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LOCUS XM_059368052 5403 bp mRNA linear INV 02-SEP-2023 variant X6, mRNA. ACCESSION XM_059368052 VERSION XM_059368052.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5403 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5403 /gene="LOC106096057" /note="mucin-5AC; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins" /db_xref="GeneID:106096057" CDS 831..3842 /gene="LOC106096057" /codon_start=1 /product="mucin-5AC" /protein_id="XP_059224035.1" /db_xref="GeneID:106096057" /translation="MYISNSSNIGMATLLQNNKNCMKTLTNGGATTGGNHIIVGNVVT SGVGSGSSSNNTTTLSSQVVGTIVSSGSNAANTTTTLVGANVGGGSGAGGPVTTLGGN VVIPAQTQTILLTNGATGASTIITYQQYQQLLQQQQQQQQQRLLVSQNLVNVPIGNIV STSNGGLAVITDSSNANNNNNQTSTSSSLSTTHQGTFLVTNSSTGVSQFQQHINANGV SVSGGNNNGSVVTSSAYLQPTQQQQARLITTNSGGGGGQTATIRHFSQFSQQQPATIV NNITNSNQSQPQRTTVLINRNNNTIIAGNATQRLQHATILTTTGAKTPTLIKTQQVLN AAGKGQIINVVKSPSAVAVAAAANANINAKNILTKPRTAITANLPQQQRFGTVTTANI QQLRPQQQQQLKIVKTQNIPQRATILNNIIPSSSTSSSTTTSSATATTLLNNSNLTKN HHFLNKTQITAASLSSATKTVVVSSPASLSLTSLPFSSSSSTSLSLKTTTVNANISSS APSSSSAAAAASTLTYTQQTAPLNQMNGHLINNFNKNPNKNTTTNLQQPASKLVPNGH IIHVTSNNHNTTSNYASTAAVSSSFAASTTTTPVVNSLSLSSYAATPFSSLSSSKSST TSTTTTTNLSVVAPNSNAAGTQNSNTPSLASISKSDTSIAAYTTTSPNNSVANNSSTE GVAPDSNATAVAAPEPEAEPEIDIVINNVVCSFSVRCHLNLREIALNGANVEYRRENG MVTMKLRRPYTTASIWSSGRITCTGATSEEQAKIAARRYARTLEKLGFRARFHNFRVV NVLGTCSMPWAIKIVNFSEKYREEASYEPELHPGVTYKLRYPKATLKIFSTGSITVTA ASVAHVQNAIEHIFPLVYEFRKKRSPEELEQLRLKQLQNATFEDIIEADETLGGSSAS GDFANSSKSLQRRRISNSFTKFPNAKRKRTQFTGGVVDVDDEEFDADDPDNTIIDGTG GGGGGDDDDDIVMYDPNESIIAGPEDEDDDL" polyA_site 5403 /gene="LOC106096057" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agaacaaaaa acaaccccaa caaaattctt gaggaaaaat agagtgatag aagaaatgtt 61 ggtattttcc ccgacttatt tagacattct tccagacgta cagaaatttt gcgccagttt 121 tttttttgaa attttacttt atttaaaagg aattataaga gactgtttct aaagaacaaa 181 tactaaataa aaagcaaaca aaaaacatct aaaccaaaac ctaaggagaa agaaacgaaa 241 gacttgaact acacaaatag gcaacaacaa aaacaaaaat ccaaaaatta ctacaacaaa 301 ccagcagtag cagcgtcaac aacaaaacta tattaaatgt ttctaaaaca acaaatgaat 361 atcaaaaaaa tattttcttg attttacaag aatagagagt agtggtgtgc caagagacag 421 agtttgagag acacaaagga agttagaaaa aggataagaa agtaccaaaa tattctctga 481 aagagagacc aggccacaaa gatttgtgac cttacgagac acatttatga aaggtcggtc 541 catcaaacag acagcaaaag caaatcaaac ggaatttgac atttcattta tcatcaaaca 601 acaaaaaagc atatcacatc tgccagagaa tattctagcc aaaacccaca aacgatagag 661 agtaagacga gcttcatcag aaggggagga acaacaatct acgtagtttt cctcctcctc 721 tggccacggc tgttttccat atgaagtgaa tcatttcttt cttctgatct gataatattg 781 ggggaaaaag aaatcaaaaa agcggaaaag gccaatatta agagcaacaa atgtatatta 841 gcaatagcag caacattggt atggccacgt tgttgcaaaa caataagaat tgcatgaaaa 901 ctttgacaaa tggcggagct acaactggtg gcaatcacat catcgttggc aatgttgtaa 961 ccagtggcgt tggcagcggt agcagcagca acaatactac cacactttca agccaggtgg 1021 tgggcactat agtgagttcg ggatcaaatg cagctaacac aactactacg ctagttgggg 1081 caaatgtagg cggtggcagt ggtgcagggg gtcctgtcac cacattgggt ggtaacgtag 1141 ttataccggc ccaaacgcaa accatattgt tgacaaatgg agcaacgggc gcctcgacca 1201 ttatcaccta ccagcaatat cagcagctgt tgcagcagca gcaacaacaa cagcagcaac 1261 gtttattggt ttcacaaaac ttagttaatg tacctatagg caatatagta agtaccagca 1321 atggcggatt ggcagttatt accgattcgt ctaatgccaa caacaacaac aaccagacaa 1381 gcacttcctc gtcgttgtcg acgacacatc aaggaacttt cttggttacc aactcctcaa 1441 cgggtgtgtc acaattccag caacatatta atgccaatgg tgtatctgtg tcaggaggta 1501 ataacaatgg ctctgtggta acctccagcg cctacttgca gcctactcag cagcaacaag 1561 cacgattgat tactaccaac tctggtggcg gtggtggtca aactgcaacg atacgtcatt 1621 tctcgcaatt ttcccagcaa cagcctgcca ccattgtaaa caatatcacc aacagtaatc 1681 agtcccagcc ccaacgcact acggttttga taaatcgcaa caacaacacg attattgctg 1741 gtaatgcaac acaacgttta caacatgcca ccatattaac aacaacggga gcgaaaacac 1801 caacactaat caaaacgcaa caggtgctga atgctgccgg caaaggtcaa atcataaatg 1861 ttgttaaaag cccctccgct gtagctgttg ccgccgccgc caacgctaat atcaatgcca 1921 agaatattct tacaaagccc agaacagcga taactgccaa cttgccccaa caacagcgtt 1981 ttggtaccgt caccaccgcc aacattcagc aattgagacc acagcaacag caacaattga 2041 aaattgtgaa aactcaaaac ataccacaac gtgccactat attaaataat ataataccgt 2101 cgtcgtctac gtcgtcgtcg acaactacat cttctgctac agcaacaaca ctcctgaata 2161 acagcaattt aaccaaaaat catcattttt taaataaaac tcaaataacg gctgcgtcgt 2221 tgtcttcagc aactaaaacc gttgtagtat cttcgccagc ttccttatca ttaacttcat 2281 taccattttc gtcgtcatca tcgacatctt tgtcattgaa gacaaccaca gttaatgcta 2341 acatctcatc atccgcccca tcgtcatcat ccgccgccgc cgccgcttcc accttaactt 2401 atacgcaaca aactgcacca ctgaatcaaa tgaatggaca tttgataaat aattttaata 2461 agaatccaaa taaaaacaca acaacaaatt tgcaacaacc cgcctctaaa ttagttccta 2521 atggccatat aatccatgtt acatcaaata accacaacac caccagtaac tatgcatcaa 2581 cagctgcagt atcctcatca tttgcagcct ccaccacaac tactccagta gtgaattctc 2641 ttagtttgtc ctcttatgct gcaacgccat tctcttcatt gtcgtcatcc aagtctagta 2701 caacatccac tactaccacc acaaatctat cagtggtagc tcccaactcc aatgccgcag 2761 gaacacaaaa cagcaatacc ccatcattag cttcaataag taaaagtgat acttcgattg 2821 ctgcctacac aacaacgtca cccaacaata gtgtagcaaa taatagcagt acagaaggtg 2881 ttgccccaga ttcgaatgca acagcagtag ctgccccgga accggaagct gaacccgaaa 2941 ttgatattgt cattaacaat gttgtatgtt ccttcagtgt tcgttgtcat ttaaatttgc 3001 gtgaaattgc tttgaatggt gcaaatgtag aatatcgacg agaaaatggc atggtaacaa 3061 tgaaattacg tcgtccttat acaacagcct ctatttggtc ctcgggtaga ataacatgca 3121 ctggagccac ttctgaggaa caggcaaaaa tagcagcacg tcgttatgct cgtactttgg 3181 agaaattggg ttttcgagct cgttttcata atttccgcgt ggttaatgtt ttgggcactt 3241 gcagcatgcc ttgggccata aaaatagtaa atttttccga aaaatatcgg gaagaggcaa 3301 gctatgaacc tgaattacat cctggcgtaa catacaagct ccgttatccc aaagccacat 3361 taaaaatatt ctctacgggc agtataacag ttactgctgc tagtgttgca catgttcaaa 3421 acgccattga acatatattc ccgcttgtct atgagttccg caagaaacgt tcccccgaag 3481 agttggaaca gcttcgtctg aaacaactac aaaatgcaac atttgaagat attattgaag 3541 ctgatgagac attaggcggg tcaagtgcga gtggagattt tgcaaattct tcaaaatctc 3601 tgcaacgccg acgtatttcg aattcattca ctaaatttcc caatgccaaa agaaaacgta 3661 cccaattcac tggtggagtt gttgatgttg acgatgagga atttgatgct gatgatcctg 3721 ataatacaat aatagatggt actggtggtg gtggtggcgg tgatgatgac gacgatattg 3781 ttatgtatga tcccaacgaa tcaattatag ctggtcctga agatgaagac gatgatttgt 3841 aagaatatat tgaatatata tacatatata taaaagtata cttcgtatat aatatacata 3901 catacatata tacataccaa tatgtattgc atactaagaa gaatcactca tatagattca 3961 caacccatcg ccccacaccc cccagatgga atttattttg gggagggggc gtggtgcaaa 4021 tgttcgtttt taaaagcata tctttaataa agcctagaaa acaaaccaag caaacaacca 4081 aacaaacaaa ccacatatat gccgattatg agttagaaga accaaatgac aatttatatc 4141 atttgttaag gcggagaaga atcatcgata tgtcaactcc accacaatca acacgaccat 4201 catcattcag cttctccaaa tgtatcacat catgtatcaa agcatctgta acgcatctat 4261 acaatatttg aagcaacaaa taaatcaaat cgacttttta ttatatataa ttaataatct 4321 agtgaaattt agagccaaaa atttaatgca aatgcaaact tttaatttta agatgtttta 4381 taaactgctg ccagtgtgtg cttttttgtt tttcaacaac tacaacaaca acaacaatta 4441 gaaattaaat agcatattat ttatctcgtt ttatgtgagt catacaacaa caaaacaacc 4501 aacaatcaat caatcaccta caatacaagc aacaacaaac aacataaaaa aaacaacaac 4561 aatagatttt aaaaaagacc tacaaacaac aaagaaagaa aacctagtat actataagaa 4621 gcaacaaaat cctaaaacaa ttcaacaaca acaacaataa caatatgaag ttaattataa 4681 ttttcacatt gtcgtcttgt aattcatcaa cttgcgatta ttattattat cattattatt 4741 attattatat gattagaatt atcattatta ttatttcttc aaaggaaacc accgcctttt 4801 tatttaaaca aattaattaa ttgaaactgt tcgtaatatt aacaaagaag agaaacaaca 4861 aacaaaataa aaacaaaata attttaattt taagtgtttt ctgttataat tataacaaaa 4921 aaaaagagaa agagaaaaag aagaagattt agtaacagtg gaaatggaaa ttgtgttata 4981 tttttaatgt tctctaaaca cacacacaca catacccaca ctcgtatcca agcaaagtga 5041 ataaagaaac atttttgttt tgtttatttt tattattatt taaaaatttt ttcgttgtgg 5101 aaagaattca tcacttttca attattaatt tctatgcaaa gaaagaaaaa acgttatttg 5161 tttttttttt aacattttaa atttctttat gtatatgctg ctctgcacac actacctaca 5221 actctctact gtatctggtc acttgaaaac caatttttat tttataaata cacaaaatta 5281 tttcatctta tgaaaaacca agcttaagct aggcatgtta atttaaatac aaaacttaca 5341 aataaaaaaa aacaaccaat tcgtttagtt tgtgaaatac acacaatcaa cttttaaact 5401 taa