAITKPFIREEVFNMIHFHIQGFETLYEHVPRNM
                     LPMDYGGKAKSLADITTQWWEIVKKNRAYIMNPKFWNVHKTEEVRSRWSWW"
     polyA_site      1166
                     /gene="LOC106094371"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 caatgatgtg gtgtatgggt ggcgctatag ttgtggctgt tttaataata tgacaccaat
       61 gaatttgcat tcgtgtccaa ctgattgtag acgtagtaaa acaatccaag tcaattttta
      121 ttaatctgac ctttaaatga attatatacc acatatttaa aacgctttct taaatgtatg
      181 aaaggtgatg tagaaaaaac caaaaagcta atagaacaca attactatct gagaagcaaa
      241 agtccagcca tattctttga ccgggatcca aatgaggaag taactaaaaa atcatatttt
      301 gcagtagaaa tggttccttt gccgggacta acgccggaaa agtacaaagt cttatgtttt
      361 cgccttgtca acaaaaatcc tcgaacgcaa aacagcatag aggagtccaa atcattcttt
      421 atgatgaccg atgttcgttt tacctacaat gatcttcagg aaaactttga tgagttagga
      481 aacaaagacc acgatgataa gagtgacaaa catgacattg aaaatgaaga acaagaagaa
      541 gaggacgatt tatcatcact ggctaatggg gaaatacaca tagtcgatat agccaattac
      601 acattaagac atctggcctc aatgtcgcta atggtaatgc gaacctatat gaattacctg
      661 caagaagcgt atccggtgag actgaaggca atgcacatca tcaattgtcc aacacattta
      721 aatcatatgg tggccataac aaaacctttc attagagagg aggtgtttaa tatgatacat
      781 ttccatattc agggctttga aaccctctac gaacatgttc ctcgcaatat gctgcccatg
      841 gattatggtg gcaaagccaa gagtttggct gacatcacca ctcaatggtg ggaaattgtc
      901 aaaaagaata gagcttatat catgaaccct aagttttgga acgttcataa aactgaagaa
      961 gttcgcagtc gttggtcatg gtggtgatga ttacttggag tattttattg ttaatattta
     1021 gttgttgtgc ttttgtgtga tttgtgattg atctctgcga actaaagtat tgaaagtaat
     1081 ctatcacaat gtttgaattt gtacttttac tcgttgtgcc atgtgataaa ataaacgtct
     1141 aaccactggc ccagccatgt agagga