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LOCUS XM_059368049 6259 bp mRNA linear INV 02-SEP-2023 variant X3, mRNA. ACCESSION XM_059368049 VERSION XM_059368049.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6259 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..6259 /gene="LOC106096057" /note="mucin-5AC; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins" /db_xref="GeneID:106096057" CDS 1687..4698 /gene="LOC106096057" /codon_start=1 /product="mucin-5AC" /protein_id="XP_059224032.1" /db_xref="GeneID:106096057" /translation="MYISNSSNIGMATLLQNNKNCMKTLTNGGATTGGNHIIVGNVVT SGVGSGSSSNNTTTLSSQVVGTIVSSGSNAANTTTTLVGANVGGGSGAGGPVTTLGGN VVIPAQTQTILLTNGATGASTIITYQQYQQLLQQQQQQQQQRLLVSQNLVNVPIGNIV STSNGGLAVITDSSNANNNNNQTSTSSSLSTTHQGTFLVTNSSTGVSQFQQHINANGV SVSGGNNNGSVVTSSAYLQPTQQQQARLITTNSGGGGGQTATIRHFSQFSQQQPATIV NNITNSNQSQPQRTTVLINRNNNTIIAGNATQRLQHATILTTTGAKTPTLIKTQQVLN AAGKGQIINVVKSPSAVAVAAAANANINAKNILTKPRTAITANLPQQQRFGTVTTANI QQLRPQQQQQLKIVKTQNIPQRATILNNIIPSSSTSSSTTTSSATATTLLNNSNLTKN HHFLNKTQITAASLSSATKTVVVSSPASLSLTSLPFSSSSSTSLSLKTTTVNANISSS APSSSSAAAAASTLTYTQQTAPLNQMNGHLINNFNKNPNKNTTTNLQQPASKLVPNGH IIHVTSNNHNTTSNYASTAAVSSSFAASTTTTPVVNSLSLSSYAATPFSSLSSSKSST TSTTTTTNLSVVAPNSNAAGTQNSNTPSLASISKSDTSIAAYTTTSPNNSVANNSSTE GVAPDSNATAVAAPEPEAEPEIDIVINNVVCSFSVRCHLNLREIALNGANVEYRRENG MVTMKLRRPYTTASIWSSGRITCTGATSEEQAKIAARRYARTLEKLGFRARFHNFRVV NVLGTCSMPWAIKIVNFSEKYREEASYEPELHPGVTYKLRYPKATLKIFSTGSITVTA ASVAHVQNAIEHIFPLVYEFRKKRSPEELEQLRLKQLQNATFEDIIEADETLGGSSAS GDFANSSKSLQRRRISNSFTKFPNAKRKRTQFTGGVVDVDDEEFDADDPDNTIIDGTG GGGGGDDDDDIVMYDPNESIIAGPEDEDDDL" polyA_site 6259 /gene="LOC106096057" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tttatataca ctgagagaga aaaagaggca catcaaaaga gagagagaga ttaaaaagaa 61 atattaaatc tttgcaacat ttcgaaatgc aattaacaaa ataataaatg attttaaacg 121 aaacacgtct attatgcaaa ttatgaatta ttattttctt caattctatt ttcatttgac 181 gaaatgaaat tacacacact acaatttact acagagagag cacacacacg catagtaggg 241 atcagagtta agcaataaaa aaattttttc ttaataattt caagtgttta ataaaatatt 301 aaattattct taaacaattt cgtttttttt tgtttgtaaa accgtatgga agaaatttat 361 tcaatggcaa agcaaaggag aaaaatcact taatttttta tatttcgaac ggatgaataa 421 taataataaa aagaagaagc agcattagtt aaatagcaag acatttcgtt cggtcggttt 481 ttttcgaatc gcgtatattt gctgtctgtg gtgttgtgct tgcttttgtg tcttcgcacg 541 gtcgcgtaac gccgctgagg caaaaattca actgtctaac aaagtaaacg ctcgtttctt 601 cgttgctcgt taatgtgata gagtatttac tctcgtatga aacggtaaaa acaagaacaa 661 cacagccgat ttgtcagacg caagtgtgtg tgcgcgtgtg tcaatgtgcg ttgtgtgtgt 721 gtgaattata aagaacgaaa acttgccgag accgccacaa caacataaag aaatacctat 781 ttaaaaaaga ttaagattgt tttaatttac taactaatga agcctaaata aaaacttcga 841 attgaaatac aaacaagaac aaggcgttgg acttcattta aaaaccttga ggaaattgta 901 ctctaaacga gactggcgga gattgcaagt gctaatatta tacctaacca gcattaaaag 961 aattttgcgc cagttttttt tttgaaattt tactttattt aaaaggaatt ataagagact 1021 gtttctaaag aacaaatact aaataaaaag caaacaaaaa acatctaaac caaaacctaa 1081 ggagaaagaa acgaaagact tgaactacac aaataggcaa caacaaaaac aaaaatccaa 1141 aaattactac aacaaaccag cagtagcagc gtcaacaaca aaactatatt aaatgtttct 1201 aaaacaacaa atgaatatca aaaaaatatt ttcttgattt tacaagaata gagagtagtg 1261 gtgtgccaag agacagagtt tgagagacac aaaggaagtt agaaaaagga taagaaagta 1321 ccaaaatatt ctctgaaaga gagaccaggc cacaaagatt tgtgacctta cgagacacat 1381 ttatgaaagg tcggtccatc aaacagacag caaaagcaaa tcaaacggaa tttgacattt 1441 catttatcat caaacaacaa aaaagcatat cacatctgcc agagaatatt ctagccaaaa 1501 cccacaaacg atagagagta agacgagctt catcagaagg ggaggaacaa caatctacgt 1561 agttttcctc ctcctctggc cacggctgtt ttccatatga agtgaatcat ttctttcttc 1621 tgatctgata atattggggg aaaaagaaat caaaaaagcg gaaaaggcca atattaagag 1681 caacaaatgt atattagcaa tagcagcaac attggtatgg ccacgttgtt gcaaaacaat 1741 aagaattgca tgaaaacttt gacaaatggc ggagctacaa ctggtggcaa tcacatcatc 1801 gttggcaatg ttgtaaccag tggcgttggc agcggtagca gcagcaacaa tactaccaca 1861 ctttcaagcc aggtggtggg cactatagtg agttcgggat caaatgcagc taacacaact 1921 actacgctag ttggggcaaa tgtaggcggt ggcagtggtg cagggggtcc tgtcaccaca 1981 ttgggtggta acgtagttat accggcccaa acgcaaacca tattgttgac aaatggagca 2041 acgggcgcct cgaccattat cacctaccag caatatcagc agctgttgca gcagcagcaa 2101 caacaacagc agcaacgttt attggtttca caaaacttag ttaatgtacc tataggcaat 2161 atagtaagta ccagcaatgg cggattggca gttattaccg attcgtctaa tgccaacaac 2221 aacaacaacc agacaagcac ttcctcgtcg ttgtcgacga cacatcaagg aactttcttg 2281 gttaccaact cctcaacggg tgtgtcacaa ttccagcaac atattaatgc caatggtgta 2341 tctgtgtcag gaggtaataa caatggctct gtggtaacct ccagcgccta cttgcagcct 2401 actcagcagc aacaagcacg attgattact accaactctg gtggcggtgg tggtcaaact 2461 gcaacgatac gtcatttctc gcaattttcc cagcaacagc ctgccaccat tgtaaacaat 2521 atcaccaaca gtaatcagtc ccagccccaa cgcactacgg ttttgataaa tcgcaacaac 2581 aacacgatta ttgctggtaa tgcaacacaa cgtttacaac atgccaccat attaacaaca 2641 acgggagcga aaacaccaac actaatcaaa acgcaacagg tgctgaatgc tgccggcaaa 2701 ggtcaaatca taaatgttgt taaaagcccc tccgctgtag ctgttgccgc cgccgccaac 2761 gctaatatca atgccaagaa tattcttaca aagcccagaa cagcgataac tgccaacttg 2821 ccccaacaac agcgttttgg taccgtcacc accgccaaca ttcagcaatt gagaccacag 2881 caacagcaac aattgaaaat tgtgaaaact caaaacatac cacaacgtgc cactatatta 2941 aataatataa taccgtcgtc gtctacgtcg tcgtcgacaa ctacatcttc tgctacagca 3001 acaacactcc tgaataacag caatttaacc aaaaatcatc attttttaaa taaaactcaa 3061 ataacggctg cgtcgttgtc ttcagcaact aaaaccgttg tagtatcttc gccagcttcc 3121 ttatcattaa cttcattacc attttcgtcg tcatcatcga catctttgtc attgaagaca 3181 accacagtta atgctaacat ctcatcatcc gccccatcgt catcatccgc cgccgccgcc 3241 gcttccacct taacttatac gcaacaaact gcaccactga atcaaatgaa tggacatttg 3301 ataaataatt ttaataagaa tccaaataaa aacacaacaa caaatttgca acaacccgcc 3361 tctaaattag ttcctaatgg ccatataatc catgttacat caaataacca caacaccacc 3421 agtaactatg catcaacagc tgcagtatcc tcatcatttg cagcctccac cacaactact 3481 ccagtagtga attctcttag tttgtcctct tatgctgcaa cgccattctc ttcattgtcg 3541 tcatccaagt ctagtacaac atccactact accaccacaa atctatcagt ggtagctccc 3601 aactccaatg ccgcaggaac acaaaacagc aataccccat cattagcttc aataagtaaa 3661 agtgatactt cgattgctgc ctacacaaca acgtcaccca acaatagtgt agcaaataat 3721 agcagtacag aaggtgttgc cccagattcg aatgcaacag cagtagctgc cccggaaccg 3781 gaagctgaac ccgaaattga tattgtcatt aacaatgttg tatgttcctt cagtgttcgt 3841 tgtcatttaa atttgcgtga aattgctttg aatggtgcaa atgtagaata tcgacgagaa 3901 aatggcatgg taacaatgaa attacgtcgt ccttatacaa cagcctctat ttggtcctcg 3961 ggtagaataa catgcactgg agccacttct gaggaacagg caaaaatagc agcacgtcgt 4021 tatgctcgta ctttggagaa attgggtttt cgagctcgtt ttcataattt ccgcgtggtt 4081 aatgttttgg gcacttgcag catgccttgg gccataaaaa tagtaaattt ttccgaaaaa 4141 tatcgggaag aggcaagcta tgaacctgaa ttacatcctg gcgtaacata caagctccgt 4201 tatcccaaag ccacattaaa aatattctct acgggcagta taacagttac tgctgctagt 4261 gttgcacatg ttcaaaacgc cattgaacat atattcccgc ttgtctatga gttccgcaag 4321 aaacgttccc ccgaagagtt ggaacagctt cgtctgaaac aactacaaaa tgcaacattt 4381 gaagatatta ttgaagctga tgagacatta ggcgggtcaa gtgcgagtgg agattttgca 4441 aattcttcaa aatctctgca acgccgacgt atttcgaatt cattcactaa atttcccaat 4501 gccaaaagaa aacgtaccca attcactggt ggagttgttg atgttgacga tgaggaattt 4561 gatgctgatg atcctgataa tacaataata gatggtactg gtggtggtgg tggcggtgat 4621 gatgacgacg atattgttat gtatgatccc aacgaatcaa ttatagctgg tcctgaagat 4681 gaagacgatg atttgtaaga atatattgaa tatatataca tatatataaa agtatacttc 4741 gtatataata tacatacata catatataca taccaatatg tattgcatac taagaagaat 4801 cactcatata gattcacaac ccatcgcccc acacccccca gatggaattt attttgggga 4861 gggggcgtgg tgcaaatgtt cgtttttaaa agcatatctt taataaagcc tagaaaacaa 4921 accaagcaaa caaccaaaca aacaaaccac atatatgccg attatgagtt agaagaacca 4981 aatgacaatt tatatcattt gttaaggcgg agaagaatca tcgatatgtc aactccacca 5041 caatcaacac gaccatcatc attcagcttc tccaaatgta tcacatcatg tatcaaagca 5101 tctgtaacgc atctatacaa tatttgaagc aacaaataaa tcaaatcgac tttttattat 5161 atataattaa taatctagtg aaatttagag ccaaaaattt aatgcaaatg caaactttta 5221 attttaagat gttttataaa ctgctgccag tgtgtgcttt tttgtttttc aacaactaca 5281 acaacaacaa caattagaaa ttaaatagca tattatttat ctcgttttat gtgagtcata 5341 caacaacaaa acaaccaaca atcaatcaat cacctacaat acaagcaaca acaaacaaca 5401 taaaaaaaac aacaacaata gattttaaaa aagacctaca aacaacaaag aaagaaaacc 5461 tagtatacta taagaagcaa caaaatccta aaacaattca acaacaacaa caataacaat 5521 atgaagttaa ttataatttt cacattgtcg tcttgtaatt catcaacttg cgattattat 5581 tattatcatt attattatta ttatatgatt agaattatca ttattattat ttcttcaaag 5641 gaaaccaccg cctttttatt taaacaaatt aattaattga aactgttcgt aatattaaca 5701 aagaagagaa acaacaaaca aaataaaaac aaaataattt taattttaag tgttttctgt 5761 tataattata acaaaaaaaa agagaaagag aaaaagaaga agatttagta acagtggaaa 5821 tggaaattgt gttatatttt taatgttctc taaacacaca cacacacata cccacactcg 5881 tatccaagca aagtgaataa agaaacattt ttgttttgtt tatttttatt attatttaaa 5941 aattttttcg ttgtggaaag aattcatcac ttttcaatta ttaatttcta tgcaaagaaa 6001 gaaaaaacgt tatttgtttt ttttttaaca ttttaaattt ctttatgtat atgctgctct 6061 gcacacacta cctacaactc tctactgtat ctggtcactt gaaaaccaat ttttatttta 6121 taaatacaca aaattatttc atcttatgaa aaaccaagct taagctaggc atgttaattt 6181 aaatacaaaa cttacaaata aaaaaaaaca accaattcgt ttagtttgtg aaatacacac 6241 aatcaacttt taaacttaa